MELO3C028828 (gene) Melon (DHL92) v4

Overview
NameMELO3C028828
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr01: 23567572 .. 23568036 (-)
RNA-Seq ExpressionMELO3C028828
SyntenyMELO3C028828
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAATGAGGGACGTACGACAACGAAAGTGAGCGATTCAAATCGGTTCTTCTGGGCAGCGTCGGGTGGCGTACGGAGGAGAAGGAAGTTGGCAAAGGCAGGGATTGGACCGAAGAAGAACGCGCGATTGAAGATAGAGACGGTCGGAAGTCGACTGGTCGCATGAGACAGAGAGGAGGATCGGAAATGCGGCCGCTGCGAACGGCTGTACGTTGGCATTGCGAGGAAGACGACGATAGAGACGGAGGCGTGCGGAGGCAGTCGGTTGGACGAAGGAGAAGGTTGGGACGGAGGGCGGCTGTGTGTCGAAATGAAGAGAAATGGAGGTCGGTGGAGCGTGGCATGGTCGGCTATCGAGTGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGAAGAAGAAGGAGAAATCGGGGGGGGGGGGCGCAGGGACTTAGGATTTCTTTTTT

mRNA sequence

ATGGCCGAATGAGGGACGTACGACAACGAAAGTGAGCGATTCAAATCGGTTCTTCTGGGCAGCGTCGGGTGGCGTACGGAGGAGAAGGAAGTTGGCAAAGGCAGGGATTGGACCGAAGAAGAACGCGCGATTGAAGATAGAGACGGTCGGAAGTCGACTGGTCGCATGAGACAGAGAGGAGGATCGGAAATGCGGCCGCTGCGAACGGCTGTACGTTGGCATTGCGAGGAAGACGACGTTGGACGAAGGAGAAGGTTGGGACGGAGGGCGGCTGTGTGTCGAAATGAAGAGAAATGGAGGTCGGTGGAGCGTGGCATGGTCGGCTATCGAGTGAAGAAAAAGAAGAAGAAGAGAAATCGGGGGGGGGGGGCGCAGGGACTTAGGATTTCTTTTTT

Coding sequence (CDS)

ATGAGACAGAGAGGAGGATCGGAAATGCGGCCGCTGCGAACGGCTGTACGTTGGCATTGCGAGGAAGACGACGTTGGACGAAGGAGAAGGTTGGGACGGAGGGCGGCTGTGTGTCGAAATGAAGAGAAATGGAGGTCGGTGGAGCGTGGCATGGTCGGCTATCGAGTGAAGAAAAAGAAGAAGAAGAGAAATCGGGGGGGGGGGGCGCAGGGACTTAGGATTTCTTTT

Protein sequence

MRQRGGSEMRPLRTAVRWHCEEDDVGRRRRLGRRAAVCRNEEKWRSVERGMVGYRVKKKKKKRNRGGGAQGLRISF
Homology
[Close]
BLAST of MELO3C028828 vs. NCBI nr
Match: KAA0025928.1 (uncharacterized protein E6C27_scaffold34G002290 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 4.8e-05
Identity = 32/55 (58.18%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 1   MRQRGGSEMRPLRTAVRWHCEEDDVG---RRRRLGRRAAVCRNEEKWRSVERGMV 53
           +RQRG SEM  LRT VRW CE DD G           AAVCRNEEKW S ERG++
Sbjct: 57  VRQRGVSEMGRLRTVVRWRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGVI 111

[Close]
BLAST of MELO3C028828 vs. ExPASy TrEMBL
Match: A0A5A7SIC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002290 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-05
Identity = 32/55 (58.18%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 1   MRQRGGSEMRPLRTAVRWHCEEDDVG---RRRRLGRRAAVCRNEEKWRSVERGMV 53
           +RQRG SEM  LRT VRW CE DD G           AAVCRNEEKW S ERG++
Sbjct: 57  VRQRGVSEMGRLRTVVRWRCEADDNGDGETTTETETDAAVCRNEEKWSSEERGVI 111

The following BLAST results are available for this feature:
BLAST of MELO3C028828 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0025928.14.8e-0558.18uncharacterized protein E6C27_scaffold34G002290 [Cucumis melo var. makuwa][more]
BLAST of MELO3C028828 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028828 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SIC62.3e-0558.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C028828 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028828.1MELO3C028828.1mRNA