MELO3C028616 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCAAAATTATCTTAATTTTTTGGGTGTTACATTCGAGGTGGTCAAAACCTCTGCCACGACCTTTGATGTATTTTGTTCATGTGGTAAATGGGCTAAGCTATCATTGTTTGGATGTGCATTGTCAATCGAAGGACGATGATTTGAGATATCGTCATTTGGTTGACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTCTGGGGAACAACCTTGTTTTGGTGTAGATCGGAGAAGTCCAATGCATACGTCGCTTTTGAAAGCTTTTGGCCAGAGTCATCGAACCATTGGCTTCATGATACATGTGAGAATGAAGGAACTTGTATTTGGATTGCTAAATAGGATGAAATTTATTTGAGAAACATACCCGCTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAGTAA TTCCAAAATTATCTTAATTTTTTGGGTGTTACATTCGAGGTGGTCAAAACCTCTGCCACGACCTTTGATGTATTTTGTTCATGTGGTAAATGGGCTAAGCTATCATTGTTTGGATGTGCATTGTCAATCGAAGGACGATGATTTGAGATATCGTCATTTGGTTGACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTCTGGGGAACAACCTTGTTTTGGTGTAGATCGGAGAAGTCCAATGCATACGTCGCTTTTGAAAGCTTTTGGCCAGAGTCATCGAACCATTGGCTTCATGATACATGTGAGAATGAAGGAACTTGTATTTGGATTGCTAAATAGGATGAAATTTATTTGAGAAACATACCCGCTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAGTAA ATGTATTTTGTTCATGTGGTAAATGGGCTAAGCTATCATTGTTTGGATGTGCATTGTCAATCGAAGGACGATGATTTGAGATATCGTCATTTGGTTGACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTCTGGGGAACAACCTTGTTTTGGTGTAGATCGGAGAAGTCCAATGCATACGTCGCTTTTGAAAGCTTTTGGCCAGAGTCATCGAACCATTGGCTTCATGATACATGTGAGAATGAAGGAACTTGTATTTGGATTGCTAAATAG MYFVHVVNGLSYHCLDVHCQSKDDDLRYRHLVDHGDDFQWNFEENFWGTTLFWCRSEKSNAYVAFESFWPESSNHWLHDTCENEGTCIWIAK Homology
BLAST of MELO3C028616 vs. NCBI nr
Match: KAA0050687.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07750.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of MELO3C028616 vs. NCBI nr
Match: XP_008462110.1 (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo]) HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of MELO3C028616 vs. NCBI nr
Match: XP_004139721.2 (S-protein homolog 74 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 8.1e-39 Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of MELO3C028616 vs. NCBI nr
Match: XP_008462115.1 (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37 Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MELO3C028616 vs. NCBI nr
Match: KAA0050661.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07770.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37 Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.5e-08 Identity = 36/90 (40.00%), Postives = 46/90 (51.11%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-07 Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 7.9e-05 Identity = 22/56 (39.29%), Postives = 35/56 (62.50%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.3e-04 Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.9e-04 Identity = 21/73 (28.77%), Postives = 39/73 (53.42%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy TrEMBL
Match: A0A5A7U8H6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00220 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy TrEMBL
Match: A0A1S3CGQ1 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500539 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy TrEMBL
Match: A0A5A7UAS6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00440 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 7.4e-38 Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy TrEMBL
Match: A0A1S3CG61 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500543 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 7.4e-38 Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 0
BLAST of MELO3C028616 vs. ExPASy TrEMBL
Match: A0A5D3DIG9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00380 PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37 Identity = 71/91 (78.02%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of MELO3C028616 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09 Identity = 36/90 (40.00%), Postives = 46/90 (51.11%), Query Frame = 0
BLAST of MELO3C028616 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08 Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of MELO3C028616 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 53.5 bits (127), Expect = 1.0e-07 Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 0
BLAST of MELO3C028616 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 47.8 bits (112), Expect = 5.6e-06 Identity = 22/56 (39.29%), Postives = 35/56 (62.50%), Query Frame = 0
BLAST of MELO3C028616 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05 Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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