MELO3C028754 (gene) Melon (DHL92) v4

Overview
NameMELO3C028754
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionEnzymatic polyprotein
Locationchr01: 17110472 .. 17111973 (+)
RNA-Seq ExpressionMELO3C028754
SyntenyMELO3C028754
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCTTCTCCCTATAAAACCATAGATGAAGGAAAGGTCCTAAAAGTTGGAGTTCGCGAAATTAAGAATATCCAACATCAAGTCAACTACACAAACAAGGTTCTTTCTACAGTATCCAAAGCAGTAGAAAAAGTAAAGAATCTGGGTCTTCCCATAAACATCAAGAAACTTGAGATTCCCCAAGCTGATCCCAATCAACCGATATTTCAACTTAACAGTTTTGATGTTGGTAAACTCAAAGATGATCCTTCAGATATCTTGTTTAAAATCAACAAGCGACTCGCCTCTTTTTCTATCAACAAAGACTCAAAAGTCAATACGACGTCAATAAAGAAAGATAAAGTTTAAACAAGGTTGGAAACCCAAAAGGAATTAATATGATAAAAAGGGACTTTTTTCATCAAGCTTCTACATCAAAGATTCTTCTAGTAGCTCAATGGGTACATATGAAGAACCACTATTCTCAACCTTCACCTCCTGATTTAGGATGGGATGACCTACACCATGAGAGGCACTCTTATGATGGAACATCTCTAATCACTTGTCATATAAATGGATATTCCAAAGCAAAAATGATGAACACATTTCAAAAAATGTTGTTAGCAGCCTCAGCCTATAGCACCAAGAAAACAACTCTTGCAATAGCCCAGATTATCATTTCAGGTTTCATTGGAAATCTAAGAAGTTAGTGGCACAACTAACTAATAGAGTAGGAAATATACCGAATCTTAATTGCTACGAAAATAGTTGTCAAGCAAGAAGGAGCGTCTGCATCTAGACAAGAAGAAGAGCTCGATATGGTCAATCAGCTGGTCTACACAACGACTAAGTATTTCATTGGTAGCACTCAGATTCATTTCAATCTTGCGACAGGGTCTCTCTTAGGGTTAAGGTGTCAGAAGATGAGCCGATACAAATGGTATAAAGATACTTTTATGGCACGACTTCCGTACTACATCGCTAAAAACTTTTATCAAACAGTGGCAACAAATTTAGTAACCAAACAAATCGACTGGTTTGAATTAACCTTTGGAGACATTTTTGCCACATTGTAAGCAATATGCGTTGATCTTTGTATAGAAAATAACCATACTACAAAGGTTATGAAAGACTCTGATTACCGAAAGGAATTAGGGACCTTCTGCAAACAGTATGGTCTTGACAAGAGGCCTAAGGATGATAGGAAGCAAAGGAGAAAGTCTACCTCCAAAAGGCTTTTTAGCAAAAGCAAGTCTAAAGATCCAGAATTTCCTTGAAGAAAGAGGAAATACTACAACAAGAACAAAAGTAAAAATAAGTATTCTTCCAAAACCAACGCCACTTGTTACAAAGGCAACTGCAAATGTCATTATTCAAATCGTTGCCCCCTGAAAGACAAAATCAATCCTTTAACTCTGGATGAAGAGACTCGAAAATCTCTTCTTTATGCCATTAGGTCTGAAGATGATGACTTTTTCCAATGAAGAATGCATCGATATCCTTAAGCCACCATCCTATAA

