MELO3C028244 (gene) Melon (DHL92) v4

Overview
NameMELO3C028244
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr09: 10173170 .. 10173424 (+)
RNA-Seq ExpressionMELO3C028244
SyntenyMELO3C028244
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAGCTATTGCACGCATCGGCTCGATCGGCTCGGCTTGCTTGATTCGGCTCGACCCGATCGTTTGTAGTCGGCGCACACGCGACGGCTGTTTTCCCTCTGTTTCACTCGACGACGGTCGGAAGGGGGAAGCACGACGAAAATGGAAGGACAGCTTGTTCGAGTGCACGAGATGAAGAGAGAGAGAGAGAGAGCATCAGAGATGACGGAGATGAAGGGAGAGAGAGCGTCGGACCGATCTGGGAGGACCCGTCGA

mRNA sequence

TTCAGCTATTGCACGCATCGGCTCGATCGGCTCGGCCGATCGTTTGTAGTCGGCGCACACGCGACGGCTGTTTTCCCTCTGTTTCACTCGACGACGGTCGGAAGGGGGAAGCACGACGAAAATGGAAGGACAGCTTGTTCGAGTGCACGAGATGAAGAGAGAGAGAGAGAGAGCATCAGAGATGACGGAGATGAAGGGAGAGAGAGCGTCGGACCGATCTGGGAGGACCCGTCGA

Coding sequence (CDS)

TTCAGCTATTGCACGCATCGGCTCGATCGGCTCGGCCGATCGTTTGTAGTCGGCGCACACGCGACGGCTGTTTTCCCTCTGTTTCACTCGACGACGGTCGGAAGGGGGAAGCACGACGAAAATGGAAGGACAGCTTGTTCGAGTGCACGAGATGAAGAGAGAGAGAGAGAGAGCATCAGAGATGACGGAGATGAAGGGAGAGAGAGCGTCGGACCGATCTGGGAGGACCCGTCG

Protein sequence

FSYCTHRLDRLGRSFVVGAHATAVFPLFHSTTVGRGKHDENGRTACSSARDEERERESIRDDGDEGRESVGPIWEDPS
Homology
[Close]
BLAST of MELO3C028244 vs. NCBI nr
Match: TYK30727.1 (hypothetical protein E5676_scaffold343G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 1.6e-16
Identity = 49/64 (76.56%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 15  FVVGAHATAVFPLFHSTTVGRGKHDENGRTACSSARDEERERESIRDDGDEGRESVGPIW 74
           F  GAHAT +FPLFHSTTVGR KH  NGRT CSSARDE  ERES+ D GDE RESV PIW
Sbjct: 51  FRAGAHATTIFPLFHSTTVGREKHGRNGRTTCSSARDE--ERESVGDGGDEERESVRPIW 110

Query: 75  EDPS 79
           EDPS
Sbjct: 111 EDPS 112

[Close]
BLAST of MELO3C028244 vs. ExPASy TrEMBL
Match: A0A5D3E3S7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00590 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.9e-17
Identity = 49/64 (76.56%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 15  FVVGAHATAVFPLFHSTTVGRGKHDENGRTACSSARDEERERESIRDDGDEGRESVGPIW 74
           F  GAHAT +FPLFHSTTVGR KH  NGRT CSSARDE  ERES+ D GDE RESV PIW
Sbjct: 51  FRAGAHATTIFPLFHSTTVGREKHGRNGRTTCSSARDE--ERESVGDGGDEERESVRPIW 110

Query: 75  EDPS 79
           EDPS
Sbjct: 111 EDPS 112

The following BLAST results are available for this feature:
BLAST of MELO3C028244 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK30727.11.6e-1676.56hypothetical protein E5676_scaffold343G00590 [Cucumis melo var. makuwa][more]
BLAST of MELO3C028244 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C028244 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E3S77.9e-1776.56Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO3C028244 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028244.1MELO3C028244.1mRNA