Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTCTACAAGTGGGATTGATGTCCTGATGAAAATGGTAGAGAAGATTGAGAATAGCCAAAAAAGGATGGAGACAAGTGTGGAAGGTATTCTTGAGTTTCTTAAATCTGTAGAATTGAAAATGAATAACCGATTTGAAGAACTAAGGCAGAAGATGAATGGAATAATAGAAGCAATAAAGAGCCAACAACGTAGTTCTTCGGGTGGCCAATACACTCATAAATTTATGGTAAGCATATTGTGTAGACTTTAATAATCTGTGTGCATGAATTTAAATCTTAACAAATACAGTGTATCTGGTTTGTATTTGTTGCGCAGGGAGCAAGGGCGTTTGAAGAGCACCTTGAGAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTAAACATTTGAACTTGAATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACGATGAAGACAAAGACGAAAAAGGGCTTACGGATGAAAGTCGAGCAGAAAGTTCGAGAGGACAAGATGGTGGTCAATCTAAAGTGGCAAAATTAGAGACACCACCAACAACCGGAGATAAAGATTCTTCGCTGTATAAGGTAAAGAAAAAATGAAAATGTTGAAGATATGTATAATACATATTATAGACTAATATATTTACATACTTGTAATAGACCACGGAGGAAACAGATGAGGAGATAAACAGGCTGATACGGTCAATCGATGAAAGTGTTATATATGACGAGATCAAGAAGAAAGAACACAGGAGAAGAATGGCATAG
mRNA sequence
ATGCCCTCTACAAGTGGGATTGATGTCCTGATGAAAATGGTAGAGAAGATTGAGAATAGCCAAAAAAGGATGGAGACAAGTGTGGAAGGCAGAAGATGAATGGAATAATAGAAGCAATAAAGAGCCAACAACGTAGTTCTTCGGGTGGCCAATACACTCATAAATTTATGGGAGCAAGGGCGTTTGAAGAGCACCTTGAGAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTAAACATTTGAACTTGAATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACGATGAAGACAAAGACGAAAAAGGGCTTACGGATGAAAGTCGAGCAGAAAGTTCGAGAGGACAAGATGGTGGTCAATCTAAAGTGGCAAAATTAGAGACACCACCAACAACCGGAGATAAAGATTCTTCGCTGTATAAGACCACGGAGGAAACAGATGAGGAGATAAACAGGCTGATACGGTCAATCGATGAAAGTGTTATATATGACGAGATCAAGAAGAAAGAACACAGGAGAAGAATGGCATAG
Coding sequence (CDS)
ATGAATGGAATAATAGAAGCAATAAAGAGCCAACAACGTAGTTCTTCGGGTGGCCAATACACTCATAAATTTATGGGAGCAAGGGCGTTTGAAGAGCACCTTGAGAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTAAACATTTGAACTTGAATTCAAGCAATCCAACGGTGCTTGGAAAAAGGGATGACGATGAAGACAAAGACGAAAAAGGGCTTACGGATGAAAGTCGAGCAGAAAGTTCGAGAGGACAAGATGGTGGTCAATCTAAAGTGGCAAAATTAGAGACACCACCAACAACCGGAGATAAAGATTCTTCGCTGTATAAGACCACGGAGGAAACAGATGAGGAGATAAACAGGCTGATACGGTCAATCGATGAAAGTGTTATATATGACGAGATCAAGAAGAAAGAACACAGGAGAAGAATGGCATAG
Protein sequence
MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLGKRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEINRLIRSIDESVIYDEIKKKEHRRRMA
Homology
BLAST of MELO3C029045 vs. NCBI nr
Match:
KAA0033753.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK06532.1 protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG
Sbjct: 266 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 325
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN
Sbjct: 326 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 385
Query: 121 RLIRSIDESVIYDEIKKKEHRRRMA 146
RLIRSIDESVIYDEIKKKEHRRRMA
Sbjct: 386 RLIRSIDESVIYDEIKKKEHRRRMA 410
BLAST of MELO3C029045 vs. NCBI nr
Match:
KAA0054156.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 233.4 bits (594), Expect = 1.2e-57
Identity = 125/143 (87.41%), Postives = 132/143 (92.31%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAI+SQQ SS GGQYTH+FMGARAFEEHL+KVEEDQEEDDV+ L L+SSNPTVLG
Sbjct: 180 MNGIIEAIRSQQCSSLGGQYTHEFMGARAFEEHLDKVEEDQEEDDVEDLKLDSSNPTVLG 239
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKD KGL DESR ESS+GQDGGQSK+AK ETPPT GDKDSS YK TEETDEEIN
Sbjct: 240 KRDDDEDKDGKGLIDESRPESSKGQDGGQSKMAKSETPPTAGDKDSSPYKATEETDEEIN 299
Query: 121 RLIRSIDESVIYDEIKKKEHRRR 144
RLIRSIDESVIYDEIKKKEHRRR
Sbjct: 300 RLIRSIDESVIYDEIKKKEHRRR 322
BLAST of MELO3C029045 vs. NCBI nr
Match:
