MELO3C028468 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028468
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein Ycf2
Location	chr02: 7072978 .. 7073685 (-)
RNA-Seq Expression	MELO3C028468
Synteny	MELO3C028468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCAATTCAATTCATTGGGATCTTTCATTCACATTTTTTGCCATCAAGAACGTTTTATAAAACTCTTAGACTCCCGAATTTGGAGTATCCTACTTTCACGCAATTCACAGGGTTCAACAAGGAATCGATATTTCACGATCAAGGGTGTAGTACTATTTGTAGTAGCGGTCCTTATATATCGTATTAACAATCGAAAGATGGTCGAAAGAAAAAATCTCTATTTGACAGGGTTTCTTCCTATACCTATGAATTTCATTGGACCCAGAAATGATACATTGGAAGAATCTTTTGGCTCTTCCAATATCAATAGGTTGATTGTTTCGCTCCTGTATCTTCCAAAAGGAAAAAAGATCTCTGAGAGCTGTTTCCTGGATCCGAAAGAGAGTACTTGGGTTCTCCCAATAACTAAAAAGTGTATCATGCCTGAATCTGACTGGGGTTCGCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCCAGTTGTAAGATATCTAATGAAACCGTCGCTGGAATTGAGATCTCATTCAAAGAGAAAGATATCAAATATCTGGAGTTTCTTTTTGTATATTATATGGATGATCAGATCCGCAAGGACCATGATTGGGAATTGTTGGATCGTCCTTTTACGAGGAAGAGGCAAAACATAATCAACTTGAATTCGGGACAGCTATTCGAAATCTTAGTGAAAGACTGGATTTG

mRNA sequence

ATGGAACCAATTCAATTCATTGGGATCTTTCATTCACATTTTTTGCCATCAAGAACGTTTTATAAAACTCTTAGACTCCCGAATTTGGAGTATCCTACTTTCACGCAATTCACAGGGTTCAACAAGGAATCGATATTTCACGATCAAGGGTGTAGTACTATTTGTAGTAGCGGTCCTTATATATCGTATTAACAATCGAAAGATGGTCGAAAGAAAAAATCTCTATTTGACAGGGTTTCTTCCTATACCTATGAATTTCATTGGACCCAGAAATGATACATTGGAAGAATCTTTTGGCTCTTCCAATATCAATAGGTTGATTGTTTCGCTCCTGTATCTTCCAAAAGGAAAAAAGATCTCTGAGAGCTGTTTCCTGGATCCGAAAGAGAGTACTTGGGTTCTCCCAATAACTAAAAAGTGTATCATGCCTGAATCTGACTGGGGTTCGCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCCAGTTGTAAGATATCTAATGAAACCGTCGCTGGAATTGAGATCTCATTCAAAGAGAAAGATATCAAATATCTGGAGTTTCTTTTTGTATATTATATGGATGATCAGATCCGCAAGGACCATGATTGGGAATTGTTGGATCGTCCTTTTACGAGGAAGAGGCAAAACATAATCAACTTGAATTCGGGACAGCTATTCGAAATCTTAGTGAAAGACTGGATTTG

Coding sequence (CDS)

TGGAACCAATTCAATTCATTGGGATCTTTCATTCACATTTTTTGCCATCAAGAACGTTTTATAAAACTCTTAGACTCCCGAATTTGGAGTATCCTACTTTCACGCAATTCACAGGGTTCAACAAGGAATCGATATTTCACGATCAAGGGTGTAGTACTATTTGTAGTAGCGGTCCTTATATATCGTATTAACAATCGAAAGATGGTCGAAAGAAAAAATCTCTATTTGACAGGGTTTCTTCCTATACCTATGAATTTCATTGGACCCAGAAATGATACATTGGAAGAATCTTTTGGCTCTTCCAATATCAATAGGTTGATTGTTTCGCTCCTGTATCTTCCAAAAGGAAAAAAGATCTCTGAGAGCTGTTTCCTGGATCCGAAAGAGAGTACTTGGGTTCTCCCAATAACTAAAAAGTGTATCATGCCTGAATCTGACTGGGGTTCGCGGTGGTGGAGGAACTGGATCGGAAAAAAGAGGGATTCCAGTTGTAAGATATCTAATGAAACCGTCGCTGGAATTGAGATCTCATTCAAAGAGAAAGATATCAAATATCTGGAGTTTCTTTTTGTATATTATATGGATGATCAGATCCGCAAGGACCATGATTGGGAATTGTTGGATCGTCCTTTTACGAGGAAGAGGCAAAACATAATCAACTTGAATTCGGGACAGCTATTCGAAATCTTAGTGAAAGACTGGATT

