MELO3C029051 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029051
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Oxidative stress 3
Location	chr01: 17052035 .. 17052838 (-)
RNA-Seq Expression	MELO3C029051
Synteny	MELO3C029051

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCCTTTCTCTATATAATTATTGCAAAAATGGAAGATAAAGGAAACAACATGATGGCTTTTGATATGGGTTCTCTTAGAACAAATCTTCCTCAAAAGTAAGCAATTCATCCATATATGTTTTTCTCCATTTTTGGCCAATTATGTCTCTAACTTTTCACTATTCAAATATTCCTTTTTTGTTTGAATGTATTTTGAGTAGACTTTTATAGAGTTTATGTAATAATTAAATTACAGTTTGCCACGTGACGATTTTTTGAATTAGTTTGATACTTAAATTTTACGTTTAAAGGATGATATATTGGATGGTTAATTATTGTAGTGATTTAGTTTTTCATTTTTTTATATTTAATTTTGTCTACATATATTATTATATAAATTTTACTCCAATAAATTAGAAAACGAATTATCAGAAGTATTAGTAATTTGATAATAATGTTTTTTAAGATTTATAAGTTTAACTTTTTCAAGTTTTCAAAACATGGCTTCGTCGTTTCTAATAACATTTTTCAAAAGAGATAGCAAAATAAAAAAAAATAAAAAAAAAACCGATGAAAAGTAGTGTTTTCACACAACCAACACCATAAAACGAAGAAAAAGTTGTGCATTTTGATCATTTATAACAATGTTATTTTTTGGTGTTTTGAGTATGTGTAGGAGGGGTTTATCGAGATACTATTCTGGAAAAGCGAGATCATTTGCTTGCATAGCCGACGTTCGAAGTGTAGAAGATTTGAAGAAACCAAAACATCCGGATGCTAAGAAAAGGAAGAAACATTCTGATTGCAAAGAAATAACTAATGT

mRNA sequence

CCTCCCTTTCTCTATATAATTATTGCAAAAATGGAAGATAAAGGAAACAACATGATGGCTTTTGATATGGGTTCTCTTAGAACAAATCTTCCTCAAAAGAGGGGTTTATCGAGATACTATTCTGGAAAAGCGAGATCATTTGCTTGCATAGCCGACGTTCGAAGTGTAGAAGATTTGAAGAAACCAAAACATCCGGATGCTAAGAAAAGGAAGAAACATTCTGATTGCAAAGAAATAACTAATGT

Coding sequence (CDS)

ATGGAAGATAAAGGAAACAACATGATGGCTTTTGATATGGGTTCTCTTAGAACAAATCTTCCTCAAAAGAGGGGTTTATCGAGATACTATTCTGGAAAAGCGAGATCATTTGCTTGCATAGCCGACGTTCGAAGTGTAGAAGATTTGAAGAAACCAAAACATCCGGATGCTAAGAAAAGGAAGAAACATTCTGATTGCAAAGAAATAACTAAT

Protein sequence

MEDKGNNMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCKEITN

Homology

[Close]

BLAST of MELO3C029051 vs. NCBI nr
Match: KGN43154.1 (hypothetical protein Csa_020555 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MEDKGNNMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKR 60
          MEDKGN+MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKR
Sbjct: 1  MEDKGNSMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKR 60

Query: 61 KKHSDCKEI 70
          KKHSD KEI
Sbjct: 61 KKHSDIKEI 69

[Close]

BLAST of MELO3C029051 vs. NCBI nr
Match: KAA0033797.1 (hypothetical protein E6C27_scaffold142G00550 [Cucumis melo var. makuwa] >TYK22337.1 hypothetical protein E5676_scaffold1428G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 3.2e-27
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 8  MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCK 67
          MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCK
Sbjct: 1  MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCK 60

Query: 68 EITN 72
          EITN
Sbjct: 61 EITN 64

[Close]

