MELO3C028796 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028796
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	non-specific lipid-transfer protein-like protein At2g13820
Location	chr01: 20918596 .. 20919059 (+)
RNA-Seq Expression	MELO3C028796
Synteny	MELO3C028796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTACTAAATTGGGTACCCTTCATGTTGTTTCAGCCGCTACTGCTCCTGCTTCAGCTCCAGGTACCATTTTCTAAACAATCTTCATCTTCTTCCTCTTCTTATCATTCAAATTTTCACATTTTCCCCCTTAATCTTCTGAAATTTACAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGGTAATCACCAATCTCAATTGATCTTTTTACGCTGTTTCTTGTTCTTCTCTCTAAGACTTTTCTTTTTGCAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

mRNA sequence

ATGAAATTACTAAATTGGGTACCCTTCATGTTGTTTCAGCCGCTACTGCTCCTGCTTCAGCTCCAGGTACCATTTTCTAAACAATCTTCATCTTCTTCCTCTTCTTATCATTCAAATTTTCACATTTTCCCCCTTAATCTTCTGAAATTTACAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

Coding sequence (CDS)

ATGAAATTACTAAATTGGGTACCCTTCATGTTGTTTCAGCCGCTACTGCTCCTGCTTCAGCTCCAGGTACCATTTTCTAAACAATCTTCATCTTCTTCCTCTTCTTATCATTCAAATTTTCACATTTTCCCCCTTAATCTTCTGAAATTTACAGCCTCGATCCCTCTCGGACCATCTCTTTCTCCACAACCTTCACCAACGGCCAGTCCTCAAGCCCCGGAACCCACCACGCCGGCTCTTACTCCATCTTCTCCGGTAGTTCCTGAAGCCGAAGCTCCATCGGAGACTGGCGGAAGTCGCCCAGTTCTGACCCCATCCTCCGCCGTCCCTTCAAACAGCTTTCCAGATAGTTTTCTGCTTATGGGATTAGCATTTGTAATTTTGAAAATTTGA

Protein sequence

MKLLNWVPFMLFQPLLLLLQLQVPFSKQSSSSSSSYHSNFHIFPLNLLKFTASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSNSFPDSFLLMGLAFVILKI

Homology

[Close]

BLAST of MELO3C028796 vs. NCBI nr
Match: XP_008447160.1 (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis melo] >KAA0040812.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa] >TYK17789.1 non-specific lipid-transfer protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-30
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 52  ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS 111
           ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS
Sbjct: 120 ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS 179

Query: 112 NSFPDSFLLMGLAFVILKI 131
           NSFPDSFLLMGLAFVILKI
Sbjct: 180 NSFPDSFLLMGLAFVILKI 198

[Close]

BLAST of MELO3C028796 vs. NCBI nr
Match: XP_011659016.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KGN44233.1 hypothetical protein Csa_015516 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 52  ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS 111
           ASIPLGP+L PQPSP+ASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSS VPS
Sbjct: 122 ASIPLGPTLPPQPSPSASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSDVPS 181

Query: 112 NSFPDSFLLMGLAFVILKI 131
           NSFP++FLLMGLAFVILK+
Sbjct: 182 NSFPNTFLLMGLAFVILKV 200

[Close]

BLAST of MELO3C028796 vs. NCBI nr
Match: XP_038874253.1 (non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida])

HSP 1 Score: 114.4 bits (285), Expect = 7.4e-22
Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 54  IPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPSNS 113
           IPLGPSL P+ SP+ SPQAPEPTTPALTPS PV PEA APSETGGSRPVLTPSSAVPSNS
Sbjct: 121 IPLGPSLPPESSPSGSPQAPEPTTPALTPSFPVDPEAGAPSETGGSRPVLTPSSAVPSNS 180

Query: 114 FPDSFLLMGLAFVILK 130
           FP  FLL+G AFVI+K
Sbjct: 181 FPHPFLLLGFAFVIMK 196

[Close]

BLAST of MELO3C028796 vs. NCBI nr
Match: XP_023549160.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-14
Identity = 59/82 (71.95%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 54  IPLGPSLSPQPSPTASPQAPEPTTPAL-----TPSSPVVPEAEAPSETGGSRPVLTP-SS 113
           I LGPS  P+ SP+ASPQAPEPTTPAL     TPSSP+VPEAEAP+ T GSRPVLTP SS
Sbjct: 121 IALGPSFPPESSPSASPQAPEPTTPALTPVAETPSSPLVPEAEAPTGTAGSRPVLTPSSS 180

Query: 114 AVPSNSFPDSFLLMGLAFVILK 130
           AV SNSFP  FL +G  FVILK
Sbjct: 181 AVRSNSFP--FLFLGFVFVILK 200

[Close]

BLAST of MELO3C028796 vs. NCBI nr
Match: XP_023006752.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima])