Protein sequence

WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLIYRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI

Homology

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BLAST of MELO3C028468 vs. NCBI nr
Match: QRW36598.1 (hypothetical chloroplast RF21 [Cucumis melo] >QRW36618.1 hypothetical chloroplast RF21 [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 6.9e-135
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 260

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BLAST of MELO3C028468 vs. NCBI nr
Match: ASY96830.1 (Ycf2 [Cucumis melo var. momordica] >ASY97004.1 Ycf2 [Cucumis melo var. cantalupo] >ASY97352.1 Ycf2 [Cucumis melo var. flexuosus] >ASY96836.1 Ycf2 [Cucumis melo var. momordica] >ASY97010.1 Ycf2 [Cucumis melo var. cantalupo])

HSP 1 Score: 490.7 bits (1262), Expect = 6.9e-135
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 260

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BLAST of MELO3C028468 vs. NCBI nr
Match: YP_004841827.1 (hypothetical chloroplast RF21 [Cucumis melo subsp. melo] >YP_004841847.1 hypothetical chloroplast RF21 [Cucumis melo subsp. melo] >YP_009860117.1 hypothetical chloroplast RF21 [Cucumis melo subsp. agrestis] >YP_009860137.1 hypothetical chloroplast RF21 [Cucumis melo subsp. agrestis] >ASY96656.1 Ycf2 [Cucumis melo var. conomon] >ASY96743.1 Ycf2 [Cucumis melo var. makuwa] >ASY96917.1 Ycf2 [Cucumis melo var. dudaim] >ASY97178.1 Ycf2 [Cucumis melo var. inodorus] >QJF46428.1 Ycf2 [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 6.9e-135
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 260

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BLAST of MELO3C028468 vs. NCBI nr
Match: ASY96395.1 (Ycf2 [Cucumis melo subsp. agrestis] >ASY96401.1 Ycf2 [Cucumis melo subsp. agrestis])

HSP 1 Score: 489.2 bits (1258), Expect = 2.0e-134
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWEL DRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELFDRPFTRKRQNIINLNSGQLFEILVKDWI 260

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BLAST of MELO3C028468 vs. NCBI nr
Match: QIT04093.1 (Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX48604.1 hypothetical chloroplast RF21 [Luffa aegyptiaca] >QKX48623.1 hypothetical chloroplast RF21 [Luffa aegyptiaca])

HSP 1 Score: 468.8 bits (1205), Expect = 2.8e-128
Identity = 226/235 (96.17%), Postives = 229/235 (97.45%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           W QFNS+GSFIHIF HQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WTQFNSVGSFIHIFFHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPES+WGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWEL DR   RKR+NIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWI 260

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BLAST of MELO3C028468 vs. ExPASy Swiss-Prot
Match: Q2L949 (Protein Ycf2 OS=Gossypium hirsutum OX=3635 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 8.8e-125
Identity = 218/235 (92.77%), Postives = 221/235 (94.04%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           W QFNS+GSFIHIF HQERFIKLLD RIWSILLSRNSQGST NRYFTIKGVVLFVVAVLI
Sbjct: 30  WTQFNSVGSFIHIFFHQERFIKLLDPRIWSILLSRNSQGSTSNRYFTIKGVVLFVVAVLI 89

