MELO3C028702 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028702
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	chr01: 4642408 .. 4644418 (+)
RNA-Seq Expression	MELO3C028702
Synteny	MELO3C028702

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAGATTATCAGGATGATGTTCCGAACCGATTATTAAAGAAACCCTCAGGGCCAATTATATCTGAAAAGCTCCCTTCTGAACCCCCAGGTTCCATTCACTCTCGATAGAGTTCATCAACAGAAGGCGTATTCATTCCAACTCCAGAAGGCCCTCGACGCTCACCAGCTATACCTTCATGTCATTCTCCCTCTATTCATCCTCCTCGATCAACACTACATGCTTCAAAACCTGATGCGGTACCTGCACACATTCCCAGATTCTTCTACTGCTGCTGGAAGTTTGTGATGTAAAGGAGAATTACCGATGAGGTACATATATCTGACAAACACCAATCCTGCATGAGTATCATAGACCTGATCCGTAAGGCTGGTTTGGAAAAACTATTTTGAATGCTGGTCCTTTTTATCCTCAGTTAATTAGAGAATTTATCGTCAATTTGCATGATGAGTTTAATAATCCTAGTAGTGCCGATTATCAGATAGTTCATATTAGAGGGTTTAAATTTGTGATTTCTCCTACTGTGATAAATGGCTTTCTTGGGAATATTATTGATATTGGCTGCTCTCCATCATGTCCTACTACTGAGGTTCTAGCTGCTGTCCTATCTGGTGGGACCTTGTCTACATGGCTTGTAAATGGAATTCTTGCGGCTGTTTTCAGCGTCAAGTATGCCATCTTCCACAAGATTGGCATTGAAAATTGGTTCCCTTCCTCACATGCCTCCAACGTATCTGCTGCTTTAGGTACCTTTTGGTATCAAATTTGCAATGATGATAAAGTAGATACGGGTGCCTTCATTTACAATCAGCTGTTGAGGCATGTTGGTTCTTTTGGGGTCAAGATTCCCATTGCTCTTCCGCGATTGTTCTCTAGTCTGCTACTTTACTTAAATAGAGTTGTGCTTACTGCAACTGATGCTCCTGGACCTGAACCTAAGACAATTGCTCTTAGCTACAAACTCTTTCAAGGCAGTAATGTGCCTGATATTGACCACGATGTTCATCCGACTCGGGGCCCACGTATTTTTGACACTACTGACTGAGATGAGTTTGCTGAAGGCTTCTATGTGGATAGAGAGTTGGCTGCCCGTATTATTATTTCTTTGACTGCTGAATCTCGTGCACTGGCTACCTTCATCACTCTGTTATCTGAACTTCGTTTAGAGGTTGATGCTCTTCTTCAACATTTGAAGTCTTTGGGACCATCTACTAGTCGTCAGTAGCCATCGTCTGGTTAATGTCATTTCTTTTCCATTTCAAAGGGGGAGTGGGGATGTGGAGATGTAATGAAATGAAGATATTTTGTAGGATGTGGGATATGAAGTTATGAGATAAGATGTATTTTTTTATGTTCTCTTTAGCAGAAGGATAATGTTTTTGTGGCTCTATTCTTTTGATGATTGTAGTCCTTTAATAAACCTTTTTAACTCCTGAATGAAATGTCTTCTGTCTCACTAAGAACAGAAGATTGTGTTTGATTATGGTACTGCTGTTGTTGAACCAGAAAAGAAATTCTATTAGACAAAAGGGGGAGTTTGTTGAAGTGTTCTTGGTCTAAAAGAATGTATTTAAATTTAAAAGAGAAGATAATCAATGAATATTTGATTCTCCTATATTTAAGGAATCACCCCAGCTATCTCTAAGAATAAAATAAGTTCCTATTCTTTAGGGATCTTATTAGAAGATGCAAGTCTGTTTATATATATGTTTTTTCGAAGAGGTTTGAGCGCGCGTGAAAATAGAGAGAAAAATTTTGGGTGCTGAGTACCAAGACGTAACTTTCGATTGATCATTGTAGTGGCTGCGGCTGCAACGAAAGGTAGTTTATTTATCATGACTTCTGGAGTAACATGACTACCTAAAGTAAAGTTTTGTAGATGAGCAATATACAGAATGAATCTATGGATGGTTTGATTAATAAAGTCACTCATACATTCAGGGGGAGCTTGACCATCAGATGCTATTGACGGGAGTCTTCTTATTCCAAGGGGAGCTTGGAGTATGA