KAA0037804.1 (protein Ycf2-like [Cucumis melo var. makuwa] >TYK02879.1 protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 233.4 bits (594), Expect = 1.2e-57
Identity = 125/143 (87.41%), Postives = 132/143 (92.31%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAI+SQQ SSSGGQYTHKFMGA+AFEEHL+K +EDQEEDDV+ LNL+SSNP VLG
Sbjct: 30 MNGIIEAIRSQQCSSSGGQYTHKFMGAKAFEEHLDKADEDQEEDDVEDLNLDSSNPMVLG 89
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKDEKGL DESRAESSRGQDGG+SKVAK ETPPT DKDSSLYK TEET EEIN
Sbjct: 90 KRDDDEDKDEKGLMDESRAESSRGQDGGESKVAKSETPPTAEDKDSSLYKATEETFEEIN 149
Query: 121 RLIRSIDESVIYDEIKKKEHRRR 144
RLIRSIDESVIYDE KKKEHRRR
Sbjct: 150 RLIRSIDESVIYDETKKKEHRRR 172
BLAST of MELO3C029045 vs. NCBI nr
Match:
TYK19697.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 232.6 bits (592), Expect = 2.1e-57
Identity = 126/143 (88.11%), Postives = 132/143 (92.31%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAI+SQQ SSSGGQYTH+FMGARAFEEHL+KV+EDQEEDDV+ LNL+SSNPTVL
Sbjct: 237 MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEEDDVEDLNLDSSNPTVLE 296
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKD K L ESRAESSRGQDGGQSKVAK ETPPT GDKDSS YK TEETDEEIN
Sbjct: 297 KRDDDEDKDGKRLMGESRAESSRGQDGGQSKVAKSETPPTAGDKDSSTYKATEETDEEIN 356
Query: 121 RLIRSIDESVIYDEIKKKEHRRR 144
RLIRSIDESVIYDEIKKKEHRRR
Sbjct: 357 RLIRSIDESVIYDEIKKKEHRRR 379
BLAST of MELO3C029045 vs. NCBI nr
Match:
KAA0041558.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 232.6 bits (592), Expect = 2.1e-57
Identity = 126/143 (88.11%), Postives = 132/143 (92.31%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAI+SQQ SSSGGQYTH+FMGARAFEEHL+KV+EDQEEDDV+ LNL+SSNPTVL
Sbjct: 483 MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEEDDVEDLNLDSSNPTVLE 542
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKD K L ESRAESSRGQDGGQSKVAK ETPPT GDKDSS YK TEETDEEIN
Sbjct: 543 KRDDDEDKDGKRLMGESRAESSRGQDGGQSKVAKSETPPTAGDKDSSTYKATEETDEEIN 602
Query: 121 RLIRSIDESVIYDEIKKKEHRRR 144
RLIRSIDESVIYDEIKKKEHRRR
Sbjct: 603 RLIRSIDESVIYDEIKKKEHRRR 625
BLAST of MELO3C029045 vs. ExPASy TrEMBL
Match:
A0A5A7STD7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2249G00040 PE=4 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 5.2e-70
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG
Sbjct: 266 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 325
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN
Sbjct: 326 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 385
Query: 121 RLIRSIDESVIYDEIKKKEHRRRMA 146
RLIRSIDESVIYDEIKKKEHRRRMA
Sbjct: 386 RLIRSIDESVIYDEIKKKEHRRRMA 410
BLAST of MELO3C029045 vs. ExPASy TrEMBL
Match:
A0A5A7T2W0 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00080 PE=4 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 5.9e-58
Identity = 125/143 (87.41%), Postives = 132/143 (92.31%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAI+SQQ SSSGGQYTHKFMGA+AFEEHL+K +EDQEEDDV+ LNL+SSNP VLG
Sbjct: 30 MNGIIEAIRSQQCSSSGGQYTHKFMGAKAFEEHLDKADEDQEEDDVEDLNLDSSNPMVLG 89
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKDEKGL DESRAESSRGQDGG+SKVAK ETPPT DKDSSLYK TEET EEIN
Sbjct: 90 KRDDDEDKDEKGLMDESRAESSRGQDGGESKVAKSETPPTAEDKDSSLYKATEETFEEIN 149
Query: 121 RLIRSIDESVIYDEIKKKEHRRR 144
RLIRSIDESVIYDE KKKEHRRR
Sbjct: 150 RLIRSIDESVIYDETKKKEHRRR 172
