MELO3C027945.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C027945.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionULP_PROTEASE domain-containing protein
Locationchr04: 23296786 .. 23297100 (-)
RNA-Seq ExpressionMELO3C027945.jh1
SyntenyMELO3C027945.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCATATGATGATGTGGTGTACCATACTGACTCGTTGAGGATAAGCTCTCGAGATGATATTAAATACGTAACGAATATGTAAGCTAACTATGTTTATGTTTCCTTTTCTTTTAATCGGTAAAAAAATTAGTTCATTTTGATTTATACTATACTTTGGGAAATGTAGGGCCTTGACGATTTTCCAATATCAAAAGAATTTGAAAAAGACCAGAAAAACAACATTCTGGAAAGCGGTAAAGGTAAATATACACTACAAGAAATCTGGCCTTTAATGTCACTTGGCGACCGACATCTTTCCGAGCGTTATTAA

mRNA sequence

ATGAATCCATATGATGATGTGGTGTACCATACTGACTCGTTGAGGATAAGCTCTCGAGATGATATTAAATACGGCCTTGACGATTTTCCAATATCAAAAGAATTTGAAAAAGACCAGAAAAACAACATTCTGGAAAGCGGTAAAGGTAAATATACACTACAAGAAATCTGGCCTTTAATGTCACTTGGCGACCGACATCTTTCCGAGCGTTATTAA

Coding sequence (CDS)

ATGAATCCATATGATGATGTGGTGTACCATACTGACTCGTTGAGGATAAGCTCTCGAGATGATATTAAATACGGCCTTGACGATTTTCCAATATCAAAAGAATTTGAAAAAGACCAGAAAAACAACATTCTGGAAAGCGGTAAAGGTAAATATACACTACAAGAAATCTGGCCTTTAATGTCACTTGGCGACCGACATCTTTCCGAGCGTTATTAA

Protein sequence

MNPYDDVVYHTDSLRISSRDDIKYGLDDFPISKEFEKDQKNNILESGKGKYTLQEIWPLMSLGDRHLSERY
Homology
[Close]
BLAST of MELO3C027945.jh1 vs. NCBI nr
Match: KAA0040673.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 2.54e-20
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 0 

Query: 1   MNPYDDVVYHTDSLRISSRDDIKYGLDDFPISKEFEKDQKNNILESGKG 49
           +NPYDDVVYH DSLR SSRDDIKYGLDDFPI +EFEKDQKNNILESGKG
Sbjct: 467 INPYDDVVYHLDSLRTSSRDDIKYGLDDFPILEEFEKDQKNNILESGKG 515

[Close]
BLAST of MELO3C027945.jh1 vs. NCBI nr
Match: KAA0058935.1 (uncharacterized protein E6C27_scaffold98G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 2.29e-08
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 1  MNPYDDVVYHTDSLRISSRDDIKYGLDDFPISKEFEKDQKNNILESGK 48
          +NPYDDVVYH DSLR SSRDDIKYGL  F   K  +K +K    ++ K
Sbjct: 24 INPYDDVVYHLDSLRTSSRDDIKYGLTIFQSQKNLKKTRKTTFWKAVK 71

[Close]
BLAST of MELO3C027945.jh1 vs. NCBI nr
Match: TYK23697.1 (uncharacterized protein E5676_scaffold1607G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 57.0 bits (136), Expect = 4.38e-08
Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 1  MNPYDDVVYHTDSLRISSRDDIKYGLDDFPISKEFEKDQK 40
          +NPYDDVVYH DSLR SSRDDIKYGL  F   K  +K +K
Sbjct: 24 INPYDDVVYHLDSLRTSSRDDIKYGLTIFQSQKNLKKTRK 63

[Close]
BLAST of MELO3C027945.jh1 vs. NCBI nr
Match: KAA0049917.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 3.25e-06
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 6   DVVYHTDSLRISSRDDIKY---GLDDFPISKEFEKDQKNNILESGKG 49
           +V+    +L I  +  ++Y   GLDDFPIS+EFEKDQKNNILESGKG
Sbjct: 426 EVISEPSNLPIQLKYILRYAERGLDDFPISEEFEKDQKNNILESGKG 472

[Close]
BLAST of MELO3C027945.jh1 vs. NCBI nr
Match: KAA0042505.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 53.1 bits (126), Expect = 6.20e-06
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 25  GLDDFPISKEFEKDQKNNILESGKG 49
           GLDDFPIS+EFEKDQKNNILESGKG
Sbjct: 896 GLDDFPISEEFEKDQKNNILESGKG 920

[Close]
BLAST of MELO3C027945.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TC55 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold540G00090 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.23e-20
Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 0 

Query: 1   MNPYDDVVYHTDSLRISSRDDIKYGLDDFPISKEFEKDQKNNILESGKG 49
           +NPYDDVVYH DSLR SSRDDIKYGLDDFPI +EFEKDQKNNILESGKG
Sbjct: 467 INPYDDVVYHLDSLRTSSRDDIKYGLDDFPILEEFEKDQKNNILESGKG 515

[Close]
BLAST of MELO3C027945.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UZC5 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001110 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.11e-08
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0 

Query: 1  MNPYDDVVYHTDSLRISSRDDIKYGLDDFPISKEFEKDQKNNILESGK 48
          +NPYDDVVYH DSLR SSRDDIKYGL  F   K  +K +K    ++ K
Sbjct: 24 INPYDDVVYHLDSLRTSSRDDIKYGLTIFQSQKNLKKTRKTTFWKAVK 71

[Close]
BLAST of MELO3C027945.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DJF2 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00010 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.12e-08
Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 1  MNPYDDVVYHTDSLRISSRDDIKYGLDDFPISKEFEKDQK 40
          +NPYDDVVYH DSLR SSRDDIKYGL  F   K  +K +K
Sbjct: 24 INPYDDVVYHLDSLRTSSRDDIKYGLTIFQSQKNLKKTRK 63

[Close]
BLAST of MELO3C027945.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U6E7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00760 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.57e-06
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 6   DVVYHTDSLRISSRDDIKY---GLDDFPISKEFEKDQKNNILESGKG 49
           +V+    +L I  +  ++Y   GLDDFPIS+EFEKDQKNNILESGKG
Sbjct: 426 EVISEPSNLPIQLKYILRYAERGLDDFPISEEFEKDQKNNILESGKG 472

[Close]
BLAST of MELO3C027945.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TM46 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00590 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.00e-06
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 25  GLDDFPISKEFEKDQKNNILESGKG 49
           GLDDFPIS+EFEKDQKNNILESGKG
Sbjct: 896 GLDDFPISEEFEKDQKNNILESGKG 920

The following BLAST results are available for this feature:
BLAST of MELO3C027945.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0040673.12.54e-2089.80putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
KAA0058935.12.29e-0858.33uncharacterized protein E6C27_scaffold98G001110 [Cucumis melo var. makuwa][more]
TYK23697.14.38e-0867.50uncharacterized protein E5676_scaffold1607G00010 [Cucumis melo var. makuwa][more]
KAA0049917.13.25e-0659.57transposase [Cucumis melo var. makuwa][more]
KAA0042505.16.20e-0696.00transposase [Cucumis melo var. makuwa][more]
BLAST of MELO3C027945.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C027945.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TC551.23e-2089.80Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7UZC51.11e-0858.33ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5D3DJF22.12e-0867.50ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7U6E71.57e-0659.57Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G00760 PE=... [more]
A0A5A7TM463.00e-0696.00Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00590 PE... [more]
BLAST of MELO3C027945.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027945.jh1.t1MELO3C027945.jh1.t1mRNA