mRNA sequence

ATGGATTCAGATTATCAGGATGATGTTCCGAACCGATTATTAAAGAAACCCTCAGGGCCAATTATATCTGAAAAGCTCCCTTCTGAACCCCCAGAAGGCGTATTCATTCCAACTCCAGAAGGCCCTCGACGCTCACCAGCTATACCTTCATGTCATTCTCCCTCTATTCATCCTCCTCGATCAACACTACATGCTTCAAAACCTGATGCGTTAATTAGAGAATTTATCGTCAATTTGCATGATGAGTTTAATAATCCTAGTAGTGCCGATTATCAGATAGTTCATATTAGAGGGTTTAAATTTGTGATTTCTCCTACTGTGATAAATGGCTTTCTTGGGAATATTATTGATATTGGCTGCTCTCCATCATGTCCTACTACTGAGGTTCTAGCTGCTGTCCTATCTGGTGGGACCTTGTCTACATGGCTTGTAAATGGAATTCTTGCGGCTGTTTTCAGCGTCAAGTATGCCATCTTCCACAAGATTGGCATTGAAAATTGGTTCCCTTCCTCACATGCCTCCAACGTATCTGCTGCTTTAGGTACCTTTTGGTATCAAATTTGCAATGATGATAAAGTAGATACGGGTGCCTTCATTTACAATCAGCTGTTGAGGCATGTTGGTTCTTTTGGGGTCAAGATTCCCATTGCTCTTCCGCGATTGTTCTCTAGTCTGCTACTTTACTTAAATAGAGTTGTGCTTACTGCAACTGATGCTCCTGGACCTGAACCTAAGACAATTGCTCTTAGCTACAAACTCTTTCAAGGCAGTAATGTGCCTGATATTGACCACGATGTTCATCCGACTCGGGGCCCACGCTTCTATGTGGATAGAGAGTTGGCTGCCCGTATTATTATTTCTTTGACTGCTGAATCTCGTGCACTGGCTACCTTCATCACTCTGTTATCTGAACTTCGTTTAGAGGGGGAGCTTGACCATCAGATGCTATTGACGGGAGTCTTCTTATTCCAAGGGGAGCTTGGAGTATGA

Coding sequence (CDS)

ATGGATTCAGATTATCAGGATGATGTTCCGAACCGATTATTAAAGAAACCCTCAGGGCCAATTATATCTGAAAAGCTCCCTTCTGAACCCCCAGAAGGCGTATTCATTCCAACTCCAGAAGGCCCTCGACGCTCACCAGCTATACCTTCATGTCATTCTCCCTCTATTCATCCTCCTCGATCAACACTACATGCTTCAAAACCTGATGCGTTAATTAGAGAATTTATCGTCAATTTGCATGATGAGTTTAATAATCCTAGTAGTGCCGATTATCAGATAGTTCATATTAGAGGGTTTAAATTTGTGATTTCTCCTACTGTGATAAATGGCTTTCTTGGGAATATTATTGATATTGGCTGCTCTCCATCATGTCCTACTACTGAGGTTCTAGCTGCTGTCCTATCTGGTGGGACCTTGTCTACATGGCTTGTAAATGGAATTCTTGCGGCTGTTTTCAGCGTCAAGTATGCCATCTTCCACAAGATTGGCATTGAAAATTGGTTCCCTTCCTCACATGCCTCCAACGTATCTGCTGCTTTAGGTACCTTTTGGTATCAAATTTGCAATGATGATAAAGTAGATACGGGTGCCTTCATTTACAATCAGCTGTTGAGGCATGTTGGTTCTTTTGGGGTCAAGATTCCCATTGCTCTTCCGCGATTGTTCTCTAGTCTGCTACTTTACTTAAATAGAGTTGTGCTTACTGCAACTGATGCTCCTGGACCTGAACCTAAGACAATTGCTCTTAGCTACAAACTCTTTCAAGGCAGTAATGTGCCTGATATTGACCACGATGTTCATCCGACTCGGGGCCCACGCTTCTATGTGGATAGAGAGTTGGCTGCCCGTATTATTATTTCTTTGACTGCTGAATCTCGTGCACTGGCTACCTTCATCACTCTGTTATCTGAACTTCGTTTAGAGGGGGAGCTTGACCATCAGATGCTATTGACGGGAGTCTTCTTATTCCAAGGGGAGCTTGGAGTATGA

