MELO3C028907 (gene) Melon (DHL92) v4

Overview
NameMELO3C028907
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionPentatricopeptide repeat-containing protein
Locationchr01: 29437108 .. 29437383 (-)
RNA-Seq ExpressionMELO3C028907
SyntenyMELO3C028907
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCTTGCTGGACTTTCGCATGATACCTTCACACTGAATATATTGGTAAATTGCCTTTGTAATGTCAATCGGGTTAGCGAAGCTCTTGCGGCCATAACGAGGATTTTAAGGAGAGTTTATATTCCTGATCTAGTCACATATACGACATTGATTAAGGGATTGTGTATGGAGCATAGGATTAGTGAAGCCACACGGTTATTTCTCAGAAGGCAAAAATTAGGTTGTACGCCTGATGTGGTTGCTTATGGGACTTTGATCAAGGGGCTATGCTGA

mRNA sequence

ATGCGCCTTGCTGGACTTTCGCATGATACCTTCACACTGAATATATTGGTAAATTGCCTTTGTAATGTCAATCGGGTTAGCGAAGCTCTTGCGGCCATAACGAGGATTTTAAGGAGAGTTTATATTCCTGATCTAGTCACATATACGACATTGATTAAGGGATTGTGTATGGAGCATAGGATTAGTGAAGCCACACGGTTATTTCTCAGAAGGCAAAAATTAGGTTGTACGCCTGATGTGGTTGCTTATGGGACTTTGATCAAGGGGCTATGCTGA

Coding sequence (CDS)

ATGCGCCTTGCTGGACTTTCGCATGATACCTTCACACTGAATATATTGGTAAATTGCCTTTGTAATGTCAATCGGGTTAGCGAAGCTCTTGCGGCCATAACGAGGATTTTAAGGAGAGTTTATATTCCTGATCTAGTCACATATACGACATTGATTAAGGGATTGTGTATGGAGCATAGGATTAGTGAAGCCACACGGTTATTTCTCAGAAGGCAAAAATTAGGTTGTACGCCTGATGTGGTTGCTTATGGGACTTTGATCAAGGGGCTATGCTGA

Protein sequence

MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHRISEATRLFLRRQKLGCTPDVVAYGTLIKGLC
Homology
[Close]
BLAST of MELO3C028907 vs. NCBI nr
Match: KAA0064045.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26203.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 6.8e-38
Identity = 85/91 (93.41%), Postives = 85/91 (93.41%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M LAGLS DTFTLNILVNCLCNVNRVSEALAAIT ILRRVYI DLVTYTTLIKGLCMEHR
Sbjct: 94  MHLAGLSPDTFTLNILVNCLCNVNRVSEALAAITGILRRVYILDLVTYTTLIKGLCMEHR 153

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLFLR QKLGCTPDVV YGTLIKGLC
Sbjct: 154 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 184

[Close]
BLAST of MELO3C028907 vs. NCBI nr
Match: XP_011659273.2 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sativus] >KAE8646303.1 hypothetical protein Csa_016074 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 3.5e-34
Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           MRLAGLS D FTL+IL NCLCNVNRVSEALAA+  ILRR YIP++VTYTTLIKGLCMEHR
Sbjct: 117 MRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHR 176

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLFLR QKLGCTP+ V YGTLIKGLC
Sbjct: 177 ISEATRLFLRMQKLGCTPNAVTYGTLIKGLC 207

[Close]
BLAST of MELO3C028907 vs. NCBI nr
Match: XP_008451225.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis melo] >XP_016901074.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           MRLAGLS    TLNILVNCLCNVNRVSEALA +  +LRR YIP++VTYTTLIKGLCMEHR
Sbjct: 66  MRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHR 125

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLFLR QKLGCTP+VV YGTL+KGLC
Sbjct: 126 ISEATRLFLRMQKLGCTPNVVTYGTLVKGLC 156

[Close]
BLAST of MELO3C028907 vs. NCBI nr
Match: XP_011659291.1 (pentatricopeptide repeat-containing protein At1g62914, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           MRLAGLS D FTL+IL NCLCNVNRVSEALAA+  ILRR YIP++VTY TLIKGLCMEHR
Sbjct: 117 MRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYNTLIKGLCMEHR 176

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATR FLR QKLGCTP+VV YGTLIKGLC
Sbjct: 177 ISEATRFFLRMQKLGCTPNVVTYGTLIKGLC 207