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNR MVERKNLYLTG LPIPMN IGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 90  YRINNRNMVERKNLYLTGLLPIPMNSIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 149

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPES+ GSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 150 ESCFLDPKESTWVLPITKKCIMPESNRGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 209

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDD IRKDHDWEL DR    KR+NIINLNSGQLFEILVKDWI
Sbjct: 210 KDIKYLEFLFVYYMDDSIRKDHDWELFDRLSPSKRRNIINLNSGQLFEILVKDWI 264

[Close]

BLAST of MELO3C028468 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.0e-124
Identity = 216/235 (91.91%), Postives = 219/235 (93.19%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           W QF S+GSFIHIF HQERFIKL D RIWSILLSRNSQGST NRYFTIKGVVLFVVAVLI
Sbjct: 30  WTQFTSVGSFIHIFFHQERFIKLFDPRIWSILLSRNSQGSTSNRYFTIKGVVLFVVAVLI 89

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNR MVERKNLYLTG LPIPMN IGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 90  YRINNRNMVERKNLYLTGLLPIPMNSIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 149

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPES+WGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 150 ESCFLDPKESTWVLPITKKCIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 209

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDD I KDHDWEL DR   RKR+NIINLNSGQLFEILVK WI
Sbjct: 210 KDIKYLEFLFVYYMDDPIHKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKHWI 264

[Close]

BLAST of MELO3C028468 vs. ExPASy Swiss-Prot
Match: Q49KT6 (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 3.3e-124
Identity = 216/235 (91.91%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           W QFNS+GSFIHIF HQERFIKLLD RIWSILLSRNSQGST NRYFTIKGVVLFVVAVL+
Sbjct: 30  WTQFNSVGSFIHIFFHQERFIKLLDPRIWSILLSRNSQGSTSNRYFTIKGVVLFVVAVLL 89

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNR MVERKNLYLTG LPIPMN IGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 90  YRINNRNMVERKNLYLTGLLPIPMNSIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 149

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPES+WGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 150 ESCFLDPKESTWVLPITKKCIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 209

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDD I KDHDWE LDR    KR+NIINLNS QLFEILVKDWI
Sbjct: 210 KDIKYLEFLFVYYMDDPICKDHDWEFLDRLSPSKRRNIINLNSRQLFEILVKDWI 264

[Close]

BLAST of MELO3C028468 vs. ExPASy Swiss-Prot
Match: Q09WV7 (Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 4.4e-124
Identity = 217/237 (91.56%), Postives = 222/237 (93.67%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNS--QGSTRNRYFTIKGVVLFVVAV 60
           W Q NS+ SFIHIF HQERFIKLLDSRIWSILLSRNS  QGST NRY TIKGVVLFVV+V
Sbjct: 30  WTQLNSVVSFIHIFFHQERFIKLLDSRIWSILLSRNSHLQGSTSNRYLTIKGVVLFVVSV 89

Query: 61  LIYRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKK 120
           LIYRINNRKMVERKNLYLTG LPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKK
Sbjct: 90  LIYRINNRKMVERKNLYLTGLLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKK 149

Query: 121 ISESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISF 180
           ISESCFLDPKESTWVLPITKKCIMPES+WGSRWWRNW+GKKRDSSCKISNETV GIEISF
Sbjct: 150 ISESCFLDPKESTWVLPITKKCIMPESNWGSRWWRNWLGKKRDSSCKISNETVTGIEISF 209

Query: 181 KEKDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KEKDIKYLEFLFVYYMDD IRKDHDWEL DR   RKR+NIINLNSGQLFEILVKDWI
Sbjct: 210 KEKDIKYLEFLFVYYMDDPIRKDHDWELFDRLSPRKRRNIINLNSGQLFEILVKDWI 266

[Close]