Protein sequence

MDSDYQDDVPNRLLKKPSGPIISEKLPSEPPEGVFIPTPEGPRRSPAIPSCHSPSIHPPRSTLHASKPDALIREFIVNLHDEFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLSTWLVNGILAAVFSVKYAIFHKIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPRLFSSLLLYLNRVVLTATDAPGPEPKTIALSYKLFQGSNVPDIDHDVHPTRGPRFYVDRELAARIIISLTAESRALATFITLLSELRLEGELDHQMLLTGVFLFQGELGV

Homology

[Close]

BLAST of MELO3C028702 vs. NCBI nr
Match: KAA0050559.1 (uncharacterized protein E6C27_scaffold673G00130 [Cucumis melo var. makuwa] >TYK18799.1 uncharacterized protein E5676_scaffold945G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 435.6 bits (1119), Expect = 3.7e-118
Identity = 238/308 (77.27%), Postives = 242/308 (78.57%), Query Frame = 0


Query: 1   MDSDYQDDVPNRLLKKPSGPIISEKLPSEPPEGVFIPTPEGPRRSPAIPSCHSPSIHPPR 60
           MDSDYQDD                   S   EGVFIPTPEGPRRSPAIPSCHSPSIHPP+
Sbjct: 75  MDSDYQDD-------------------SSSTEGVFIPTPEGPRRSPAIPSCHSPSIHPPQ 134

Query: 61  STLHASKPDALIREFIVNLHDEFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGC 120
           STLHASKPDALI EFIVNLHDEFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGC
Sbjct: 135 STLHASKPDALIIEFIVNLHDEFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGC 194

Query: 121 SPSCPTTEVLAAVLSGGTLSTWLVNGILAAVFSVKYAIFHKIGIENWFPSSHASNVSAAL 180
           SPSCPTTEVLAAVLSGGTLSTW VNGILAAVF+VKY +                      
Sbjct: 195 SPSCPTTEVLAAVLSGGTLSTWPVNGILAAVFNVKYLL---------------------- 254

Query: 181 GTFWYQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPRLFSSLLLYLNRVVLTATDAP 240
               YQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPRLFSSLLL+LNRVVLTATDAP
Sbjct: 255 ----YQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPRLFSSLLLHLNRVVLTATDAP 314

Query: 241 GPEPKTIALSYKLFQGSNVPDIDHDVHPTRGPRFYVDRELAARIIISLTAESRALATFIT 300
           GPEPKTIALSYKLFQGSNVPDIDHD              LAARIIISLTAESRALATFIT
Sbjct: 315 GPEPKTIALSYKLFQGSNVPDIDHD--------------LAARIIISLTAESRALATFIT 323

Query: 301 LLSELRLE 309
           LLSE RLE
Sbjct: 375 LLSERRLE 323

[Close]

BLAST of MELO3C028702 vs. NCBI nr
Match: TYJ99878.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 406.8 bits (1044), Expect = 1.8e-109
Identity = 235/380 (61.84%), Postives = 248/380 (65.26%), Query Frame = 0


Query: 1    MDSDYQDDVP-NRLLKKPSGPIISEKLPSEPP-----------EGVFIPTPEGPRRSPAI 60
            MDSD QDDV   RLLKKPS P+I E+ PS+P            EGVFIPT  GPR SPAI
Sbjct: 783  MDSDDQDDVSLIRLLKKPSNPVIIERFPSDPSGSIHSQESSSIEGVFIPTLGGPRSSPAI 842

Query: 61   PSCHSPSIHPPRSTLHAS----------------------------------------KP 120
            PS HSPSIHPPRS L  S                                        KP
Sbjct: 843  PSGHSPSIHPPRSKLPTSQSDVVPTHIPRIATAAHIPPPTDDPIAPSSEGRPKSPKGPKP 902

Query: 121  ----------------------------DALIREFIVNLHDEFNNPSSADYQIVHIRGFK 180
                                        D LIREFIVNL D FN+PSSADY  VHIR FK
Sbjct: 903  QKEKLNRPGEMLPRNVQRWKFVMQRRIADELIREFIVNLPDVFNDPSSADYLRVHIREFK 962

Query: 181  FVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLSTWLVNGILAAVFSVKYAIFH 240
            FVISPTVINGFLGN +DI CS SCPTTEVLA VLSGGTLSTW VNGI AA  SVKYAI H
Sbjct: 963  FVISPTVINGFLGNTVDIDCSLSCPTTEVLATVLSGGTLSTWPVNGIHAAALSVKYAILH 1022

Query: 241  KIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPR 288
            KIGI NWFPS HAS++S ALGTF YQICNDDKVDTGAFIYNQLLRHVGSFGVK+ IALPR
Sbjct: 1023 KIGIANWFPSLHASSISTALGTFLYQICNDDKVDTGAFIYNQLLRHVGSFGVKVLIALPR 1082

[Close]

BLAST of MELO3C028702 vs. NCBI nr
Match: TYK07787.1 (uncharacterized protein E5676_scaffold1737G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 404.8 bits (1039), Expect = 7.0e-109
Identity = 243/407 (59.71%), Postives = 251/407 (61.67%), Query Frame = 0


Query: 1   MDSDYQDDVP-NRLLKKPSGPIISEKLPSEPPEGVFIPTPEGPRRSPAIPSCHSPSIHPP 60
           MDSD QDDV   RLLKKPSG            EGVFIPT EGPRRS AIPS HS S+HPP
Sbjct: 67  MDSDDQDDVSLIRLLKKPSG---------SSTEGVFIPTLEGPRRSSAIPSDHSSSVHPP 126

Query: 61  RSTLHASKPDA------------------------------------------------- 120
           RSTL ASKPDA                                                 
Sbjct: 127 RSTLPASKPDAVPAHIPGFSITAYEEQTDVSQNDDQCASFNQADIPHEDIPPPTDDPIAP 186

Query: 121 -------------------------------------------------LIREFIVNLHD 180
                                                            LI EFIVNL D
Sbjct: 187 PSEGRPKSPKGRKKIPANISFVPIDGIFFHHEESVRRWKFVMQRRIADELIGEFIVNLPD 246

Query: 181 EFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLST 240
           EFNNPSSADYQ VHIRGFKFVISP VINGFLGNI+DI CSPSCPTTEVL AVLSGGTLST
Sbjct: 247 EFNNPSSADYQTVHIRGFKFVISPAVINGFLGNIVDIDCSPSCPTTEVLVAVLSGGTLST 306

Query: 241 WLVNGILAAVFSVKYAIFHKIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYN 300
           W VNGI A   SVKYAI HKIGI NWFPSSHAS+VSAALGTF YQICNDDKVDTGAFIYN
Sbjct: 307 WPVNGIPAVALSVKYAILHKIGIANWFPSSHASSVSAALGTFLYQICNDDKVDTGAFIYN 366

Query: 301 QLLRHVGSFGVKIPIALPRLFSSLLLYLNRVVLTATDAPGPEPKTIALSYKLFQGSNVPD 309
           QLLRHVGSFGVKIPIALPRLFSSLLL+LNR VL ATD  GPEPKTIALS +LFQGS+VPD
Sbjct: 367 QLLRHVGSFGVKIPIALPRLFSSLLLHLNRAVLIATDPSGPEPKTIALSCRLFQGSHVPD 426

[Close]

BLAST of MELO3C028702 vs. NCBI nr
Match: KAA0050645.1 (uncharacterized protein E6C27_scaffold673G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 402.5 bits (1033), Expect = 3.5e-108
Identity = 240/406 (59.11%), Postives = 253/406 (62.32%), Query Frame = 0


Query: 1   MDSDYQDDVPNRLLKKPSGPIISEKLPSEPPEGVFIPTPEGPRRSPAIPSCHSPSIHPPR 60
           MDSD QDD+P+    +P G I S++  S   EGVFIPT EGPRRS AIPS HS S+HPPR
Sbjct: 67  MDSDDQDDLPS----EPLGSIHSQE--SSSTEGVFIPTLEGPRRSSAIPSDHSSSVHPPR 126

Query: 61  STLHASKPDA-------------------------------------------------- 120
           STL ASKPDA                                                  
Sbjct: 127 STLPASKPDAVPAHIPGFSITAYEEQTDVSQNDDQCASFNQADIPHEDIPPPTDDPIAPP 186

Query: 121 ------------------------------------------------LIREFIVNLHDE 180
                                                           LI EFIVNL DE
Sbjct: 187 SEGRPKSPKGRKKIPANISFVPIDGIFFHHEESVRRWKFVMQRRIADELIGEFIVNLPDE 246

Query: 181 FNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLSTW 240
           FNNPSSADYQ VHIRGFKFVISP VINGFLGNI+DI CSPSCPTTEVL AVLSGGTLSTW
Sbjct: 247 FNNPSSADYQTVHIRGFKFVISPAVINGFLGNIVDIDCSPSCPTTEVLVAVLSGGTLSTW 306

Query: 241 LVNGILAAVFSVKYAIFHKIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYNQ 300
            VNGI A   SVKYAI HKIGI NWFPSSHAS+VSAALGTF YQICNDDKVDTGAFIYNQ
Sbjct: 307 PVNGIPAVALSVKYAILHKIGIANWFPSSHASSVSAALGTFLYQICNDDKVDTGAFIYNQ 366

Query: 301 LLRHVGSFGVKIPIALPRLFSSLLLYLNRVVLTATDAPGPEPKTIALSYKLFQGSNVPDI 309
           LLRHVGSFGVKIPIALPRLFSSLLL+LNR VL ATD  GPEPKTIALS +LFQGS+VPDI
Sbjct: 367 LLRHVGSFGVKIPIALPRLFSSLLLHLNRAVLIATDPSGPEPKTIALSCRLFQGSHVPDI 426

[Close]

BLAST of MELO3C028702 vs. NCBI nr
Match: KAA0048225.1 (uncharacterized protein E6C27_scaffold63G001400 [Cucumis melo var. makuwa])

HSP 1 Score: 396.7 bits (1018), Expect = 1.9e-106
Identity = 240/462 (51.95%), Postives = 263/462 (56.93%), Query Frame = 0


Query: 1   MDSDYQDDVP-NRLLKKPSGPIISEKLPSEP-----------PEGVFIPTPEGPRRSPAI 60
           MDSD QD+V   RLLKKPSG + +E+LPS+P            EGVFIPT   PRRSPAI
Sbjct: 98  MDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSGSIHSQESSSTEGVFIPTSGDPRRSPAI 157

Query: 61  PSCHSPSIHPPRSTLHASKPDA-------------------------------------- 120
           PS HSPS+HP RS L  S+PD                                       
Sbjct: 158 PSGHSPSVHPHRSKLPISQPDVVPAHIPEIATTAHIPPPTDDPIAPSSEGRPKKKIPANV 217

Query: 121 ------------------------------LIREFIVNLHDEFNNPSSADYQIVHIRGFK 180
                                         LIREFIVNL D+FN+PSS +YQ VHIRGFK
Sbjct: 218 PSVPIDGIYFLHEESVHCWKFVMQRRIADELIREFIVNLPDKFNDPSSDNYQTVHIRGFK 277

Query: 181 FVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLSTWLVNGILAAVFSVKYAIFH 240
           FVISPTVINGFLGN +DI CSPSCPT EVL  VL GGTLSTW VNGI  A  S+KYAI H
Sbjct: 278 FVISPTVINGFLGNTVDIDCSPSCPTIEVLTNVLYGGTLSTWPVNGIPTAAPSIKYAILH 337

Query: 241 KIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPR 300
           KIGI  WFPSSHA ++SAALGTF YQICN DKVD GAFIYNQLLRHVGSFGVK+PIA PR
Sbjct: 338 KIGIAKWFPSSHALSISAALGTFLYQICNSDKVDMGAFIYNQLLRHVGSFGVKVPIAFPR 397

Query: 301 LFSSLLLYLNRVVLTATDAPGPEPKTIALSYKLFQGSNVPDIDHDVHPTRGPR------- 309
           LFSSLLL+LN  VLT +DAP  EPKTIALSY+LFQGS+VPDIDHDVHPTRGPR       
Sbjct: 398 LFSSLLLHLNGAVLTGSDAPRLEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFGTTDW 457

[Close]

BLAST of MELO3C028702 vs. ExPASy TrEMBL
Match: A0A5D3D5H3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00130 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.8e-118
Identity = 238/308 (77.27%), Postives = 242/308 (78.57%), Query Frame = 0


Query: 1   MDSDYQDDVPNRLLKKPSGPIISEKLPSEPPEGVFIPTPEGPRRSPAIPSCHSPSIHPPR 60
           MDSDYQDD                   S   EGVFIPTPEGPRRSPAIPSCHSPSIHPP+
Sbjct: 75  MDSDYQDD-------------------SSSTEGVFIPTPEGPRRSPAIPSCHSPSIHPPQ 134

Query: 61  STLHASKPDALIREFIVNLHDEFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGC 120
           STLHASKPDALI EFIVNLHDEFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGC
Sbjct: 135 STLHASKPDALIIEFIVNLHDEFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGC 194

Query: 121 SPSCPTTEVLAAVLSGGTLSTWLVNGILAAVFSVKYAIFHKIGIENWFPSSHASNVSAAL 180
           SPSCPTTEVLAAVLSGGTLSTW VNGILAAVF+VKY +                      
Sbjct: 195 SPSCPTTEVLAAVLSGGTLSTWPVNGILAAVFNVKYLL---------------------- 254

Query: 181 GTFWYQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPRLFSSLLLYLNRVVLTATDAP 240
               YQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPRLFSSLLL+LNRVVLTATDAP
Sbjct: 255 ----YQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPRLFSSLLLHLNRVVLTATDAP 314

Query: 241 GPEPKTIALSYKLFQGSNVPDIDHDVHPTRGPRFYVDRELAARIIISLTAESRALATFIT 300
           GPEPKTIALSYKLFQGSNVPDIDHD              LAARIIISLTAESRALATFIT
Sbjct: 315 GPEPKTIALSYKLFQGSNVPDIDHD--------------LAARIIISLTAESRALATFIT 323

Query: 301 LLSELRLE 309
           LLSE RLE
Sbjct: 375 LLSERRLE 323

[Close]

BLAST of MELO3C028702 vs. ExPASy TrEMBL
Match: A0A5D3BP36 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00260 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 8.9e-110
Identity = 235/380 (61.84%), Postives = 248/380 (65.26%), Query Frame = 0


Query: 1    MDSDYQDDVP-NRLLKKPSGPIISEKLPSEPP-----------EGVFIPTPEGPRRSPAI 60
            MDSD QDDV   RLLKKPS P+I E+ PS+P            EGVFIPT  GPR SPAI
Sbjct: 783  MDSDDQDDVSLIRLLKKPSNPVIIERFPSDPSGSIHSQESSSIEGVFIPTLGGPRSSPAI 842

Query: 61   PSCHSPSIHPPRSTLHAS----------------------------------------KP 120
            PS HSPSIHPPRS L  S                                        KP
Sbjct: 843  PSGHSPSIHPPRSKLPTSQSDVVPTHIPRIATAAHIPPPTDDPIAPSSEGRPKSPKGPKP 902

Query: 121  ----------------------------DALIREFIVNLHDEFNNPSSADYQIVHIRGFK 180
                                        D LIREFIVNL D FN+PSSADY  VHIR FK
Sbjct: 903  QKEKLNRPGEMLPRNVQRWKFVMQRRIADELIREFIVNLPDVFNDPSSADYLRVHIREFK 962

Query: 181  FVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLSTWLVNGILAAVFSVKYAIFH 240
            FVISPTVINGFLGN +DI CS SCPTTEVLA VLSGGTLSTW VNGI AA  SVKYAI H
Sbjct: 963  FVISPTVINGFLGNTVDIDCSLSCPTTEVLATVLSGGTLSTWPVNGIHAAALSVKYAILH 1022

Query: 241  KIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPR 288
            KIGI NWFPS HAS++S ALGTF YQICNDDKVDTGAFIYNQLLRHVGSFGVK+ IALPR
Sbjct: 1023 KIGIANWFPSLHASSISTALGTFLYQICNDDKVDTGAFIYNQLLRHVGSFGVKVLIALPR 1082

[Close]

BLAST of MELO3C028702 vs. ExPASy TrEMBL
Match: A0A5D3C774 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00750 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 3.4e-109
Identity = 243/407 (59.71%), Postives = 251/407 (61.67%), Query Frame = 0