BLAST of MELO3C029051 vs. NCBI nr
Match: KAG6588432.1 (hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24
Identity = 60/69 (86.96%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MEDKGNNMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKR 60
          M+D+GNNMMAFDM SL  NLPQKRGLSRYYSGKARSFACIAD R VEDLKKP HPDAKKR
Sbjct: 1  MKDQGNNMMAFDMSSLGANLPQKRGLSRYYSGKARSFACIADARCVEDLKKPTHPDAKKR 60

Query: 61 KKHSDCKEI 70
          KKHSDCK I
Sbjct: 61 KKHSDCKGI 69

[Close]

BLAST of MELO3C029051 vs. NCBI nr
Match: TQE06317.1 (hypothetical protein C1H46_008086 [Malus baccata])

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-20
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 4  KGNNMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKH 63
          +G NM AFDMG+LRT LPQKRGLSRYYSGK+RSF C+ADVRSVEDLKKP++PDAKKRKKH
Sbjct: 2  EGENMRAFDMGALRTGLPQKRGLSRYYSGKSRSFTCMADVRSVEDLKKPENPDAKKRKKH 61

Query: 64 SDCK 68
          S+ K
Sbjct: 62 SERK 65

[Close]

BLAST of MELO3C029051 vs. NCBI nr
Match: ONH91050.1 (hypothetical protein PRUPE_8G090300 [Prunus persica])

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 4  KGNNMMAFDMGSLRTNLPQKR-GLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKK 63
          +G+NM AFDMG+LRTNLPQKR GLSRYYSGK+RSF C+ DVRSVEDLKKP+HPDAKKRKK
Sbjct: 2  EGDNMRAFDMGTLRTNLPQKRSGLSRYYSGKSRSFTCMDDVRSVEDLKKPEHPDAKKRKK 61

Query: 64 HSDCK 68
          HS+ K
Sbjct: 62 HSERK 66

[Close]

BLAST of MELO3C029051 vs. ExPASy TrEMBL
Match: A0A0A0K2B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004070 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.2e-29
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MEDKGNNMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKR 60
          MEDKGN+MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKR
Sbjct: 1  MEDKGNSMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKR 60

Query: 61 KKHSDCKEI 70
          KKHSD KEI
Sbjct: 61 KKHSDIKEI 69

[Close]

BLAST of MELO3C029051 vs. ExPASy TrEMBL
Match: A0A5A7SX13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00540 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 8  MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCK 67
          MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCK
Sbjct: 1  MMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKHSDCK 60

Query: 68 EITN 72
          EITN
Sbjct: 61 EITN 64

[Close]

BLAST of MELO3C029051 vs. ExPASy TrEMBL
Match: A0A540N5I5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_008086 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-20
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 4  KGNNMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKKH 63
          +G NM AFDMG+LRT LPQKRGLSRYYSGK+RSF C+ADVRSVEDLKKP++PDAKKRKKH
Sbjct: 2  EGENMRAFDMGALRTGLPQKRGLSRYYSGKSRSFTCMADVRSVEDLKKPENPDAKKRKKH 61

Query: 64 SDCK 68
          S+ K
Sbjct: 62 SERK 65

[Close]

BLAST of MELO3C029051 vs. ExPASy TrEMBL
Match: M5VHW2 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G090300 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.3e-20
Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 4  KGNNMMAFDMGSLRTNLPQKR-GLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRKK 63
          +G+NM AFDMG+LRTNLPQKR GLSRYYSGK+RSF C+ DVRSVEDLKKP+HPDAKKRKK
Sbjct: 2  EGDNMRAFDMGTLRTNLPQKRSGLSRYYSGKSRSFTCMDDVRSVEDLKKPEHPDAKKRKK 61

Query: 64 HSDCK 68
          HS+ K
Sbjct: 62 HSERK 66

[Close]

BLAST of MELO3C029051 vs. ExPASy TrEMBL
Match: A0A061E0R1 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_006830 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 1  MEDKGNNMMAFDMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKR 60
          MED+     AFDMG+LR+NLPQKRGLSRYYSGKARSFACIADVR VEDLKK +HPDAKKR
Sbjct: 1  MEDQ-TEKRAFDMGALRSNLPQKRGLSRYYSGKARSFACIADVRCVEDLKKQEHPDAKKR 60

