MELO3C028673 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGCTAACTGTTGACTGAACCAGGAATTTGAAAGTATTGGACTTACGAGGGAGTGATGTGGAAGATCTGAATGGGCATTGGCTCAGCCATTTTCCTGATACATATACGTCATTGGTATCTCTCAATATTGCTTGTTTGGGGTCTGAGGTGAGTGTATCAGCACTGAAGCGTCTAGTGGACAGGTGTCCAAACTTAAGGACACTGCATCTCAATCGTCCAGTTCCCCTTGATAGGCATGCCAACCTACTTCGTCGTGCCCCTCAGCTGGTTGAGTTTGGTGCTGGATGCTATATGGCTGACTTGAGATCTGAAGTTTTTTCGAGCTTAACTGGGGCATTTACAAGCTGCACAGAATTGAAGAGTCTGTCAGGATTTTGGGATGTTGTCCCTGCATACCTTCCTTTCGTTTATCCAACATGCTCTCGGCTAACATCCTTAAACTTAAGCTATGCTACAATTCATGTGACGATCTTACAAAGCTTATCAGTCAATGTCATAATTTACAGAAGCTTTGG CGGCTAACTGTTGACTGAACCAGGAATTTGAAAGTATTGGACTTACGAGGGAGTGATGTGGAAGATCTGAATGGGCATTGGCTCAGCCATTTTCCTGATACATATACGTCATTGGTATCTCTCAATATTGCTTGTTTGGGGTCTGAGGTGAGTGTATCAGCACTGAAGCGTCTAGTGGACAGGTGTCCAAACTTAAGGACACTGCATCTCAATCGTCCAGTTCCCCTTGATAGGCATGCCAACCTACTTCGTCGTGCCCCTCAGCTGGTTGAGTTTGGTGCTGGATGCTATATGGCTGACTTGAGATCTGAAGTTTTTTCGAGCTTAACTGGGGCATTTACAAGCTGCACAGAATTGAAGAGTCTGTCAGGATTTTGGGATGTTGTCCCTGCATACCTTCCTTTCGTTTATCCAACATGCTCTCGGCTAACATCCTTAAACTTAAGCTATGCTACAATTCATGTGACGATCTTACAAAGCTTATCAGTCAATGTCATAATTTACAGAAGCTTTGG ATGGCTGACTTGAGATCTGAAGTTTTTTCGAGCTTAACTGGGGCATTTACAAGCTGCACAGAATTGAAGAGTCTGTCAGGATTTTGGGATGTTGTCCCTGCATACCTTCCTTTCGTTTATCCAACATGCTCTCGGCTAACATCCTTAAACTTAAGCTATGCTACAATTCATGTGACGATCTTACAAAGCTTATCAGTCAATGTCATAATTTACAGAAGCTTT MADLRSEVFSSLTGAFTSCTELKSLSGFWDVVPAYLPFVYPTCSRLTSLNLSYATIHVTILQSLSVNVIIYRSF Homology
BLAST of MELO3C028673 vs. NCBI nr
Match: XP_008451438.1 (PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Cucumis melo]) HSP 1 Score: 111.3 bits (277), Expect = 3.6e-21 Identity = 57/64 (89.06%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of MELO3C028673 vs. NCBI nr
Match: XP_038876726.1 (protein TRANSPORT INHIBITOR RESPONSE 1-like [Benincasa hispida]) HSP 1 Score: 108.2 bits (269), Expect = 3.0e-20 Identity = 55/63 (87.30%), Postives = 56/63 (88.89%), Query Frame = 0
BLAST of MELO3C028673 vs. NCBI nr
Match: NP_001267546.1 (protein TRANSPORT INHIBITOR RESPONSE 1-like [Cucumis sativus] >AGA63733.1 transport inhibitor response 1 [Cucumis sativus] >AGI15227.1 transport inhibitor response protein [Cucumis sativus] >KGN44877.1 hypothetical protein Csa_016512 [Cucumis sativus]) HSP 1 Score: 107.8 bits (268), Expect = 4.0e-20 Identity = 55/63 (87.30%), Postives = 56/63 (88.89%), Query Frame = 0
BLAST of MELO3C028673 vs. NCBI nr
Match: XP_022953789.1 (protein TRANSPORT INHIBITOR RESPONSE 1-like [Cucurbita moschata]) HSP 1 Score: 105.9 bits (263), Expect = 1.5e-19 Identity = 54/63 (85.71%), Postives = 55/63 (87.30%), Query Frame = 0
BLAST of MELO3C028673 vs. NCBI nr
Match: KAG7014398.1 (Protein TRANSPORT INHIBITOR RESPONSE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 105.9 bits (263), Expect = 1.5e-19 Identity = 54/63 (85.71%), Postives = 55/63 (87.30%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy Swiss-Prot
Match: Q570C0 (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=TIR1 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 7.5e-14 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy Swiss-Prot
Match: Q9ZR12 (GRR1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=GRH1 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.4e-12 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy Swiss-Prot
Match: Q0DKP3 (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0150500 PE=2 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 3.0e-10 Identity = 31/55 (56.36%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy Swiss-Prot
Match: Q7XVM8 (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0395600 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.5e-09 Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy Swiss-Prot
Match: Q9LTX2 (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g49980 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-06 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy TrEMBL
Match: A0A1S3BRJ6 (protein TRANSPORT INHIBITOR RESPONSE 1 OS=Cucumis melo OX=3656 GN=LOC103492732 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.7e-21 Identity = 57/64 (89.06%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy TrEMBL
Match: M1GCN5 (Transport inhibitor response 1 OS=Cucumis sativus OX=3659 GN=Csa_7G393970 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20 Identity = 55/63 (87.30%), Postives = 56/63 (88.89%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy TrEMBL
Match: A0A6J1GQR4 (protein TRANSPORT INHIBITOR RESPONSE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456212 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 7.3e-20 Identity = 54/63 (85.71%), Postives = 55/63 (87.30%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy TrEMBL
Match: A0A5A7UGH2 (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001820 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of MELO3C028673 vs. ExPASy TrEMBL
Match: A0A6J1KSA8 (protein TRANSPORT INHIBITOR RESPONSE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111497784 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.6e-19 Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = 0
BLAST of MELO3C028673 vs. TAIR 10
Match: AT3G62980.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 77.4 bits (189), Expect = 5.3e-15 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of MELO3C028673 vs. TAIR 10
Match: AT4G03190.1 (GRR1-like protein 1 ) HSP 1 Score: 72.4 bits (176), Expect = 1.7e-13 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of MELO3C028673 vs. TAIR 10
Match: AT5G49980.1 (auxin F-box protein 5 ) HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of MELO3C028673 vs. TAIR 10
Match: AT1G12820.1 (auxin signaling F-box 3 ) HSP 1 Score: 50.4 bits (119), Expect = 7.0e-07 Identity = 26/48 (54.17%), Postives = 29/48 (60.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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