[Close]
BLAST of MELO3C028907 vs. NCBI nr
Match: KAA0059713.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26151.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 77/91 (84.62%), Postives = 80/91 (87.91%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M LAGLS    TLNILVNCLCNVNRVSEALAA+  ILRR YIPD+VTY TLIKGLCMEHR
Sbjct: 66  MCLAGLSPSVVTLNILVNCLCNVNRVSEALAALAGILRRGYIPDIVTYNTLIKGLCMEHR 125

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLFLR QKLGCTP+VV YGTLIKGLC
Sbjct: 126 ISEATRLFLRMQKLGCTPNVVTYGTLIKGLC 156

[Close]
BLAST of MELO3C028907 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-16
Identity = 37/91 (40.66%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M L G++H+ +TL+I++NC C   ++  A +A+ +I++  Y P+ +T++TLI GLC+E R
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           +SEA  L  R  ++G  PD++   TL+ GLC
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLC 204

[Close]
BLAST of MELO3C028907 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-16
Identity = 38/91 (41.76%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M L G++H+ +TL+I++NC C   ++S A +A+ +I++  Y PD VT++TLI GLC+E R
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           +SEA  L  R  ++G  P ++    L+ GLC
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLC 188

[Close]
BLAST of MELO3C028907 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-15
Identity = 36/91 (39.56%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           + L G++H+ +TLNI++NC C   +   A + + ++++  Y PD  T+ TLIKGL +E +
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           +SEA  L  R  + GC PDVV Y +++ G+C
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204

[Close]
BLAST of MELO3C028907 vs. ExPASy Swiss-Prot
Match: Q9LQ15 (Pentatricopeptide repeat-containing protein At1g62914, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62914 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.9e-15
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M   G   D  TLN L+N  C+ NR+S+A+A + +++   Y PD VT+TTLI GL + ++
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
            SEA  L  R  + GC PD+V YG ++ GLC
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229

[Close]
BLAST of MELO3C028907 vs. ExPASy Swiss-Prot
Match: P0C7R3 (Pentatricopeptide repeat-containing protein At1g64583, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g64583 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.4e-15
Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M L G+SHD ++  IL++C C  +R+S AL+ + ++++  Y P +VT+ +L+ G C+ +R
Sbjct: 97  MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           I +A  L +   K G  P+VV Y TLI GLC
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187

[Close]
BLAST of MELO3C028907 vs. ExPASy TrEMBL
Match: A0A5D3DRB9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001320 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.3e-38
Identity = 85/91 (93.41%), Postives = 85/91 (93.41%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M LAGLS DTFTLNILVNCLCNVNRVSEALAAIT ILRRVYI DLVTYTTLIKGLCMEHR
Sbjct: 94  MHLAGLSPDTFTLNILVNCLCNVNRVSEALAAITGILRRVYILDLVTYTTLIKGLCMEHR 153

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLFLR QKLGCTPDVV YGTLIKGLC
Sbjct: 154 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLC 184

[Close]
BLAST of MELO3C028907 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.4e-34
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           MRLAGLS    TLNILVNCLCNVNRVSEALA +  +LRR YIP++VTYTTLIKGLCMEHR
Sbjct: 66  MRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHR 125

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLFLR QKLGCTP+VV YGTL+KGLC
Sbjct: 126 ISEATRLFLRMQKLGCTPNVVTYGTLVKGLC 156

[Close]
BLAST of MELO3C028907 vs. ExPASy TrEMBL
Match: A0A5A7UUW8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00730 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.4e-34
Identity = 77/91 (84.62%), Postives = 80/91 (87.91%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M LAGLS    TLNILVNCLCNVNRVSEALAA+  ILRR YIPD+VTY TLIKGLCMEHR
Sbjct: 66  MCLAGLSPSVVTLNILVNCLCNVNRVSEALAALAGILRRGYIPDIVTYNTLIKGLCMEHR 125

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLFLR QKLGCTP+VV YGTLIKGLC
Sbjct: 126 ISEATRLFLRMQKLGCTPNVVTYGTLIKGLC 156

[Close]
BLAST of MELO3C028907 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.4e-34
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           MRLAGLS    TLNILVNCLCNVNRVSEALA +  +LRR YIP++VTYTTLIKGLCMEHR
Sbjct: 66  MRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVTYTTLIKGLCMEHR 125

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLFLR QKLGCTP+VV YGTL+KGLC
Sbjct: 126 ISEATRLFLRMQKLGCTPNVVTYGTLVKGLC 156