mRNA sequence

ATGGTTTCTTCTCCCTATAAAACCATAGATGAAGGAAAGGTCCTAAAAGTTGGAGTTCGCGAAATTAAGAATATCCAACATCAAGTCAACTACACAAACAAGGTTCTTTCTACAGTATCCAAAGCAGTAGAAAAAGTAAAGAATCTGGGTCTTCCCATAAACATCAAGAAACTTGAGATTCCCCAAGCTGATCCCAATCAACCGATATTTCAACTTAACAGTTTTGATGTTGGTAAACTCAAAGATGATCCTTCAGATATCTTGTTTAAAATCAACAAGCGACTCGCCTCTTTTTCTATCAACAAAGACTCAAAAGTCAATACGACGTCAATAAAGAAAGATAAAGTTTAAACAAGGTTGGAAACCCAAAAGGAATTAATATGATAAAAAGGGACTTTTTTCATCAAGCTTCTACATCAAAGATTCTTCTAGTAGCTCAATGGGATGGGATGACCTACACCATGAGAGGCACTCTTATGATGGAACATCTCTAATCACTTGTCATATAAATGGATATTCCAAAGCAAAAATGATGAACACATTTCAAAAAATGTTGTTAGCAGCCTCAGCCTATAGCACCAAGAAAACAACTCTTGCAATAGCCCAGATTATCATTTCAGGTTTCATTGGAAATCTAAGAAGTTAGTGGCACAACTAACTAATAGAGTAGGAAATATACCGAATCTTAATTGCTACGAAAATAGTTGTCAAGCAAGAAGGAGCGTCTGCATCTAGACAAGAAGAAGAGCTCGATATGGTCAATCAGCTGGTCTACACAACGACTAAGTATTTCATTGAAAATAACCATACTACAAAGGTTATGAAAGACTCTGATTACCGAAAGGAATTAGGGACCTTCTGCAAACAGCTTTTTAGCAAAAGCAAGTCTAAAGATCCAGAATTTCCTTGAAGAAAGAGGAAATACTACAACAAGAACAAAAGTAAAAATAAGTATTCTTCCAAAACCAACGCCACTTGTTACAAAGGCAACTGCAAATGTCATTATTCAAATCGTTGCCCCCTGAAAGACAAAATCAATCCTTTAACTCTGGATGAAGAGACTCGAAAATCTCTTCTTTATGCCATTAGGTCTGAAGATGATGACTTTTTCCAATGAAGAATGCATCGATATCCTTAAGCCACCATCCTATAA

Coding sequence (CDS)

ATGGTTTCTTCTCCCTATAAAACCATAGATGAAGGAAAGGTCCTAAAAGTTGGAGTTCGCGAAATTAAGAATATCCAACATCAAGTCAACTACACAAACAAGGTTCTTTCTACAGTATCCAAAGCAGTAGAAAAAGTAAAGAATCTGGGTCTTCCCATAAACATCAAGAAACTTGAGATTCCCCAAGCTGATCCCAATCAACCGATATTTCAACTTAACAGTTTTGATGTTGGTAAACTCAAAGATGATCCTTCAGATATCTTGTTTAAAATCAACAAGCGACTCGCCTCTTTTTCTATCAACAAAGACTCAAAAGTCAATACGACGTCAATAAAGAAAGATAAAGTTTAA

Protein sequence

MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEIPQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV
Homology
BLAST of MELO3C028754 vs. NCBI nr
Match: TYK19619.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.2e-41
Identity = 93/116 (80.17%), Postives = 102/116 (87.93%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           MVSSPYKTIDE KV KVGVREIKNIQHQ+NY NKVLS V KAVE++KN GLPINIK  EI
Sbjct: 119 MVSSPYKTIDEEKVPKVGVREIKNIQHQLNYINKVLSIVFKAVERIKNPGLPINIKNPEI 178

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           P ADPNQPIFQ NSFD+GKLKDDPSDIL +INKRLA FSINKDS+V + SI+KDK+
Sbjct: 179 PHADPNQPIFQPNSFDIGKLKDDPSDILSEINKRLAYFSINKDSEVTSLSIEKDKL 234

