MELO3C028560 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028560
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Histone-lysine N-methyltransferase ASHR1 isoform X3
Location	chr04: 23303696 .. 23304004 (-)
RNA-Seq Expression	MELO3C028560
Synteny	MELO3C028560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAGACCAGAATTGAAGAGAGAATGGAACTCTTCGAACAAGAAATAGCCGGAATCAAGAAAGAACTGATGAAGATGCCGGCGATCGAATCAACGCTGATCGAAATAACAAAAAACATGGAAATGATGCGACTACAGTCCGAAAAACAACAGCAAGCAATTCTATCATACATGGAAGCAAATGCGAAAGAGAGAGCGATGACCGGAGAACGAATAAACGAATCGGATATTCAGAACTCACCGGCAACGAAATCGAAGAATGGCAAGGCGTCTTCCAGTCACGATATCGGGGAGACCAGTGCGGAA

mRNA sequence

ATGGTGCAGACCAGAATTGAAGAGAGAATGGAACTCTTCGAACAAGAAATAGCCGGAATCAAGAAAGAACTGATGAAGATGCCGGCGATCGAATCAACGCTGATCGAAATAACAAAAAACATGGAAATGATGCGACTACAGTCCGAAAAACAACAGCAAGCAATTCTATCATACATGGAAGCAAATGCGAAAGAGAGAGCGATGACCGGAGAACGAATAAACGAATCGGATATTCAGAACTCACCGGCAACGAAATCGAAGAATGGCAAGGCGTCTTCCAGTCACGATATCGGGGAGACCAGTGCGGAA

Coding sequence (CDS)

ATGGTGCAGACCAGAATTGAAGAGAGAATGGAACTCTTCGAACAAGAAATAGCCGGAATCAAGAAAGAACTGATGAAGATGCCGGCGATCGAATCAACGCTGATCGAAATAACAAAAAACATGGAAATGATGCGACTACAGTCCGAAAAACAACAGCAAGCAATTCTATCATACATGGAAGCAAATGCGAAAGAGAGAGCGATGACCGGAGAACGAATAAACGAATCGGATATTCAGAACTCACCGGCAACGAAATCGAAGAATGGCAAGGCGTCTTCCAGTCACGATATCGGGGAGACCAGTGCGGAA

Protein sequence

MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYMEANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE

Homology

[Close]

BLAST of MELO3C028560 vs. NCBI nr
Match: KAA0048423.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-43
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. NCBI nr
Match: TYK28876.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-43
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. NCBI nr
Match: TYK30083.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAM GERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. NCBI nr
Match: KAA0032454.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99900.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAM GERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. NCBI nr
Match: TYK22240.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAM GERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. ExPASy TrEMBL
Match: A0A5D3DYS4 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00230 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. ExPASy TrEMBL
Match: A0A5A7TXP9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001500 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. ExPASy TrEMBL
Match: A0A5A7SMQ7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00120 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAM GERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. ExPASy TrEMBL
Match: A0A5D3E1V9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00560 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAM GERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

[Close]

BLAST of MELO3C028560 vs. ExPASy TrEMBL
Match: A0A5D3BU88 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00280 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60
           MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME
Sbjct: 1   MVQTRIEERMELFEQEIAGIKKELMKMPAIESTLIEITKNMEMMRLQSEKQQQAILSYME 60

Query: 61  ANAKERAMTGERINESDIQNSPATKSKNGKASSSHDIGETSAE 104
           ANAKERAM GERINESDIQNSPATKSKNGKASSSHDIGETSAE
Sbjct: 61  ANAKERAMAGERINESDIQNSPATKSKNGKASSSHDIGETSAE 103

The following BLAST results are available for this feature:

BLAST of MELO3C028560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048423.1	6.0e-43	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK28876.1	6.0e-43	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK30083.1	2.3e-42	99.03	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032454.1	2.3e-42	99.03	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99900.1 Ty3/gyp...	[more]
TYK22240.1	2.3e-42	99.03	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C028560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C028560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DYS4	2.9e-43	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TXP9	2.9e-43	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7SMQ7	1.1e-42	99.03	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3E1V9	1.1e-42	99.03	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BU88	1.1e-42	99.03	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of MELO3C028560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028560.1	MELO3C028560.1	mRNA