MELO3C028065 (gene) Melon (DHL92) v4

Overview


Name	MELO3C028065
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 24274377 .. 24274714 (-)
RNA-Seq Expression	MELO3C028065
Synteny	MELO3C028065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGGCTCACTCGGCTCGGCTCACCCGGCTCACTCGGCTCACTCGGCTCCAGCCCGCGGCTTGCTCGAATCGGATCCGTGGCTCGGGTCTGGTTTTTTAGCTCCACCCGACAACGCTCGAGTGAGAGACGTCGACGGCGGACGTGGGTGGCTCTCCTCGGCGTTGAGGGCTGCGTCGGGAACACAGACTGAAGTGGAGCCGTCGACGGTGACAGAGACGGAGGAAGAGGGAGAGCTATCGGCTGCCGGCGATTGGAAGCGAATCGGAAATGGATGGGGAGCCGCGGCGAACGAACACGATGAAGCTGACGACGCTGGAGGCGGAAAGGAGACGGAAAA

mRNA sequence

CTCGGCTCACTCGGCTCGGCTCACCCGGCTTGCTCGAATCGGATCCGTGGCTCGGGTCTGGTTTTTTAGCTCCACCCGACAACGCTCGAGTGAGAGACGTCGACGGCGGACGTGGGTGGCTCTCCTCGGCGTTGAGGGCTGCGTCGGGAACACAGACTGAAGTGGAGCCGTCGACGGTGACAGAGACGGAGGAAGAGGGAGAGCTATCGGCTGCCGGCGATTGGAAGCGAATCGGAAATGGATGGGGAGCCGCGGCGAACGAACACGATGAAGCTGACGACGCTGGAGGCGGAAAGGAGACGGAAAA

Coding sequence (CDS)

CGGCTCACTCGGCTCGGCTCACCCGGCTTGCTCGAATCGGATCCGTGGCTCGGGTCTGGTTTTTTAGCTCCACCCGACAACGCTCGAGTGAGAGACGTCGACGGCGGACGTGGGTGGCTCTCCTCGGCGTTGAGGGCTGCGTCGGGAACACAGACTGAAGTGGAGCCGTCGACGGTGACAGAGACGGAGGAAGAGGGAGAGCTATCGGCTGCCGGCGATTGGAAGCGAATCGGAAATGGATGGGGAGCCGCGGCGAACGAACACGATGAAGCTGACGACGCTGGAGGCGGAAAGGAGACGGAA

Protein sequence

RLTRLGSPGLLESDPWLGSGFLAPPDNARVRDVDGGRGWLSSALRAASGTQTEVEPSTVTETEEEGELSAAGDWKRIGNGWGAAANEHDEADDAGGGKETE

Homology

[Close]

BLAST of MELO3C028065 vs. NCBI nr
Match: ADN33848.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 156.4 bits (394), Expect = 1.3e-34
Identity = 86/111 (77.48%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 1   RLTRLGSPGLLE---------SDPWLGSGFL-APPDNARVRDVDGGRGWLSSALRAASGT 60
           RLTRLGSPG            S+   GS  + APPDNARVRDVDGGRGWLSSA RAASGT
Sbjct: 94  RLTRLGSPGSARLTRLQPAAYSNRIRGSDLVFAPPDNARVRDVDGGRGWLSSAFRAASGT 153

Query: 61  QTEVEPSTVTETEEEGELSAAGDWKRIGNGWGAAANEHDEADDAGGGKETE 102
           QTEV PSTVTETEEEGELSAAG WKRIGNGWGAAA+EHDEADDAGGG+ETE
Sbjct: 154 QTEVGPSTVTETEEEGELSAAGGWKRIGNGWGAAADEHDEADDAGGGRETE 204

[Close]

BLAST of MELO3C028065 vs. ExPASy TrEMBL
Match: E5GBK6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.4e-35
Identity = 86/111 (77.48%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 1   RLTRLGSPGLLE---------SDPWLGSGFL-APPDNARVRDVDGGRGWLSSALRAASGT 60
           RLTRLGSPG            S+   GS  + APPDNARVRDVDGGRGWLSSA RAASGT
Sbjct: 94  RLTRLGSPGSARLTRLQPAAYSNRIRGSDLVFAPPDNARVRDVDGGRGWLSSAFRAASGT 153

Query: 61  QTEVEPSTVTETEEEGELSAAGDWKRIGNGWGAAANEHDEADDAGGGKETE 102
           QTEV PSTVTETEEEGELSAAG WKRIGNGWGAAA+EHDEADDAGGG+ETE
Sbjct: 154 QTEVGPSTVTETEEEGELSAAGGWKRIGNGWGAAADEHDEADDAGGGRETE 204

The following BLAST results are available for this feature:

BLAST of MELO3C028065 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33848.1	1.3e-34	77.48	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C028065 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C028065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBK6	6.4e-35	77.48	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of MELO3C028065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C028065.1	MELO3C028065.1	mRNA