BLAST of MELO3C028754 vs. NCBI nr
Match: KAA0041640.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.2e-41
Identity = 93/116 (80.17%), Postives = 102/116 (87.93%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           MVSSPYKTIDE KV KVGVREIKNIQHQ+NY NKVLS V KAVE++KN GLPINIK  EI
Sbjct: 1   MVSSPYKTIDEEKVPKVGVREIKNIQHQLNYINKVLSIVFKAVERIKNPGLPINIKNPEI 60

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           P ADPNQPIFQ NSFD+GKLKDDPSDIL +INKRLA FSINKDS+V + SI+KDK+
Sbjct: 61  PHADPNQPIFQPNSFDIGKLKDDPSDILSEINKRLAYFSINKDSEVTSLSIEKDKL 116

BLAST of MELO3C028754 vs. NCBI nr
Match: KAA0033289.1 (movement protein [Cucumis melo var. makuwa] >TYK14819.1 movement protein [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 4.0e-35
Identity = 84/116 (72.41%), Postives = 95/116 (81.90%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           MVSSPYKTIDE KV KV VRE+KNIQHQ+NYTNKVLST+SKAVE+++N  L I  K  EI
Sbjct: 38  MVSSPYKTIDEEKVQKVRVREVKNIQHQLNYTNKVLSTISKAVERIENPDLSIKAKNPEI 97

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           PQADPNQPIFQ NSFD+GKLKDDPSDIL +INK L+S SINK +     S+ KDKV
Sbjct: 98  PQADPNQPIFQPNSFDIGKLKDDPSDILIEINKHLSSISINKVA----PSVDKDKV 149

BLAST of MELO3C028754 vs. NCBI nr
Match: TYK19828.1 (zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-34
Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           MVSSPYKTIDE KV KVGVREIKNIQHQ+NY NKVLSTVS+ VE+++N  L +  K  EI
Sbjct: 1   MVSSPYKTIDEDKVQKVGVREIKNIQHQLNYINKVLSTVSREVERIENPCLQMKNKNPEI 60

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           PQA+PNQPIFQ NSF++G+LKDD SD L +INKRLA+ SINKD K++  S+++DKV
Sbjct: 61  PQANPNQPIFQPNSFNIGRLKDDASDYLVEINKRLATISINKDMKISIVSMERDKV 116

BLAST of MELO3C028754 vs. NCBI nr
Match: KAA0038280.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 156.0 bits (393), Expect = 2.0e-34
Identity = 79/116 (68.10%), Postives = 97/116 (83.62%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           +VSSPYKTIDE KV KVGVREIKNIQHQ+NY NKVLSTVS+ VE+++N GL +  K  EI
Sbjct: 146 VVSSPYKTIDEDKVQKVGVREIKNIQHQLNYINKVLSTVSREVERIENPGLQMKNKNPEI 205

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           PQA+PNQPIFQ NSF++ +LKDD SD L +INKRLA+ SINKD K++  S+++DKV
Sbjct: 206 PQANPNQPIFQPNSFNISRLKDDASDYLVEINKRLAAISINKDMKISIVSMERDKV 261

BLAST of MELO3C028754 vs. ExPASy TrEMBL
Match: A0A5A7TEB7 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001160 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 93/116 (80.17%), Postives = 102/116 (87.93%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           MVSSPYKTIDE KV KVGVREIKNIQHQ+NY NKVLS V KAVE++KN GLPINIK  EI
Sbjct: 1   MVSSPYKTIDEEKVPKVGVREIKNIQHQLNYINKVLSIVFKAVERIKNPGLPINIKNPEI 60

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           P ADPNQPIFQ NSFD+GKLKDDPSDIL +INKRLA FSINKDS+V + SI+KDK+
Sbjct: 61  PHADPNQPIFQPNSFDIGKLKDDPSDILSEINKRLAYFSINKDSEVTSLSIEKDKL 116

BLAST of MELO3C028754 vs. ExPASy TrEMBL
Match: A0A5D3D7T3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00050 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 93/116 (80.17%), Postives = 102/116 (87.93%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           MVSSPYKTIDE KV KVGVREIKNIQHQ+NY NKVLS V KAVE++KN GLPINIK  EI
Sbjct: 119 MVSSPYKTIDEEKVPKVGVREIKNIQHQLNYINKVLSIVFKAVERIKNPGLPINIKNPEI 178

