MELO3C028897 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGGGTTGATGGAAGAGTTAGTCTAAGATAACGTGAAGATCTCAAAAGTCGCCAAGTAAATGATCAAAGTCCTTGGAGACTCGCATGATAAAGAGATGTATGATCTTCTTGTTGAGGTAACTGACCTACGAAAGTTCGTGGAAGAGGAACTTCACGTCTTGTGGAAGGACGTCGACGAGGTACGTGTCGAATGTCAATCTAGACATGCTAGTAATGGTAATGCATCCATTAGCACATCATACATCGTTGTAGGCACCCACGGTATTAAAGTGCCAAAACCTAACATGTATAACAACACAAGGAATGCCACAATGGTGGAGAATTTCCTATTTGGCCTTGAGCAATATTATGAGGCCTTAGGAATCGTCGACGATGGTGCCAAAATCGCGAATGCCTCTAATTTCCTACACGAGTCGACACAACTATGGTAGCATAGGAAGCATGCGGAACGGAAGAAGGACCGCACAATCTTACGAACGTGGGAACAATTCAAGGTAGAACTCCGAAAGCACTTTGTTCTCCACAATGCTGACATGGAGGCACAAGGTAAGTTGAGGAGATTAAGGTAAACTGGTGGCATTCTCGAGTATATAAAGGAGTTCACTACTCTAATGTTGGAAATAGAAGATCTATCAGGCAAGGATGCTTCCTTTCATTTTAGAGACGGTCTTAAAGATTGGGAAAAAATTGAGCTCGATAGGTGCAACGTGCAAACGCTTGATGATGCTATTTCTACAGCCCAAGTACTCATTGACATTTCCTCCAAGGAGAAGAAGATCCACATAGATTAAGGAGATGGGTCTGAGCCGAAGAAAGAGGAGAACTTTAAACAAGATGAGAAGCATGGAAAGGCCTCGTTTACCAACAAAGGTATGACTCCTTTACCTTGAGTCTTATGTAATGATCCACATTAGACAAGAGACTGCCTAAAGAAGAACAAGTTGAGTGTAATGGTGGCCAATACACACGATGAAGAGGAGGCATCAGTGAAAAGGTCGGCATAGATAGATGCAATTCGATACTTAAGTGCAATGGACAGTGATTCCTCTAAAGAACCTCAAGAGAGAGGTTGATTGTATGTGGATGCCACACTCAATAACAAGGTTGCCTTAGCAATATTAGACACAGGCGCAACAAAAAATGTGATGGATCCTAAAGAGGC ATGAGCGGGTTGATGGAAGAGTTAGTCTAAGATAACGTGAAGATCTCAAAAGTCGCCAAGTAAATGATCAAAGTCCTTGGAGACTCGCATGATAAAGAGATGTATGATCTTCTTGTTGAGGTAACTGACCTACGAAAGTTCGTGGAAGAGGAACTTCACGTCTTGTGGAAGGACGTCGACGAGGTACGTGTCGAATGTCAATCTAGACATGCTAGTAATGGTAATGCATCCATTAGCACATCATACATCGTTGTAGGCACCCACGGTATTAAAGTGCCAAAACCTAACATGTATAACAACACAAGGAATGCCACAATGGTGGAGAATTTCCTATTTGGCCTTGAGCAATATTATGAGGCCTTAGGAATCGTCGACGATGGTGCCAAAATCGCGAATGCCTCTAATTTCCTACACGAGTCGACACAACTATGGTAGCATAGGAAGCATGCGGAACGGAAGAAGGACCGCACAATCTTACGAACGTGGGAACAATTCAAGGTAGAACTCCGAAAGCACTTTGTTCTCCACAATGCTGACATGGAGGCACAAGGTAAGTTGAGGAGATTAAGGTAAACTGGTGGCATTCTCGAGTATATAAAGGAGTTCACTACTCTAATGTTGGAAATAGAAGATCTATCAGGCAAGGATGCTTCCTTTCATTTTAGAGACGGTCTTAAAGATTGGGAAAAAATTGAGCTCGATAGGTGCAACGTGCAAACGCTTGATGATGCTATTTCTACAGCCCAAGTACTCATTGACATTTCCTCCAAGGAGAAGAAGATCCACATAGATTAAGGAGATGGGTCTGAGCCGAAGAAAGAGGAGAACTTTAAACAAGATGAGAAGCATGGAAAGGCCTCGTTTACCAACAAAGGTATGACTCCTTTACCTTGAGTCTTATGTAATGATCCACATTAGACAAGAGACTGCCTAAAGAAGAACAAGTTGAGTGTAATGGTGGCCAATACACACGATGAAGAGGAGGCATCAGTGAAAAGGTCGGCATAGATAGATGCAATTCGATACTTAAGTGCAATGGACAGTGATTCCTCTAAAGAACCTCAAGAGAGAGGTTGATTGTATGTGGATGCCACACTCAATAACAAGGTTGCCTTAGCAATATTAGACACAGGCGCAACAAAAAATGTGATGGATCCTAAAGAGGC ATGATCAAAGTCCTTGGAGACTCGCATGATAAAGAGATGTATGATCTTCTTGTTGAGGTAACTGACCTACGAAAGTTCGTGGAAGAGGAACTTCACGTCTTGTGGAAGGACGTCGACGAGGTACGTGTCGAATGTCAATCTAGACATGCTAGTAATGGTAATGCATCCATTAGCACATCATACATCGTTGTAGGCACCCACGGTATTAAAGTGCCAAAACCTAACATGTATAACAACACAAGGAATGCCACAATGGTGGAGAATTTCCTATTTGGCCTTGAGCAATATTATGAGGCCTTAGGAATCGTCGACGATGGTGCCAAAATCGCGAATGCCTCTAATTTCCTACACGAGTCGACACAACTATGGTAG MIKVLGDSHDKEMYDLLVEVTDLRKFVEEELHVLWKDVDEVRVECQSRHASNGNASISTSYIVVGTHGIKVPKPNMYNNTRNATMVENFLFGLEQYYEALGIVDDGAKIANASNFLHESTQLW Homology