BLAST of MELO3C028468 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 4.4e-124
Identity = 217/235 (92.34%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           W QFNS+GSFIHIF HQERFIKLLDSRIWSIL SRNSQGST NRYFTIKGVVLFVV VLI
Sbjct: 30  WTQFNSVGSFIHIFFHQERFIKLLDSRIWSILFSRNSQGSTSNRYFTIKGVVLFVVVVLI 89

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTG LPIPMN IGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 90  YRINNRKMVERKNLYLTGLLPIPMNSIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 149

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ES FLDPKESTWVLPITKKCIM ES+WGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 150 ESRFLDPKESTWVLPITKKCIMSESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 209

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDD IRKDHDWEL DR   RK +NIINLNSGQLFEILVKDWI
Sbjct: 210 KDIKYLEFLFVYYMDDPIRKDHDWELFDRLSPRKGRNIINLNSGQLFEILVKDWI 264

[Close]

BLAST of MELO3C028468 vs. ExPASy TrEMBL
Match: A0A249RYX8 (Protein Ycf2 OS=Cucumis melo var. momordica OX=2034244 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.3e-135
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 260

[Close]

BLAST of MELO3C028468 vs. ExPASy TrEMBL
Match: G3ETW1 (Protein Ycf2 OS=Cucumis melo subsp. melo OX=412675 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.3e-135
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 260

[Close]

BLAST of MELO3C028468 vs. ExPASy TrEMBL
Match: A0A249RZ46 (Protein Ycf2 OS=Cucumis melo var. dudaim OX=2034236 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.3e-135
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 260

[Close]

BLAST of MELO3C028468 vs. ExPASy TrEMBL
Match: A0A1S4EU72 (Protein Ycf2 OS=Cucumis melo OX=3656 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.3e-135
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 260

[Close]

BLAST of MELO3C028468 vs. ExPASy TrEMBL
Match: A0A249RZN4 (Protein Ycf2 OS=Cucumis melo var. cantalupensis OX=3658 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.3e-135
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI
Sbjct: 26  WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 85

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS
Sbjct: 86  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 145

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE
Sbjct: 146 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 205

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI
Sbjct: 206 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 260

[Close]

BLAST of MELO3C028468 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-115
Identity = 201/235 (85.53%), Postives = 208/235 (88.51%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           W QFNS+GSFIHIF HQERF KLLD RI+SILL RNSQGST NRYFTIKGVVLFVVA L+
Sbjct: 30  WTQFNSVGSFIHIFFHQERFRKLLDPRIFSILLLRNSQGSTSNRYFTIKGVVLFVVAALL 89

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNR MVE KNLYL G LPIPMN IGPRNDT EESFGS NINRLIVSLLYL KGKKIS
Sbjct: 90  YRINNRNMVESKNLYLKGLLPIPMNSIGPRNDTSEESFGSCNINRLIVSLLYLTKGKKIS 149

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCF DPKESTWVLPIT+KCIMPES+W SRWWRNWIGKKR   CKISNETVAGI+ISFKE
Sbjct: 150 ESCFRDPKESTWVLPITQKCIMPESNWSSRWWRNWIGKKRGFCCKISNETVAGIDISFKE 209

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDD IRK HDWEL DR    KR+NIINLNSGQLFEILVKDWI
Sbjct: 210 KDIKYLEFLFVYYMDDPIRKGHDWELFDRLSPSKRRNIINLNSGQLFEILVKDWI 264

[Close]

BLAST of MELO3C028468 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-115
Identity = 201/235 (85.53%), Postives = 208/235 (88.51%), Query Frame = 0


Query: 1   WNQFNSLGSFIHIFCHQERFIKLLDSRIWSILLSRNSQGSTRNRYFTIKGVVLFVVAVLI 60
           W QFNS+GSFIHIF HQERF KLLD RI+SILL RNSQGST NRYFTIKGVVLFVVA L+
Sbjct: 30  WTQFNSVGSFIHIFFHQERFRKLLDPRIFSILLLRNSQGSTSNRYFTIKGVVLFVVAALL 89