Query: 1   MDSDYQDDVP-NRLLKKPSGPIISEKLPSEPPEGVFIPTPEGPRRSPAIPSCHSPSIHPP 60
           MDSD QDDV   RLLKKPSG            EGVFIPT EGPRRS AIPS HS S+HPP
Sbjct: 67  MDSDDQDDVSLIRLLKKPSG---------SSTEGVFIPTLEGPRRSSAIPSDHSSSVHPP 126

Query: 61  RSTLHASKPDA------------------------------------------------- 120
           RSTL ASKPDA                                                 
Sbjct: 127 RSTLPASKPDAVPAHIPGFSITAYEEQTDVSQNDDQCASFNQADIPHEDIPPPTDDPIAP 186

Query: 121 -------------------------------------------------LIREFIVNLHD 180
                                                            LI EFIVNL D
Sbjct: 187 PSEGRPKSPKGRKKIPANISFVPIDGIFFHHEESVRRWKFVMQRRIADELIGEFIVNLPD 246

Query: 181 EFNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLST 240
           EFNNPSSADYQ VHIRGFKFVISP VINGFLGNI+DI CSPSCPTTEVL AVLSGGTLST
Sbjct: 247 EFNNPSSADYQTVHIRGFKFVISPAVINGFLGNIVDIDCSPSCPTTEVLVAVLSGGTLST 306

Query: 241 WLVNGILAAVFSVKYAIFHKIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYN 300
           W VNGI A   SVKYAI HKIGI NWFPSSHAS+VSAALGTF YQICNDDKVDTGAFIYN
Sbjct: 307 WPVNGIPAVALSVKYAILHKIGIANWFPSSHASSVSAALGTFLYQICNDDKVDTGAFIYN 366

Query: 301 QLLRHVGSFGVKIPIALPRLFSSLLLYLNRVVLTATDAPGPEPKTIALSYKLFQGSNVPD 309
           QLLRHVGSFGVKIPIALPRLFSSLLL+LNR VL ATD  GPEPKTIALS +LFQGS+VPD
Sbjct: 367 QLLRHVGSFGVKIPIALPRLFSSLLLHLNRAVLIATDPSGPEPKTIALSCRLFQGSHVPD 426

[Close]

BLAST of MELO3C028702 vs. ExPASy TrEMBL
Match: A0A5A7UAL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001160 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.7e-108
Identity = 240/406 (59.11%), Postives = 253/406 (62.32%), Query Frame = 0


Query: 1   MDSDYQDDVPNRLLKKPSGPIISEKLPSEPPEGVFIPTPEGPRRSPAIPSCHSPSIHPPR 60
           MDSD QDD+P+    +P G I S++  S   EGVFIPT EGPRRS AIPS HS S+HPPR
Sbjct: 67  MDSDDQDDLPS----EPLGSIHSQE--SSSTEGVFIPTLEGPRRSSAIPSDHSSSVHPPR 126

Query: 61  STLHASKPDA-------------------------------------------------- 120
           STL ASKPDA                                                  
Sbjct: 127 STLPASKPDAVPAHIPGFSITAYEEQTDVSQNDDQCASFNQADIPHEDIPPPTDDPIAPP 186

Query: 121 ------------------------------------------------LIREFIVNLHDE 180
                                                           LI EFIVNL DE
Sbjct: 187 SEGRPKSPKGRKKIPANISFVPIDGIFFHHEESVRRWKFVMQRRIADELIGEFIVNLPDE 246

Query: 181 FNNPSSADYQIVHIRGFKFVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLSTW 240
           FNNPSSADYQ VHIRGFKFVISP VINGFLGNI+DI CSPSCPTTEVL AVLSGGTLSTW
Sbjct: 247 FNNPSSADYQTVHIRGFKFVISPAVINGFLGNIVDIDCSPSCPTTEVLVAVLSGGTLSTW 306

Query: 241 LVNGILAAVFSVKYAIFHKIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYNQ 300
            VNGI A   SVKYAI HKIGI NWFPSSHAS+VSAALGTF YQICNDDKVDTGAFIYNQ
Sbjct: 307 PVNGIPAVALSVKYAILHKIGIANWFPSSHASSVSAALGTFLYQICNDDKVDTGAFIYNQ 366