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-14
Identity = 58/82 (70.73%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 54  IPLGPSLSPQPSPTASPQAPEPTTPAL-----TPSSPVVPEAEAPSETGGSRPVLTP-SS 113
           I LGPS  P+ SP+ASPQAPEPTTPAL     TPSSP+VPEAE+P+ T GSRPVLTP SS
Sbjct: 121 IALGPSFPPESSPSASPQAPEPTTPALTPVAETPSSPLVPEAESPTGTAGSRPVLTPSSS 180

Query: 114 AVPSNSFPDSFLLMGLAFVILK 130
           AV SNSFP  FL +G  FVILK
Sbjct: 181 AVRSNSFP--FLFLGFVFVILK 200

[Close]

BLAST of MELO3C028796 vs. ExPASy TrEMBL
Match: A0A5D3D3P8 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00330 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.5e-31
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 52  ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS 111
           ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS
Sbjct: 120 ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS 179

Query: 112 NSFPDSFLLMGLAFVILKI 131
           NSFPDSFLLMGLAFVILKI
Sbjct: 180 NSFPDSFLLMGLAFVILKI 198

[Close]

BLAST of MELO3C028796 vs. ExPASy TrEMBL
Match: A0A1S3BGS3 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103489676 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.5e-31
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 52  ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS 111
           ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS
Sbjct: 120 ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS 179

Query: 112 NSFPDSFLLMGLAFVILKI 131
           NSFPDSFLLMGLAFVILKI
Sbjct: 180 NSFPDSFLLMGLAFVILKI 198

[Close]

BLAST of MELO3C028796 vs. ExPASy TrEMBL
Match: A0A0A0K3Y9 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G232570 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 7.5e-28
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 52  ASIPLGPSLSPQPSPTASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSAVPS 111
           ASIPLGP+L PQPSP+ASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSS VPS
Sbjct: 122 ASIPLGPTLPPQPSPSASPQAPEPTTPALTPSSPVVPEAEAPSETGGSRPVLTPSSDVPS 181

Query: 112 NSFPDSFLLMGLAFVILKI 131
           NSFP++FLLMGLAFVILK+
Sbjct: 182 NSFPNTFLLMGLAFVILKV 200

[Close]

BLAST of MELO3C028796 vs. ExPASy TrEMBL
Match: A0A6J1KWN9 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111499392 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14
Identity = 58/82 (70.73%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 54  IPLGPSLSPQPSPTASPQAPEPTTPAL-----TPSSPVVPEAEAPSETGGSRPVLTP-SS 113
           I LGPS  P+ SP+ASPQAPEPTTPAL     TPSSP+VPEAE+P+ T GSRPVLTP SS
Sbjct: 121 IALGPSFPPESSPSASPQAPEPTTPALTPVAETPSSPLVPEAESPTGTAGSRPVLTPSSS 180

Query: 114 AVPSNSFPDSFLLMGLAFVILK 130
           AV SNSFP  FL +G  FVILK
Sbjct: 181 AVRSNSFP--FLFLGFVFVILK 200

[Close]

BLAST of MELO3C028796 vs. ExPASy TrEMBL
Match: A0A6J1H4D0 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata OX=3662 GN=LOC111460366 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 57/82 (69.51%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 54  IPLGPSLSPQPSPTASPQAPEPTTPAL-----TPSSPVVPEAEAPSETGGSRPVLTP-SS 113
           I LGPS  P+ SP+ASPQAPEPTTPAL     TPSSP+VP+AEAP+ T GSRPVLTP SS
Sbjct: 121 IALGPSFPPESSPSASPQAPEPTTPALTPVAETPSSPLVPDAEAPTGTAGSRPVLTPSSS 180

Query: 114 AVPSNSFPDSFLLMGLAFVILK 130
           AV SNSFP  F+ +G  FVILK
Sbjct: 181 AVRSNSFP--FMFLGFVFVILK 200

The following BLAST results are available for this feature:

BLAST of MELO3C028796 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447160.1	1.1e-30	100.00	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Cucumis m...	[more]
XP_011659016.1	1.5e-27	91.14	non-specific lipid-transfer protein-like protein At2g13820 [Cucumis sativus] >KG...	[more]
XP_038874253.1	7.4e-22	82.89	non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida]	[more]
XP_023549160.1	1.1e-14	71.95	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp...	[more]
XP_023006752.1	2.6e-14	70.73	non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima]	[more]

BLAST of MELO3C028796 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C028796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3P8	5.5e-31	100.00	Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BGS3	5.5e-31	100.00	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=36...	[more]
A0A0A0K3Y9	7.5e-28	91.14	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G232570 PE=4 SV...	[more]
A0A6J1KWN9	1.2e-14	70.73	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima O...	[more]
A0A6J1H4D0	2.1e-14	69.51	non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata...	[more]

BLAST of MELO3C028796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028796.1	MELO3C028796.1	mRNA