Query: 61  YRINNRKMVERKNLYLTGFLPIPMNFIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKIS 120
           YRINNR MVE KNLYL G LPIPMN IGPRNDT EESFGS NINRLIVSLLYL KGKKIS
Sbjct: 90  YRINNRNMVESKNLYLKGLLPIPMNSIGPRNDTSEESFGSCNINRLIVSLLYLTKGKKIS 149

Query: 121 ESCFLDPKESTWVLPITKKCIMPESDWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKE 180
           ESCF DPKESTWVLPIT+KCIMPES+W SRWWRNWIGKKR   CKISNETVAGI+ISFKE
Sbjct: 150 ESCFRDPKESTWVLPITQKCIMPESNWSSRWWRNWIGKKRGFCCKISNETVAGIDISFKE 209

Query: 181 KDIKYLEFLFVYYMDDQIRKDHDWELLDRPFTRKRQNIINLNSGQLFEILVKDWI 236
           KDIKYLEFLFVYYMDD IRK HDWEL DR    KR+NIINLNSGQLFEILVKDWI
Sbjct: 210 KDIKYLEFLFVYYMDDPIRKGHDWELFDRLSPSKRRNIINLNSGQLFEILVKDWI 264

The following BLAST results are available for this feature:

BLAST of MELO3C028468 vs. NCBI nr


Match Name	E-value	Identity	Description
QRW36598.1	6.9e-135	100.00	hypothetical chloroplast RF21 [Cucumis melo] >QRW36618.1 hypothetical chloroplas...	[more]
ASY96830.1	6.9e-135	100.00	Ycf2 [Cucumis melo var. momordica] >ASY97004.1 Ycf2 [Cucumis melo var. cantalupo...	[more]
YP_004841827.1	6.9e-135	100.00	hypothetical chloroplast RF21 [Cucumis melo subsp. melo] >YP_004841847.1 hypothe...	[more]
ASY96395.1	2.0e-134	99.57	Ycf2 [Cucumis melo subsp. agrestis] >ASY96401.1 Ycf2 [Cucumis melo subsp. agrest...	[more]
QIT04093.1	2.8e-128	96.17	Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX...	[more]

BLAST of MELO3C028468 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2L949	8.8e-125	92.77	Protein Ycf2 OS=Gossypium hirsutum OX=3635 GN=ycf2-A PE=3 SV=1	[more]
Q0ZIV6	2.0e-124	91.91	Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1	[more]
Q49KT6	3.3e-124	91.91	Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1	[more]
Q09WV7	4.4e-124	91.56	Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1	[more]
Q14F97	4.4e-124	92.34	Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1	[more]

BLAST of MELO3C028468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A249RYX8	3.3e-135	100.00	Protein Ycf2 OS=Cucumis melo var. momordica OX=2034244 GN=ycf2 PE=3 SV=1	[more]
G3ETW1	3.3e-135	100.00	Protein Ycf2 OS=Cucumis melo subsp. melo OX=412675 GN=ycf2 PE=3 SV=1	[more]
A0A249RZ46	3.3e-135	100.00	Protein Ycf2 OS=Cucumis melo var. dudaim OX=2034236 GN=ycf2 PE=3 SV=1	[more]
A0A1S4EU72	3.3e-135	100.00	Protein Ycf2 OS=Cucumis melo OX=3656 GN=ycf2 PE=3 SV=1	[more]
A0A249RZN4	3.3e-135	100.00	Protein Ycf2 OS=Cucumis melo var. cantalupensis OX=3658 GN=ycf2 PE=3 SV=1	[more]

BLAST of MELO3C028468 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	2.2e-115	85.53	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	2.2e-115	85.53	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008543	Uncharacterised protein family Ycf2	PFAM	PF05695	DUF825	coord: 1..235 e-value: 4.8E-149 score: 498.0
None	No IPR available	PANTHER	PTHR33078:SF68	YCF2-LIKE PROTEIN	coord: 1..177
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 1..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028468.1	MELO3C028468.1	mRNA