BLAST of MELO3C029045 vs. ExPASy TrEMBL
Match:
A0A5A7UIQ5 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00800 PE=4 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 5.9e-58
Identity = 125/143 (87.41%), Postives = 132/143 (92.31%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAI+SQQ SS GGQYTH+FMGARAFEEHL+KVEEDQEEDDV+ L L+SSNPTVLG
Sbjct: 180 MNGIIEAIRSQQCSSLGGQYTHEFMGARAFEEHLDKVEEDQEEDDVEDLKLDSSNPTVLG 239
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKD KGL DESR ESS+GQDGGQSK+AK ETPPT GDKDSS YK TEETDEEIN
Sbjct: 240 KRDDDEDKDGKGLIDESRPESSKGQDGGQSKMAKSETPPTAGDKDSSPYKATEETDEEIN 299
Query: 121 RLIRSIDESVIYDEIKKKEHRRR 144
RLIRSIDESVIYDEIKKKEHRRR
Sbjct: 300 RLIRSIDESVIYDEIKKKEHRRR 322
BLAST of MELO3C029045 vs. ExPASy TrEMBL
Match:
A0A5D3D818 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00980 PE=4 SV=1)
HSP 1 Score: 232.6 bits (592), Expect = 1.0e-57
Identity = 126/143 (88.11%), Postives = 132/143 (92.31%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAI+SQQ SSSGGQYTH+FMGARAFEEHL+KV+EDQEEDDV+ LNL+SSNPTVL
Sbjct: 237 MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEEDDVEDLNLDSSNPTVLE 296
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKD K L ESRAESSRGQDGGQSKVAK ETPPT GDKDSS YK TEETDEEIN
Sbjct: 297 KRDDDEDKDGKRLMGESRAESSRGQDGGQSKVAKSETPPTAGDKDSSTYKATEETDEEIN 356
Query: 121 RLIRSIDESVIYDEIKKKEHRRR 144
RLIRSIDESVIYDEIKKKEHRRR
Sbjct: 357 RLIRSIDESVIYDEIKKKEHRRR 379
BLAST of MELO3C029045 vs. ExPASy TrEMBL
Match:
A0A5A7TF74 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00140 PE=4 SV=1)
HSP 1 Score: 232.6 bits (592), Expect = 1.0e-57
Identity = 126/143 (88.11%), Postives = 132/143 (92.31%), Query Frame = 0
Query: 1 MNGIIEAIKSQQRSSSGGQYTHKFMGARAFEEHLEKVEEDQEEDDVKHLNLNSSNPTVLG 60
MNGIIEAI+SQQ SSSGGQYTH+FMGARAFEEHL+KV+EDQEEDDV+ LNL+SSNPTVL
Sbjct: 483 MNGIIEAIRSQQCSSSGGQYTHEFMGARAFEEHLDKVKEDQEEDDVEDLNLDSSNPTVLE 542
Query: 61 KRDDDEDKDEKGLTDESRAESSRGQDGGQSKVAKLETPPTTGDKDSSLYKTTEETDEEIN 120
KRDDDEDKD K L ESRAESSRGQDGGQSKVAK ETPPT GDKDSS YK TEETDEEIN
Sbjct: 543 KRDDDEDKDGKRLMGESRAESSRGQDGGQSKVAKSETPPTAGDKDSSTYKATEETDEEIN 602
Query: 121 RLIRSIDESVIYDEIKKKEHRRR 144
RLIRSIDESVIYDEIKKKEHRRR
Sbjct: 603 RLIRSIDESVIYDEIKKKEHRRR 625
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0033753.1 | 1.1e-69 | 100.00 | protein Ycf2-like [Cucumis melo var. makuwa] >TYK06532.1 protein Ycf2-like [Cucu... | [more] |
| KAA0054156.1 | 1.2e-57 | 87.41 | protein Ycf2-like [Cucumis melo var. makuwa] | [more] |
| KAA0037804.1 | 1.2e-57 | 87.41 | protein Ycf2-like [Cucumis melo var. makuwa] >TYK02879.1 protein Ycf2-like [Cucu... | [more] |
| TYK19697.1 | 2.1e-57 | 88.11 | protein Ycf2-like [Cucumis melo var. makuwa] | [more] |
| KAA0041558.1 | 2.1e-57 | 88.11 | protein Ycf2-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7STD7 | 5.2e-70 | 100.00 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2249G0... | [more] |
| A0A5A7T2W0 | 5.9e-58 | 87.41 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00... | [more] |
| A0A5A7UIQ5 | 5.9e-58 | 87.41 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00... | [more] |
| A0A5D3D818 | 1.0e-57 | 88.11 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00... | [more] |
| A0A5A7TF74 | 1.0e-57 | 88.11 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