[Close]
BLAST of MELO3C028907 vs. ExPASy TrEMBL
Match: A0A1S4E1M9 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Cucumis melo OX=3656 GN=LOC107991456 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.4e-33
Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M LAGLS D FTLNILVNCLC VNRVSEALAA+  ILRR YIP++V YTTLIKGLCMEHR
Sbjct: 36  MHLAGLSPDIFTLNILVNCLCKVNRVSEALAAMVGILRRGYIPNIVIYTTLIKGLCMEHR 95

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           ISEATRLF++ QKLGCT DVV YGTLIKGLC
Sbjct: 96  ISEATRLFIKMQKLGCTLDVVTYGTLIKGLC 126

[Close]
BLAST of MELO3C028907 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-17
Identity = 37/91 (40.66%), Postives = 62/91 (68.13%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M L G++H+ +TL+I++NC C   ++  A +A+ +I++  Y P+ +T++TLI GLC+E R
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           +SEA  L  R  ++G  PD++   TL+ GLC
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLC 204

[Close]
BLAST of MELO3C028907 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 2.4e-17
Identity = 38/91 (41.76%), Postives = 61/91 (67.03%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M L G++H+ +TL+I++NC C   ++S A +A+ +I++  Y PD VT++TLI GLC+E R
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           +SEA  L  R  ++G  P ++    L+ GLC
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLC 188

[Close]
BLAST of MELO3C028907 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 83.6 bits (205), Expect = 9.2e-17
Identity = 36/91 (39.56%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           + L G++H+ +TLNI++NC C   +   A + + ++++  Y PD  T+ TLIKGL +E +
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGK 173

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           +SEA  L  R  + GC PDVV Y +++ G+C
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204

[Close]
BLAST of MELO3C028907 vs. TAIR 10
Match: AT1G62914.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 81.6 bits (200), Expect = 3.5e-16
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M   G   D  TLN L+N  C+ NR+S+A+A + +++   Y PD VT+TTLI GL + ++
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
            SEA  L  R  + GC PD+V YG ++ GLC
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229

[Close]
BLAST of MELO3C028907 vs. TAIR 10
Match: AT1G62720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 5.9e-16
Identity = 35/91 (38.46%), Postives = 59/91 (64.84%), Query Frame = 0 

Query: 1   MRLAGLSHDTFTLNILVNCLCNVNRVSEALAAITRILRRVYIPDLVTYTTLIKGLCMEHR 60
           M + G+ HD ++ NI++NCLC  +R   AL+ + ++++  Y PD+VT ++LI G C  +R
Sbjct: 95  MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154

Query: 61  ISEATRLFLRRQKLGCTPDVVAYGTLIKGLC 92
           + +A  L  + +++G  PDVV Y T+I G C
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185

The following BLAST results are available for this feature:
BLAST of MELO3C028907 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0064045.16.8e-3893.41pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26203... [more]
XP_011659273.23.5e-3484.62pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sa... [more]
XP_008451225.11.3e-3382.42PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-... [more]
XP_011659291.11.3e-3383.52pentatricopeptide repeat-containing protein At1g62914, mitochondrial isoform X1 ... [more]
KAA0059713.11.3e-3384.62pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26151... [more]
BLAST of MELO3C028907 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0WKV32.0e-1640.66Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Q9ASZ83.4e-1641.76Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... [more]
P0C7Q71.3e-1539.56Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Q9LQ154.9e-1543.96Pentatricopeptide repeat-containing protein At1g62914, mitochondrial OS=Arabidop... [more]
P0C7R38.4e-1540.66Pentatricopeptide repeat-containing protein At1g64583, mitochondrial OS=Arabidop... [more]
BLAST of MELO3C028907 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DRB93.3e-3893.41Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4DYL66.4e-3482.42pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc... [more]
A0A5A7UUW86.4e-3484.62Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3C8J06.4e-3482.42Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4E1M95.4e-3382.42LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g12... [more]
BLAST of MELO3C028907 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G12300.11.4e-1740.66Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12620.12.4e-1741.76Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12700.19.2e-1739.56ATP binding;nucleic acid binding;helicases [more]
AT1G62914.13.5e-1643.96pentatricopeptide (PPR) repeat-containing protein [more]
AT1G62720.15.9e-1638.46Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 5..30
e-value: 1.1E-5
score: 25.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 11..44
e-value: 1.9E-4
score: 19.4
coord: 46..80
e-value: 6.8E-8
score: 30.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 43..91
e-value: 4.3E-15
score: 55.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..78
score: 11.268274
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 8.988323
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..91
e-value: 1.1E-22
score: 82.3
NoneNo IPR availablePANTHERPTHR47938:SF12PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 5, MITOCHONDRIALcoord: 4..91
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 4..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028907.1MELO3C028907.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding