MELO3C029023 (gene) Melon (DHL92) v4

Overview
NameMELO3C029023
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 14978029 .. 14980098 (+)
RNA-Seq ExpressionMELO3C029023
SyntenyMELO3C029023
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATACTGTAAATGATATCAATTCAGAAGGTGTATATTTTTAAGGAAAAGAATACACATGTGCTCTTGGCACAAATTTTGTACAATGTTGAGCTCATAATCATACTTTTCTTTGCAATACCTCCAAATTTCTTTGCAAGAATCTAACTACTCTTATCTCAAAATTGTCTTGATTCAATCAAATCATGAAAGAAAAAGCATATTGAATCAGACATGTTGTTGATCATTTTCAAAGTTGTTGGAAAGTGTCCTGAAACTCAAGTTATTTACATATTTGTTACCTTTGCGTTGTTTGCATTTTTTTTATCTAGGTTTCAAAGAAGTGTGCTATATAAACTTTCTGATCCTAAAGACTCCTCTTTTTTATTATGACTAATTCTTTCTAATAAAACTATTCTTTCTCTACCTCTTGATTTAGTATAAAAATCTGTGAGTTGATTCTTTATTGTTTACGCTTTCCTATCCATCTTTATCCATCTTTATCTGTTGATTTTGTTATAAAAGTAAAGATTTTATCCAAGTCAGGTATTTGGATCTTGCAAATAAAAACTGCGTTATTCTTTTCAAATGCAATGAGCCTAATAAAAGTTGGCTGAAACTTGATGTTTCATACCAACGATACATGGAGAAATCGCAAGGTAAGATTAAAAGCCAATAACTGTTAGACTAAACAAACAAATTGAGGGAAGCATTTAAGATGAGAAGTGACAGAAAATTTACAGCCAAGTCAGCTCAGAATGAGGGTGTACAAGAAGGAGATTATAGACCAAAATTTATCTACAACCTATATCCTTGGGCCTATGGGCTATTAGAAATTGAGCATACTGGCATATGGGGTCAAAGTTTGAAGCCATGGGCTGTTAAATTGGGTCCAAAATAAGTCTTGGGACCAGTCCATGTCCAATTTTGGAACTTGAAGCTCAGTAAGTTTCTCAAGCTCTGATGGGATTTGCAACGATGTGCAGGAAATTTTTGGCTCCACTGCTTTATCTTCCTGTATTTCATCCACCATGGTTGCCACTTCTACTTCTTTGTCAAGAACTTCATGGGTTGGTGTTACAGAAGAAACCATAGCTTCTTGTTGGCTGCAAAATGAAATGGTCTCAAATGGAGATGCAGGTGGTGAATAGGAAGCTTGAAAAGGCTTTGCATCTTCCTCTTCTTTGGCTGCTCTTTGCTCTAGGACTTTCAAGGAAGTTGCTTTCCTATAGATCTTGCATAGTACCATGTCCTGCATTTCAAAAAAATGTAAAACATGAATGAATGAAGGATTACAAAAACCTGTAGTCATAGCACTTCCAAGTTTTGTTTTATGTTTCATGTTTCTCTTTTAGTGTGTTTATTTTAAATCACTGATTGACTCAAAAGCTTCGGCTGATAGCTGAAGATAGATTTAATGTTATATCATCTAACAATCTCTTGCTTTTTGGAGTTTAATAGCCATATTTTTTTCTCTTACAACAAAAAATCGTTGTCAAATACATTTTTGTTAATGGATACTAAGTTACCTTTGGCAATGGAGAGTTGTCGGGAAAACGATACTCATTCATGATCCAATCGGTCTTGGTTCCTCTAGTTGCTCTTCCCAAGTAGAACACAAGTGTCTTTCTCAATCCAATGAGTCGTTTCGGATCCGATAAACTAACAATTTTTCGATCCGACCCGGTTGCTTTCCAGTAACCATTTTTGGTTGTTCTGTTAGGCCTCCCACTCCCACCTAGCTTCCTGTCTCTTGGCACAAAAAAGTACCATTCTCTCTCTCCAATCCTTGCCAATCCTACACACAACAGAAAAAAAAAACTCACATTTCAACCCACTGAATCAATCAACAACAGTAAACAGTTCAAAAGAGACTGCAACAATACAAACCAGGCAAATCCCAAGGATCATGTTGGTAGAGATTAAGAATTCCAATAGGATCAAACTGCAATCTCTTCCCAGAGACAACATGTTTGAGATAAAAATTAAGAAGTTCTTCTTCTGTAGGGTGGAATCTAAATCCAGGAAGATCAGTTTCATGTGCCATTTCACTTCTTATAGAGCTAAGAAACAACAGTTTGGTGAAGTGA

