MELO3C028630 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028630
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Plant transposase
Location	chr11: 8980200 .. 8980806 (+)
RNA-Seq Expression	MELO3C028630
Synteny	MELO3C028630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCGCATTGAACAAACTGAGGTGAGACGACAGTTTCAACAACAAACGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCTTGGTCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAACTATCTTTTTTGTCTCAACAAGATCACAAATATAAGGTTCTTGAAAAAGAATATTTGAAGATGAAGGAAGAAATGATAGAAATGAAAGCATTTATGTTATCTTGTTTAAAGAAACAGGTTTTTCTTTTTTTTCTTTTTGTAACTTAGATTATTTTTTTTCTCGTAGTAGTTAACTATATTTTTGGTTTCATATGAGATTATCATAGACTGAACCAAGTGAGGAACTTTCAAATGCTACTGCAAGTGTGCTTAATAGGATGAAAATTGTTTATGATGTAATTATCTTCTTATTCTAGTATTTCATATTTTTCCTTTAACAGAGTATCAATAACAATAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAGCTGCCTTGGTTCATCATGTTCCTATTGGACCACATGGGATTATAGTATGGGTTGATGCA

mRNA sequence

GAGCGCATTGAACAAACTGAGGTGAGACGACAGTTTCAACAACAAACGTGGTTGATGATGCTTTGAGTAAAGTTCTTGGCCCTGATCTTGGTCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAACTATCTTTTTTGTCTCAACAAGATCACAAATATAAGGTTCTTGAAAAAGAATATTTGAAGATGAAGGAAGAAATGAGTATCAATAACAATAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAGCTGCCTTGGTTCATCATGTTCCTATTGGACCACATGGGATTATAGTATGGGTTGATGCA

Coding sequence (CDS)

ATGAAGGAAGAAATGAGTATCAATAACAATAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAGCTGCCTTGGTTCATCATGTTCCTATTGGACCACATGGGATTATAGTATGGGTTGATGCA

Protein sequence

MKEEMSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVDA

Homology

[Close]

BLAST of MELO3C028630 vs. NCBI nr
Match: KAA0032502.1 (uncharacterized protein E6C27_scaffold465G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 3.8e-23
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 6   SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVDA 58
           SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVDA
Sbjct: 478 SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVDA 529

[Close]

BLAST of MELO3C028630 vs. NCBI nr
Match: TYK24342.1 (uncharacterized protein E5676_scaffold205G001200 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 6.1e-21
Identity = 49/56 (87.50%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 1    MKEEMSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVD 57
            M    SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDP ALVHHVPIGPH I VWVD
Sbjct: 1303 MPSPSSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTALVHHVPIGPHAIRVWVD 1358

[Close]

BLAST of MELO3C028630 vs. NCBI nr
Match: TYK18483.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 8.0e-21
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 6   SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVD 57
           SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDP ALVHHVPIGPH I VWVD
Sbjct: 210 SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTALVHHVPIGPHAISVWVD 260

[Close]

BLAST of MELO3C028630 vs. NCBI nr
Match: KAA0058414.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 8.0e-21
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 6   SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVD 57
           SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDP ALVHHVPIGPH I VWVD
Sbjct: 668 SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTALVHHVPIGPHAISVWVD 718

[Close]

BLAST of MELO3C028630 vs. NCBI nr
Match: KAA0038435.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 1   MKEEMSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVD 57
           M    SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDP A+VHH+PIGPH I VWVD
Sbjct: 235 MSSPSSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWVD 290

[Close]

BLAST of MELO3C028630 vs. ExPASy TrEMBL
Match: A0A5A7SN86 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00090 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-23
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 6   SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVDA 58
           SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVDA
Sbjct: 478 SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVDA 529

[Close]

BLAST of MELO3C028630 vs. ExPASy TrEMBL
Match: A0A5D3DLF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001200 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-21
Identity = 49/56 (87.50%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 1    MKEEMSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVD 57
            M    SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDP ALVHHVPIGPH I VWVD
Sbjct: 1303 MPSPSSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTALVHHVPIGPHAIRVWVD 1358

[Close]

BLAST of MELO3C028630 vs. ExPASy TrEMBL
Match: A0A5A7UTC4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001270 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-21
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 6   SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVD 57
           SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDP ALVHHVPIGPH I VWVD
Sbjct: 668 SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTALVHHVPIGPHAISVWVD 718

[Close]

BLAST of MELO3C028630 vs. ExPASy TrEMBL
Match: A0A5D3D4L2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12553G00010 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-21
Identity = 48/51 (94.12%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 6   SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVD 57
           SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDP ALVHHVPIGPH I VWVD
Sbjct: 210 SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTALVHHVPIGPHAISVWVD 260

[Close]

BLAST of MELO3C028630 vs. ExPASy TrEMBL
Match: A0A5A7TAN8 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G003350 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.1e-21
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 0


Query: 1   MKEEMSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPAALVHHVPIGPHGIIVWVD 57
           M    SINNNSQTKCKLLDWYGSGEIVAEGRWSSNDP A+VHH+PIGPH I VWVD
Sbjct: 235 MSSPSSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWVD 290

The following BLAST results are available for this feature:

BLAST of MELO3C028630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032502.1	3.8e-23	100.00	uncharacterized protein E6C27_scaffold465G00090 [Cucumis melo var. makuwa]	[more]
TYK24342.1	6.1e-21	87.50	uncharacterized protein E5676_scaffold205G001200 [Cucumis melo var. makuwa]	[more]
TYK18483.1	8.0e-21	94.12	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0058414.1	8.0e-21	94.12	putative TNP1-like transposon protein [Cucumis melo var. makuwa]	[more]
KAA0038435.1	1.0e-20	83.93	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C028630 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C028630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SN86	1.9e-23	100.00	DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DLF1	3.0e-21	87.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UTC4	3.9e-21	94.12	Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3D4L2	3.9e-21	94.12	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold12553G...	[more]
A0A5A7TAN8	5.1e-21	83.93	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00...	[more]

BLAST of MELO3C028630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028630.1	MELO3C028630.1	mRNA