MELO3C028362 (gene) Melon (DHL92) v4

Overview
NameMELO3C028362
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr06: 17646635 .. 17646784 (-)
RNA-Seq ExpressionMELO3C028362
SyntenyMELO3C028362
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACGCGGCGGTTGTAGTCGAAGCTGCTGTCGTCGAATCGGAAGAGACGCGGAGGTGATACGGCGGTGGTCGTCGTCATCGTCGAAGGTTTCGTCGTCGAAGGTTTCGTCGTCGTCGAAGAGACGCGGAGGTGATACGGAGGGGAATGGC

mRNA sequence

AGACGCGGCGGTTGTAGTCGAAGCTGCTGTCGTCGAATCGGAAGAGACGCGGAGGTGATACGGCGGTGGTCGTCGTCATCGTCGAAGGTTTCGTCGTCGAAGGTTTCGTCGTCGTCGAAGAGACGCGGAGGTGATACGGAGGGGAATGGC

Coding sequence (CDS)

AGACGCGGCGGTTGTAGTCGAAGCTGCTGTCGTCGAATCGGAAGAGACGCGGAGGTGATACGGCGGTGGTCGTCGTCATCGTCGAAGGTTTCGTCGTCGAAGGTTTCGTCGTCGTCGAAGAGACGCGGAGGTGATACGGAGGGGAATGGC

Protein sequence

RRGGCSRSCCRRIGRDAEVIRRWSSSSSKVSSSKVSSSSKRRGGDTEGNG
Homology
[Close]
BLAST of MELO3C028362 vs. NCBI nr
Match: TYK04585.1 (hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.5e-10
Identity = 43/50 (86.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 1  RRGGCSRSCCRRIGRDAEVIRRWSSSSSKVSSSKVSSSSKRRGGDTEGNG 51
          RRGGCSRSCCRRI RDAEVIRRWSSSSSKV      SSSKRRGGDTEGNG
Sbjct: 17 RRGGCSRSCCRRIRRDAEVIRRWSSSSSKV------SSSKRRGGDTEGNG 60

[Close]
BLAST of MELO3C028362 vs. ExPASy TrEMBL
Match: A0A5D3BZI8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002220 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.1e-11
Identity = 43/50 (86.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 1  RRGGCSRSCCRRIGRDAEVIRRWSSSSSKVSSSKVSSSSKRRGGDTEGNG 51
          RRGGCSRSCCRRI RDAEVIRRWSSSSSKV      SSSKRRGGDTEGNG
Sbjct: 17 RRGGCSRSCCRRIRRDAEVIRRWSSSSSKV------SSSKRRGGDTEGNG 60

The following BLAST results are available for this feature:
BLAST of MELO3C028362 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK04585.11.5e-1086.00hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa][more]
BLAST of MELO3C028362 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028362 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BZI87.1e-1186.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C028362 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028362.1MELO3C028362.1mRNA