mRNA sequence

ATGAATACTGTAAATGATATCAATTCAGAAGATTTTATCCAAGTCAGGTATTTGGATCTTGCAAATAAAAACTGCGTTATTCTTTTCAAATGCAATGAGCCTAATAAAAGTTGGCTGAAACTTGATGTTTCATACCAACGATACATGGAGAAATCGCAAGTAAGTTTCTCAAGCTCTGATGGGATTTGCAACGATGTGCAGGAAATTTTTGGCTCCACTGCTTTATCTTCCTGTATTTCATCCACCATGGTTGCCACTTCTACTTCTTTGTCAAGAACTTCATGGGTTGGTGTTACAGAAGAAACCATAGCTTCTTGTTGGCTGCAAAATGAAATGGTCTCAAATGGAGATGCAGGTGGCCTCCCACTCCCACCTAGCTTCCTGTCTCTTGGCACAAAAAAGTACCATTCTCTCTCTCCAATCCTTGCCAATCCTACACACAACAGAAAAAAAAAACTCACATTTCAACCCACTGAATCAATCAACAACAGTAAACAGTTCAAAAGAGACTGCAACAATACAAACCAGGCAAATCCCAAGGATCATGTTGGGTGGAATCTAAATCCAGGAAGATCAGTTTCATGTGCCATTTCACTTCTTATAGAGCTAAGAAACAACAGTTTGGTGAAGTGA

Coding sequence (CDS)

ATGAATACTGTAAATGATATCAATTCAGAAGATTTTATCCAAGTCAGGTATTTGGATCTTGCAAATAAAAACTGCGTTATTCTTTTCAAATGCAATGAGCCTAATAAAAGTTGGCTGAAACTTGATGTTTCATACCAACGATACATGGAGAAATCGCAAGTAAGTTTCTCAAGCTCTGATGGGATTTGCAACGATGTGCAGGAAATTTTTGGCTCCACTGCTTTATCTTCCTGTATTTCATCCACCATGGTTGCCACTTCTACTTCTTTGTCAAGAACTTCATGGGTTGGTGTTACAGAAGAAACCATAGCTTCTTGTTGGCTGCAAAATGAAATGGTCTCAAATGGAGATGCAGGTGGCCTCCCACTCCCACCTAGCTTCCTGTCTCTTGGCACAAAAAAGTACCATTCTCTCTCTCCAATCCTTGCCAATCCTACACACAACAGAAAAAAAAAACTCACATTTCAACCCACTGAATCAATCAACAACAGTAAACAGTTCAAAAGAGACTGCAACAATACAAACCAGGCAAATCCCAAGGATCATGTTGGGTGGAATCTAAATCCAGGAAGATCAGTTTCATGTGCCATTTCACTTCTTATAGAGCTAAGAAACAACAGTTTGGTGAAGTGA

Protein sequence

MNTVNDINSEDFIQVRYLDLANKNCVILFKCNEPNKSWLKLDVSYQRYMEKSQVSFSSSDGICNDVQEIFGSTALSSCISSTMVATSTSLSRTSWVGVTEETIASCWLQNEMVSNGDAGGLPLPPSFLSLGTKKYHSLSPILANPTHNRKKKLTFQPTESINNSKQFKRDCNNTNQANPKDHVGWNLNPGRSVSCAISLLIELRNNSLVK
Homology
BLAST of MELO3C029023 vs. NCBI nr
Match: KAG7011802.1 (hypothetical protein SDJN02_26708, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-09
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0

Query: 70  FGSTALSSCISSTMVATSTSLSRTSWVGVTEETIASCWLQNEMVSNGDAGG 121
           F STA SS + STM ATS+S  RTSWVG+TE TI+SCWLQ EM SNGDAGG
Sbjct: 78  FASTAFSSFVLSTMAATSSSFLRTSWVGITEGTISSCWLQKEMDSNGDAGG 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7011802.14.0e-0972.55hypothetical protein SDJN02_26708, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C029023.1MELO3C029023.1mRNA