MELO3C028622 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028622
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	S-protein homolog
Location	chr01: 5525205 .. 5525535 (-)
RNA-Seq Expression	MELO3C028622
Synteny	MELO3C028622

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCATCTCTAACACTTGCACTATCTTTACTAATTTTCTTTTTATGTAACTTACGTGCAATTCAAGGATCGATCTTCATCCAACCAATCACTACAGTTGTAATCGTCAACCAAATTGAATATGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTTCGCTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCTTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGGAAATGACGAC

mRNA sequence

ATGGGCTCATCTCTAACACTTGCACTATCTTTACTAATTTTCTTTTTATGTAACTTACGTGCAATTCAAGGATCGATCTTCATCCAACCAATCACTACAGTTGTAATCGTCAACCAAATTGAATATGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTTCGCTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCTTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGGAAATGACGAC

Coding sequence (CDS)

ATGGGCTCATCTCTAACACTTGCACTATCTTTACTAATTTTCTTTTTATGTAACTTACGTGCAATTCAAGGATCGATCTTCATCCAACCAATCACTACAGTTGTAATCGTCAACCAAATTGAATATGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTTCGCTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCTTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGGAAATGA

Protein sequence

MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK

Homology

[Close]

BLAST of MELO3C028622 vs. NCBI nr
Match: KAA0050677.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCNLRAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 108

[Close]

BLAST of MELO3C028622 vs. NCBI nr
Match: KAA0050672.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK07760.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCNLRAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 108

[Close]

BLAST of MELO3C028622 vs. NCBI nr
Match: TYK14097.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCNLRAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 108

[Close]

BLAST of MELO3C028622 vs. NCBI nr
Match: TYK13716.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 2.6e-52
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCN+RAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 108

[Close]

BLAST of MELO3C028622 vs. NCBI nr
Match: KAA0059510.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >KAA0059511.1 self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK14096.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 214.5 bits (545), Expect = 4.4e-52
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCNLRAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRD GK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDVGK 108

[Close]

BLAST of MELO3C028622 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-16
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 33  TVVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQH 92
           TVV +  +  G P+T+HCKSK DDLG+HV+   Q Y FKF+PNL  +TLFFCSF W  Q 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 93  QIYWFNIFDDKRDAG 108
           +   F+I+D +RD G
Sbjct: 89  KS--FDIYDAQRDQG 101

[Close]

BLAST of MELO3C028622 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.4e-15
Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 32  TTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLL-GTTLFFCSFTWTG 91
           + V I N++  G  + +HCKS +DDLG+ +L+    +SFKFRP+++ G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

Query: 92  QHQIYWFNIFDDKRD 106
           Q +  WFNI+DD RD
Sbjct: 98  QSK--WFNIYDDDRD 110

[Close]

BLAST of MELO3C028622 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 0


Query: 34  VVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQ 93
           V I N++  G+ + +HCKS +DDLG+ +L+    +SFKFR +++GTTLF+C FTW GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFNIFDDKRD 106
              F+I+DD RD
Sbjct: 99  --RFDIYDDDRD 108

[Close]

BLAST of MELO3C028622 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 38/107 (35.51%), Postives = 58/107 (54.21%), Query Frame = 0


Query: 3   SSLTLALSLLIFFLCNLRAIQGSIFIQPI--TTVVIVNQIEYGIPVTVHCKSKNDDLGVH 62
           S + + LS+++F++     I       P   T V + N I     +T+ C+SK+DDLG H
Sbjct: 5   SKIFVVLSIILFYV-----ISSCHGYNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEH 64

Query: 63  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAG 108
           +L  GQ + +KFRP+   TTLF C F W   + + WF+ +   RD G
Sbjct: 65  LLLHGQAFLWKFRPSWFRTTLFTCKFLW--NNNVKWFDTYRSDRDQG 104

[Close]

BLAST of MELO3C028622 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10
Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 25  SIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLLGTTLFFC 84
           S+F     TV I N +   + +  HCKSK+DDLG   L  G+ +SF F     G TL+FC
Sbjct: 41  SVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFC 100

Query: 85  SFTWTGQHQIYWFNIFDDKRDAG 108
           SF+W   ++ + F+I+ D RD+G
Sbjct: 101 SFSW--PNESHSFDIYKDHRDSG 121

[Close]

BLAST of MELO3C028622 vs. ExPASy TrEMBL
Match: A0A5A7U4C4 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00340 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.3e-53
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCNLRAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 108

[Close]

