MELO3C028459 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028459
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CACTA en-spm transposon protein
Location	chr01: 17145202 .. 17145575 (+)
RNA-Seq Expression	MELO3C028459
Synteny	MELO3C028459

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCTGTAGGCGACAATACGGGTGAGTCTAAGAATTTTCTTCATTTTTAACTTACAAATATTTCATGTAGGGGTTTCTAACTTTATATGTTATTGTCTATTTATTGAGCAGGGTCTTCTTCTCAACAAACGACTCCGACACCTAGGAAACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCGT

mRNA sequence

GTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCTGTAGGCGACAATACGGGGTCTTCTTCTCAACAAACGACTCCGACACCTAGGAAACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCGT

Coding sequence (CDS)

ATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCTGTAGGCGACAATACGGGGTCTTCTTCTCAACAAACGACTCCGACACCTAGGAAACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGC

Protein sequence

MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG

Homology

[Close]

BLAST of MELO3C028459 vs. NCBI nr
Match: KAA0046834.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 5.1e-41
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELER 60
           MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT SSSQQTTPTPR+RAQSRLLELER
Sbjct: 255 MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTRSSSQQTTPTPRRRAQSRLLELER 314

Query: 61  HVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           HVAINGRIPMTIAPGAEKPISPHAVRFSQAIG
Sbjct: 315 HVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 346

[Close]

BLAST of MELO3C028459 vs. NCBI nr
Match: KAA0065518.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELER 60
           MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLEL+R
Sbjct: 168 MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELKR 227

Query: 61  HVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           HVAINGRI MTIAPGAEKPISPHAVRFSQAIG
Sbjct: 228 HVAINGRILMTIAPGAEKPISPHAVRFSQAIG 259

[Close]

BLAST of MELO3C028459 vs. NCBI nr
Match: TYJ99698.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 174.1 bits (440), Expect = 5.6e-40
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELE 60
           MSYRRS+FMETDDMFLQFEEDLDNIAGGSSSVGDNT GSSSQQTTPTPR+RAQSRLLELE
Sbjct: 94  MSYRRSSFMETDDMFLQFEEDLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELE 153

Query: 61  RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG
Sbjct: 154 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 186

[Close]

BLAST of MELO3C028459 vs. NCBI nr
Match: TYJ96549.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELE 60
           MSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLELE
Sbjct: 196 MSYRRSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELE 255

Query: 61  RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           RHVAINGRIPMTIAPGAEKPISPHA RFSQAIG
Sbjct: 256 RHVAINGRIPMTIAPGAEKPISPHANRFSQAIG 288

[Close]

BLAST of MELO3C028459 vs. NCBI nr
Match: TYK11476.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELE 60
           MSYR SNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLELE
Sbjct: 145 MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELE 204

Query: 61  RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG
Sbjct: 205 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 237

[Close]

BLAST of MELO3C028459 vs. ExPASy TrEMBL
Match: A0A5A7TUT1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001310 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.4e-41
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELER 60
           MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT SSSQQTTPTPR+RAQSRLLELER
Sbjct: 255 MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTRSSSQQTTPTPRRRAQSRLLELER 314

Query: 61  HVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           HVAINGRIPMTIAPGAEKPISPHAVRFSQAIG
Sbjct: 315 HVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 346

[Close]

BLAST of MELO3C028459 vs. ExPASy TrEMBL
Match: A0A5A7VD02 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00160 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELER 60
           MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLEL+R
Sbjct: 168 MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELKR 227

Query: 61  HVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           HVAINGRI MTIAPGAEKPISPHAVRFSQAIG
Sbjct: 228 HVAINGRILMTIAPGAEKPISPHAVRFSQAIG 259

[Close]

BLAST of MELO3C028459 vs. ExPASy TrEMBL
Match: A0A5D3BNG3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00960 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.7e-40
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELE 60
           MSYRRS+FMETDDMFLQFEEDLDNIAGGSSSVGDNT GSSSQQTTPTPR+RAQSRLLELE
Sbjct: 94  MSYRRSSFMETDDMFLQFEEDLDNIAGGSSSVGDNTAGSSSQQTTPTPRRRAQSRLLELE 153

Query: 61  RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG
Sbjct: 154 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 186

[Close]

BLAST of MELO3C028459 vs. ExPASy TrEMBL
Match: A0A5D3BBZ9 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002070 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.0e-39
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELE 60
           MSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLELE
Sbjct: 196 MSYRRSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELE 255

Query: 61  RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           RHVAINGRIPMTIAPGAEKPISPHA RFSQAIG
Sbjct: 256 RHVAINGRIPMTIAPGAEKPISPHANRFSQAIG 288

[Close]

BLAST of MELO3C028459 vs. ExPASy TrEMBL
Match: A0A5D3CM32 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001360 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.0e-39
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1   MSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELE 60
           MSYR SNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLELE
Sbjct: 145 MSYRPSNFMETDDMFLQFEDDLDNNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELE 204

Query: 61  RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 93
           RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG
Sbjct: 205 RHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 237

The following BLAST results are available for this feature:

BLAST of MELO3C028459 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046834.1	5.1e-41	97.83	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0065518.1	2.5e-40	96.74	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ99698.1	5.6e-40	96.77	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYJ96549.1	2.1e-39	95.70	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
TYK11476.1	2.1e-39	95.70	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C028459 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C028459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUT1	2.4e-41	97.83	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7VD02	1.2e-40	96.74	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5D3BNG3	2.7e-40	96.77	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3BBZ9	1.0e-39	95.70	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3CM32	1.0e-39	95.70	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C028459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028459.1	MELO3C028459.1	mRNA