BLAST of MELO3C028897 vs. NCBI nr
Match: KAA0059692.1 (uncharacterized protein E6C27_scaffold54G001490 [Cucumis melo var. makuwa] >TYK26129.1 uncharacterized protein E5676_scaffold111G00490 [Cucumis melo var. makuwa]) HSP 1 Score: 229.6 bits (584), Expect = 1.5e-56 Identity = 113/120 (94.17%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of MELO3C028897 vs. NCBI nr
Match: KAA0035960.1 (uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK30443.1 uncharacterized protein E5676_scaffold349G00560 [Cucumis melo var. makuwa]) HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52 Identity = 106/123 (86.18%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of MELO3C028897 vs. NCBI nr
Match: KAA0035961.1 (uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK30442.1 uncharacterized protein E5676_scaffold349G00550 [Cucumis melo var. makuwa]) HSP 1 Score: 204.5 bits (519), Expect = 5.2e-49 Identity = 101/123 (82.11%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of MELO3C028897 vs. NCBI nr
Match: KAA0050866.1 (uncharacterized protein E6C27_scaffold404G001380 [Cucumis melo var. makuwa]) HSP 1 Score: 118.6 bits (296), Expect = 3.7e-23 Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = 0
BLAST of MELO3C028897 vs. NCBI nr
Match: TYK30387.1 (uncharacterized protein E5676_scaffold575G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 115.5 bits (288), Expect = 3.2e-22 Identity = 61/130 (46.92%), Postives = 83/130 (63.85%), Query Frame = 0
BLAST of MELO3C028897 vs. ExPASy TrEMBL
Match: A0A5D3DRU7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00490 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 7.3e-57 Identity = 113/120 (94.17%), Postives = 115/120 (95.83%), Query Frame = 0
BLAST of MELO3C028897 vs. ExPASy TrEMBL
Match: A0A5A7SY30 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00560 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52 Identity = 106/123 (86.18%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of MELO3C028897 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.5e-49 Identity = 101/123 (82.11%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of MELO3C028897 vs. ExPASy TrEMBL
Match: A0A5A7U9J4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G001380 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23 Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = 0
BLAST of MELO3C028897 vs. ExPASy TrEMBL
Match: A0A5D3BWR0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00040 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.5e-22 Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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