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           P ADPNQPIFQ NSFD+GKLKDDPSDIL +INKRLA FSINKDS+V + SI+KDK+
Sbjct: 179 PHADPNQPIFQPNSFDIGKLKDDPSDILSEINKRLAYFSINKDSEVTSLSIEKDKL 234

BLAST of MELO3C028754 vs. ExPASy TrEMBL
Match: A0A5D3CX84 (Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00080 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.9e-35
Identity = 84/116 (72.41%), Postives = 95/116 (81.90%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           MVSSPYKTIDE KV KV VRE+KNIQHQ+NYTNKVLST+SKAVE+++N  L I  K  EI
Sbjct: 38  MVSSPYKTIDEEKVQKVRVREVKNIQHQLNYTNKVLSTISKAVERIENPDLSIKAKNPEI 97

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           PQADPNQPIFQ NSFD+GKLKDDPSDIL +INK L+S SINK +     S+ KDKV
Sbjct: 98  PQADPNQPIFQPNSFDIGKLKDDPSDILIEINKHLSSISINKVA----PSVDKDKV 149

BLAST of MELO3C028754 vs. ExPASy TrEMBL
Match: A0A5D3D8E6 (Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00320 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.4e-35
Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           MVSSPYKTIDE KV KVGVREIKNIQHQ+NY NKVLSTVS+ VE+++N  L +  K  EI
Sbjct: 1   MVSSPYKTIDEDKVQKVGVREIKNIQHQLNYINKVLSTVSREVERIENPCLQMKNKNPEI 60

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           PQA+PNQPIFQ NSF++G+LKDD SD L +INKRLA+ SINKD K++  S+++DKV
Sbjct: 61  PQANPNQPIFQPNSFNIGRLKDDASDYLVEINKRLATISINKDMKISIVSMERDKV 116

BLAST of MELO3C028754 vs. ExPASy TrEMBL
Match: A0A5A7T4I9 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001400 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 9.6e-35
Identity = 79/116 (68.10%), Postives = 97/116 (83.62%), Query Frame = 0

Query: 1   MVSSPYKTIDEGKVLKVGVREIKNIQHQVNYTNKVLSTVSKAVEKVKNLGLPINIKKLEI 60
           +VSSPYKTIDE KV KVGVREIKNIQHQ+NY NKVLSTVS+ VE+++N GL +  K  EI
Sbjct: 146 VVSSPYKTIDEDKVQKVGVREIKNIQHQLNYINKVLSTVSREVERIENPGLQMKNKNPEI 205

Query: 61  PQADPNQPIFQLNSFDVGKLKDDPSDILFKINKRLASFSINKDSKVNTTSIKKDKV 117
           PQA+PNQPIFQ NSF++ +LKDD SD L +INKRLA+ SINKD K++  S+++DKV
Sbjct: 206 PQANPNQPIFQPNSFNISRLKDDASDYLVEINKRLAAISINKDMKISIVSMERDKV 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK19619.12.2e-4180.17polyprotein [Cucumis melo var. makuwa][more]
KAA0041640.12.2e-4180.17polyprotein [Cucumis melo var. makuwa][more]
KAA0033289.14.0e-3572.41movement protein [Cucumis melo var. makuwa] >TYK14819.1 movement protein [Cucumi... [more]
TYK19828.11.5e-3468.97zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var... [more]
KAA0038280.12.0e-3468.10polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TEB71.1e-4180.17Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001160 PE... [more]
A0A5D3D7T31.1e-4180.17Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00050 PE... [more]
A0A5D3CX841.9e-3572.41Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G000... [more]
A0A5D3D8E67.4e-3568.97Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo v... [more]
A0A5A7T4I99.6e-3568.10Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001400 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028754.1MELO3C028754.1mRNA