MELO3C028560.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C028560.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Histone-lysine N-methyltransferase ASHR1 isoform X3
Location	chr01: 16970497 .. 16970801 (+)
RNA-Seq Expression	MELO3C028560.jh1
Synteny	MELO3C028560.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAGACCAGAATTGAAGAGAGAATGGAACTCTTCGAACAAGAAATAGCCGGAATCAAGAAAGAACTGATGAAGATGCCGGCGATCGAATCAACGCTGATCGAAATAACAAAAAACATGGAAATGATGCGACTACAGTCCGAAAAACAACAGCAAGCAATTCTATCATACATGGAAGCAAATGCGAAAGAGAGAGCGATGGCCGGAGAACGAATAAACGAATCGGATATTCAGAACTCACCGGCAACGAAATCGAAGAATGGCAAGGCGTCTTCCAGTCACGATATCGGGGAGACCAGTGC

mRNA sequence

ATGGTGCAGACCAGAATTGAAGAGAGAATGGAACTCTTCGAACAAGAAATAGCCGGAATCAAGAAAGAACTGATGAAGATGCCGGCGATCGAATCAACGCTGATCGAAATAACAAAAAACATGGAAATGATGCGACTACAGTCCGAAAAACAACAGCAAGCAATTCTATCATACATGGAAGCAAATGCGAAAGAGAGAGCGATGGCCGGAGAACGAATAAACGAATCGGATATTCAGAACTCACCGGCAACGAAATCGAAGAATGGCAAGGCGTCTTCCAGTCACGATATCGGGGAGACCAGTGC

Coding sequence (CDS)

ATGGTGCAGACCAGAATTGAAGAGAGAATGGAACTCTTCGAACAAGAAATAGCCGGAATCAAGAAAGAACTGATGAAGATGCCGGCGATCGAATCAACGCTGATCGAAATAACAAAAAACATGGAAATGATGCGACTACAGTCCGAAAAACAACAGCAAGCAATTCTATCATACATGGAAGCAAATGCGAAAGAGAGAGCGATGGCCGGAGAACGAATAAACGAATCGGATATTCAGAACTCACCGGCAACGAAATCGAAGAATGGCAAGGCGTCTTCCAGTCACGATATCGGGGAGACCAGT

Protein sequence

MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYMEANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS

Homology

[Close]

BLAST of MELO3C028560.jh1 vs. NCBI nr
Match: TYK15204.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (443), Expect = 4.38e-54
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGER+NESDIQNSPATKSK+GKASSSHDI ETS
Sbjct: 61  ANAKERAMAGERMNESDIQNSPATKSKDGKASSSHDIRETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. NCBI nr
Match: KAA0066162.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 169 bits (429), Expect = 5.95e-52
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERME FEQEI GIKKELMKMP IESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMESFEQEIVGIKKELMKMPVIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGER+NESDIQNSPATKSK+GKASSSHDI ETS
Sbjct: 61  ANAKERAMAGERMNESDIQNSPATKSKDGKASSSHDIRETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. NCBI nr
Match: KAA0052232.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (459), Expect = 1.10e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. NCBI nr
Match: TYK22240.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (459), Expect = 2.19e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. NCBI nr
Match: KAA0032454.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99900.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (459), Expect = 2.19e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CW96 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00800 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 2.12e-54
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGER+NESDIQNSPATKSK+GKASSSHDI ETS
Sbjct: 61  ANAKERAMAGERMNESDIQNSPATKSKDGKASSSHDIRETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VCU9 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G001680 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 2.88e-52
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERME FEQEI GIKKELMKMP IESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMESFEQEIVGIKKELMKMPVIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGER+NESDIQNSPATKSK+GKASSSHDI ETS
Sbjct: 61  ANAKERAMAGERMNESDIQNSPATKSKDGKASSSHDIRETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U908 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00450 PE=4 SV=1)

HSP 1 Score: 181 bits (459), Expect = 5.33e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DFT1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001370 PE=4 SV=1)

HSP 1 Score: 181 bits (459), Expect = 1.06e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101

[Close]

BLAST of MELO3C028560.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SMQ7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00120 PE=4 SV=1)

HSP 1 Score: 181 bits (459), Expect = 1.06e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101
           ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETS 101

The following BLAST results are available for this feature:

BLAST of MELO3C028560.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15204.1	4.38e-54	97.03	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]
KAA0066162.1	5.95e-52	94.06	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]
KAA0052232.1	1.10e-51	100.00	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
TYK22240.1	2.19e-50	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032454.1	2.19e-50	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99900.1 Ty3/gyp...	[more]

BLAST of MELO3C028560.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C028560.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CW96	2.12e-54	97.03	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7VCU9	2.88e-52	94.06	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7U908	5.33e-52	100.00	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3DFT1	1.06e-50	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7SMQ7	1.06e-50	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of MELO3C028560.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028560.jh1.t1	MELO3C028560.jh1.t1	mRNA