BLAST of MELO3C028622 vs. ExPASy TrEMBL
Match: A0A5A7U8G6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001600 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.3e-53
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCNLRAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 108

[Close]

BLAST of MELO3C028622 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.3e-53
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCNLRAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 108

[Close]

BLAST of MELO3C028622 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-52
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCN+RAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 108

[Close]

BLAST of MELO3C028622 vs. ExPASy TrEMBL
Match: A0A5D3CUL8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00100 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.1e-52
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MGSSLTLALSLLIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60
           MGSS TLALSLLIFFLCNLRAIQGSIFIQP+TTVVIVNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGK 109
           VL LGQGYSFKFRPNL+GTTLFFCSFTWTGQHQIYWFNIFDDKRD GK
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDVGK 108

[Close]

BLAST of MELO3C028622 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 33  TVVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQH 92
           TVV +  +  G P+T+HCKSK DDLG+HV+   Q Y FKF+PNL  +TLFFCSF W  Q 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 93  QIYWFNIFDDKRDAG 108
           +   F+I+D +RD G
Sbjct: 89  KS--FDIYDAQRDQG 101

[Close]

BLAST of MELO3C028622 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 82.0 bits (201), Expect = 3.2e-16
Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 32  TTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLL-GTTLFFCSFTWTG 91
           + V I N++  G  + +HCKS +DDLG+ +L+    +SFKFRP+++ G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

Query: 92  QHQIYWFNIFDDKRD 106
           Q +  WFNI+DD RD
Sbjct: 98  QSK--WFNIYDDDRD 110

[Close]

BLAST of MELO3C028622 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 80.9 bits (198), Expect = 7.0e-16
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 27  FIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLLGTTLFFCSF 86
           F  P TTVVI N +   +P+  HCKSKNDDLG   +++   +SF+FRP++ G TLFFC F
Sbjct: 23  FDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF 82

Query: 87  TWTGQHQIYWFNIFDDKRD 106
            W    +++WF+I+   RD
Sbjct: 83  IW--DKELHWFDIYKQSRD 99

[Close]

BLAST of MELO3C028622 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 77.4 bits (189), Expect = 7.8e-15
Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 0


Query: 34  VVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFKFRPNLLGTTLFFCSFTWTGQHQ 93
           V I N++  G+ + +HCKS +DDLG+ +L+    +SFKFR +++GTTLF+C FTW GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFNIFDDKRD 106
              F+I+DD RD
Sbjct: 99  --RFDIYDDDRD 108

[Close]

BLAST of MELO3C028622 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-13
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 12  LIFFLCNLRAIQGSIFIQPITTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLSLGQGYSFK 71
           L+FF+  +     +I  +  T+VVI N +  G+P+  HCKS+ DDLG   L+ G+ +SF 
Sbjct: 8   LLFFV--MVMFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFG 67

Query: 72  FRPNLLGTTLFFCSFTWTGQHQIYWFNIFDDKRD 106
           F P++ G TLF+C F+W  +  I  F+I+   RD
Sbjct: 68  FTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRD 97

The following BLAST results are available for this feature:

BLAST of MELO3C028622 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050677.1	1.5e-52	96.30	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0050672.1	1.5e-52	96.30	self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK07760.1 self-incom...	[more]
TYK14097.1	1.5e-52	96.30	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
TYK13716.1	2.6e-52	95.37	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0059510.1	4.4e-52	95.37	self-incompatibility protein 1 [Cucumis melo var. makuwa] >KAA0059511.1 self-inc...	[more]

BLAST of MELO3C028622 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	3.1e-16	53.33	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	4.4e-15	50.67	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
Q9FMQ4	1.1e-13	48.61	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
P0DN93	1.1e-10	35.51	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
F4JLQ5	1.5e-10	40.96	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of MELO3C028622 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4C4	7.3e-53	96.30	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A5A7U8G6	7.3e-53	96.30	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00...	[more]
A0A5D3CQA2	7.3e-53	96.30	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]
A0A5D3CTD8	1.2e-52	95.37	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3CUL8	2.1e-52	95.37	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]

BLAST of MELO3C028622 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	2.2e-17	53.33	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	3.2e-16	50.67	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	7.0e-16	46.84	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	7.8e-15	48.61	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	2.5e-13	39.36	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..106 e-value: 5.3E-22 score: 78.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 14..106
None	No IPR available	PANTHER	PTHR31232:SF53	S-PROTEIN HOMOLOG 29-RELATED	coord: 14..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028622.1	MELO3C028622.1	mRNA