MELO3C028692 (gene) Melon (DHL92) v4

Overview
NameMELO3C028692
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTransmembrane emp24 domain-containing protein p24beta2-like
Locationchr04: 10548111 .. 10548229 (+)
RNA-Seq ExpressionMELO3C028692
SyntenyMELO3C028692
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAACAGATGCGGCCACACCAATCGTGCCCAGACCTCGTGACCACCGTGCTCAGTCTTCACCACCATCCACGAATCTCCAACTCTGAAGACCATGACTACCAAGATCTGCCTAACCAAG

mRNA sequence

TAAACAGATGCGGCCACACCAATCGTGCCCAGACCTCGTGACCACCGTGCTCAGTCTTCACCACCATCCACGAATCTCCAACTCTGAAGACCATGACTACCAAGATCTGCCTAACCAAG

Coding sequence (CDS)

ATGCGGCCACACCAATCGTGCCCAGACCTCGTGACCACCGTGCTCAGTCTTCACCACCATCCACGAATCTCCAACTCTGAAGACCATGACTACCAAGATCTGCCTAACCAA

Protein sequence

MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ
Homology
[Close]
BLAST of MELO3C028692 vs. NCBI nr
Match: KAA0046502.1 (uncharacterized protein E6C27_scaffold543G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-13
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 1  MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ 38
          MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ
Sbjct: 1  MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ 37

[Close]
BLAST of MELO3C028692 vs. NCBI nr
Match: TYJ97709.1 (transmembrane emp24 domain-containing protein p24beta2-like [Cucumis melo var. makuwa])

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-13
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 1  MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ 38
          MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ
Sbjct: 1  MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ 37

[Close]
BLAST of MELO3C028692 vs. ExPASy TrEMBL
Match: A0A5D3BF88 (Transmembrane emp24 domain-containing protein p24beta2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00020 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-13
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 1  MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ 38
          MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ
Sbjct: 1  MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ 37

[Close]
BLAST of MELO3C028692 vs. ExPASy TrEMBL
Match: A0A5A7TSV8 (ABC transporter domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00880 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-13
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 1  MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ 38
          MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ
Sbjct: 1  MRPHQSCPDLVTTVLSLHHHPRISNSEDHDYQDLPNQ 37

The following BLAST results are available for this feature:
BLAST of MELO3C028692 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0046502.14.0e-13100.00uncharacterized protein E6C27_scaffold543G00880 [Cucumis melo var. makuwa][more]
TYJ97709.14.0e-13100.00transmembrane emp24 domain-containing protein p24beta2-like [Cucumis melo var. m... [more]
BLAST of MELO3C028692 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028692 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BF881.9e-13100.00Transmembrane emp24 domain-containing protein p24beta2-like OS=Cucumis melo var.... [more]
A0A5A7TSV81.9e-13100.00ABC transporter domain-containing protein OS=Cucumis melo var. makuwa OX=1194695... [more]
BLAST of MELO3C028692 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028692.1MELO3C028692.1mRNA