Query: 61 KKHSDCKEI 70
          KK+S+ KE+
Sbjct: 61 KKYSNKKEM 68

[Close]

BLAST of MELO3C029051 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 )

HSP 1 Score: 47.8 bits (112), Expect = 4.3e-06
Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 0


Query: 12  DMGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKK 52
           D+  L ++LP KRGLS++Y GK++SF  + +V+S+EDL K
Sbjct: 77  DLSDLMSHLPIKRGLSKFYEGKSQSFTSLGNVKSLEDLMK 116

[Close]

BLAST of MELO3C029051 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 9.7e-06
Identity = 21/49 (42.86%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 13  MGSLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRK 62
           M SL  +LP KRGLS +Y GK++SF  + ++ SV+++ K ++P  K+R+
Sbjct: 98  MSSLEDSLPSKRGLSNHYKGKSKSFGNLGEIGSVKEVAKQENPLNKRRR 146

[Close]

BLAST of MELO3C029051 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 8.2e-05
Identity = 20/51 (39.22%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 23  KRGLSRYYSGKARSFACIADVRSVEDLKKPKHP---DAKKRKKHSDCKEIT 71
           +RGLS++Y GK++SF  +A+  +VEDL KP++P     K+R++   C+ ++
Sbjct: 56  RRGLSKHYKGKSQSFTTLAEALTVEDLAKPENPFNAKLKQRRESPHCRRLS 106

[Close]

BLAST of MELO3C029051 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 3.1e-04
Identity = 21/57 (36.84%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 13  MGSLRTNLPQKRGLSRYYSGKARSF--------ACIADVRSVEDLKKPKHPDAKKRK 62
           M SL   LP ++G+S+YYSGK++SF        + +    S++DL KP++P +++R+
Sbjct: 78  MESLEQVLPVRKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRR 134

[Close]

BLAST of MELO3C029051 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 40.0 bits (92), Expect = 9.1e-04
Identity = 20/47 (42.55%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 15  SLRTNLPQKRGLSRYYSGKARSFACIADVRSVEDLKKPKHPDAKKRK 62
           SL  +LP KRGLS +Y GK++SF  + +  +  DL K + P  K+R+
Sbjct: 75  SLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTNDLVKVESPLNKRRR 121

The following BLAST results are available for this feature:

BLAST of MELO3C029051 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43154.1	1.7e-28	97.10	hypothetical protein Csa_020555 [Cucumis sativus]	[more]
KAA0033797.1	3.2e-27	100.00	hypothetical protein E6C27_scaffold142G00550 [Cucumis melo var. makuwa] >TYK2233...	[more]
KAG6588432.1	1.1e-24	86.96	hypothetical protein SDJN03_16997, partial [Cucurbita argyrosperma subsp. sorori...	[more]
TQE06317.1	3.8e-20	81.25	hypothetical protein C1H46_008086 [Malus baccata]	[more]
ONH91050.1	1.1e-19	81.54	hypothetical protein PRUPE_8G090300 [Prunus persica]	[more]

BLAST of MELO3C029051 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C029051 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2B1	8.2e-29	97.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004070 PE=4 SV=1	[more]
A0A5A7SX13	1.6e-27	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A540N5I5	1.8e-20	81.25	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_008086 PE=4 SV=1	[more]
M5VHW2	5.3e-20	81.54	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G090300 PE=4 SV=1	[more]
A0A061E0R1	1.6e-19	78.26	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_006830 PE=4 SV=1	[more]

BLAST of MELO3C029051 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56550.1	4.3e-06	50.00	oxidative stress 3	[more]
AT5G24890.1	9.7e-06	42.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G03170.1	8.2e-05	39.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G21940.1	3.1e-04	36.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G31510.1	9.1e-04	42.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..71
None	No IPR available	PANTHER	PTHR33172:SF38	BNAA01G05330D PROTEIN	coord: 4..69
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 4..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029051.1	MELO3C029051.1	mRNA