Query: 301 LLRHVGSFGVKIPIALPRLFSSLLLYLNRVVLTATDAPGPEPKTIALSYKLFQGSNVPDI 309
           LLRHVGSFGVKIPIALPRLFSSLLL+LNR VL ATD  GPEPKTIALS +LFQGS+VPDI
Sbjct: 367 LLRHVGSFGVKIPIALPRLFSSLLLHLNRAVLIATDPSGPEPKTIALSCRLFQGSHVPDI 426

[Close]

BLAST of MELO3C028702 vs. ExPASy TrEMBL
Match: A0A5A7U3J8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001400 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 9.2e-107
Identity = 240/462 (51.95%), Postives = 263/462 (56.93%), Query Frame = 0


Query: 1   MDSDYQDDVP-NRLLKKPSGPIISEKLPSEP-----------PEGVFIPTPEGPRRSPAI 60
           MDSD QD+V   RLLKKPSG + +E+LPS+P            EGVFIPT   PRRSPAI
Sbjct: 98  MDSDDQDNVSLIRLLKKPSGLVTAERLPSDPSGSIHSQESSSTEGVFIPTSGDPRRSPAI 157

Query: 61  PSCHSPSIHPPRSTLHASKPDA-------------------------------------- 120
           PS HSPS+HP RS L  S+PD                                       
Sbjct: 158 PSGHSPSVHPHRSKLPISQPDVVPAHIPEIATTAHIPPPTDDPIAPSSEGRPKKKIPANV 217

Query: 121 ------------------------------LIREFIVNLHDEFNNPSSADYQIVHIRGFK 180
                                         LIREFIVNL D+FN+PSS +YQ VHIRGFK
Sbjct: 218 PSVPIDGIYFLHEESVHCWKFVMQRRIADELIREFIVNLPDKFNDPSSDNYQTVHIRGFK 277

Query: 181 FVISPTVINGFLGNIIDIGCSPSCPTTEVLAAVLSGGTLSTWLVNGILAAVFSVKYAIFH 240
           FVISPTVINGFLGN +DI CSPSCPT EVL  VL GGTLSTW VNGI  A  S+KYAI H
Sbjct: 278 FVISPTVINGFLGNTVDIDCSPSCPTIEVLTNVLYGGTLSTWPVNGIPTAAPSIKYAILH 337

Query: 241 KIGIENWFPSSHASNVSAALGTFWYQICNDDKVDTGAFIYNQLLRHVGSFGVKIPIALPR 300
           KIGI  WFPSSHA ++SAALGTF YQICN DKVD GAFIYNQLLRHVGSFGVK+PIA PR
Sbjct: 338 KIGIAKWFPSSHALSISAALGTFLYQICNSDKVDMGAFIYNQLLRHVGSFGVKVPIAFPR 397

Query: 301 LFSSLLLYLNRVVLTATDAPGPEPKTIALSYKLFQGSNVPDIDHDVHPTRGPR------- 309
           LFSSLLL+LN  VLT +DAP  EPKTIALSY+LFQGS+VPDIDHDVHPTRGPR       
Sbjct: 398 LFSSLLLHLNGAVLTGSDAPRLEPKTIALSYRLFQGSHVPDIDHDVHPTRGPRIFGTTDW 457

The following BLAST results are available for this feature:

BLAST of MELO3C028702 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050559.1	3.7e-118	77.27	uncharacterized protein E6C27_scaffold673G00130 [Cucumis melo var. makuwa] >TYK1...	[more]
TYJ99878.1	1.8e-109	61.84	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK07787.1	7.0e-109	59.71	uncharacterized protein E5676_scaffold1737G00750 [Cucumis melo var. makuwa]	[more]
KAA0050645.1	3.5e-108	59.11	uncharacterized protein E6C27_scaffold673G001160 [Cucumis melo var. makuwa]	[more]
KAA0048225.1	1.9e-106	51.95	uncharacterized protein E6C27_scaffold63G001400 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C028702 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C028702 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5H3	1.8e-118	77.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BP36	8.9e-110	61.84	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G...	[more]
A0A5D3C774	3.4e-109	59.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UAL1	1.7e-108	59.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U3J8	9.2e-107	51.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C028702 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028702.1	MELO3C028702.1	mRNA