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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. GGTGACTTTATGTTGGTTCTTTTGTTTGGCAATGGAAAGACTATTATGGTGGTGACTATTTCTCAAAACTTGAGTTGTCTGCAGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTACTTATAAAAAGAATGGTCCGTAAGAATTAA mRNA sequence GGTGACTTTATGTTGGTTCTTTTGTTTGGCAATGGAAAGACTATTATGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTACTTATAAAAAGAATGGTCCGTAAGAATTAA Coding sequence (CDS) ATGTTGGTTCTTTTGTTTGGCAATGGAAAGACTATTATGGTGGCTTGTCTACTCCATTTCAAGTACAAGCCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGTGTTCAAGTACTTATAAAAAGAATGGTCCGTAA Protein sequence MLVLLFGNGKTIMVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP
Homology
BLAST of MELO3C028847 vs. NCBI nr
Match: TYK26663.1 (peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 9.3e-10 Identity = 35/42 (83.33%), Postives = 36/42 (85.71%), Query Frame = 0
Query: 8 NGKTIMVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP 50
+ K VACLLHFKYK KRLNTYKKNDQYKSK SSTYKKNGP
Sbjct: 282 SSKCFSVACLLHFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 323
BLAST of MELO3C028847 vs. NCBI nr
Match: TYK07944.1 (aspartic proteinase A1-like [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 4.6e-09 Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0
Query: 8 NGKTIMVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP 50
+ K VACLL+FKYK KRLNTYKKNDQYKSK SSTYKKNGP
Sbjct: 49 SSKCFSVACLLYFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 90
BLAST of MELO3C028847 vs. ExPASy TrEMBL
Match: A0A5D3DSU7 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003180 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.5e-10 Identity = 35/42 (83.33%), Postives = 36/42 (85.71%), Query Frame = 0
Query: 8 NGKTIMVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP 50
+ K VACLLHFKYK KRLNTYKKNDQYKSK SSTYKKNGP
Sbjct: 282 SSKCFSVACLLHFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 323
BLAST of MELO3C028847 vs. ExPASy TrEMBL
Match: A0A5D3C9N6 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00610 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.2e-09 Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0
Query: 8 NGKTIMVACLLHFKYKPKRLNTYKKNDQYKSKCSSTYKKNGP 50
+ K VACLL+FKYK KRLNTYKKNDQYKSK SSTYKKNGP
Sbjct: 49 SSKCFSVACLLYFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 90
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK26663.1 | 9.3e-10 | 83.33 | peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa] | [more] |
| TYK07944.1 | 4.6e-09 | 80.95 | aspartic proteinase A1-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DSU7 | 4.5e-10 | 83.33 | Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003180 ... | [more] |
| A0A5D3C9N6 | 2.2e-09 | 80.95 | Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00610 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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