MELO3C027875 (gene) Melon (DHL92) v4

Overview
NameMELO3C027875
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionBnaC09g29090D protein
Locationchr03: 718284 .. 718435 (+)
RNA-Seq ExpressionMELO3C027875
SyntenyMELO3C027875
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCGCTACGTGGAGATGGCATAGCCTTAAAGTGAAGGGTCAGGTTCAAATGAAGAAAGGCTGGCGGTGGATACCTATGCACCTAGAGACGAGGAAGGGCATAGTTAGCGACGAAATGCTTCGGAGAGTTGCAAATAAGCGTAGATCAGGAG

mRNA sequence

CATCGCTACGTGGAGATGGCATAGCCTTAAAGTGAAGGGTCAGGTTCAAATGAAGAAAGGCTGGCGGTGGATACCTATGCACCTAGAGACGAGGAAGGGCATAGTTAGCGACGAAATGCTTCGGAGAGTTGCAAATAAGCGTAGATCAGGAG

Coding sequence (CDS)

ATGAAGAAAGGCTGGCGGTGGATACCTATGCACCTAGAGACGAGGAAGGGCATAGTTAGCGACGAAATGCTTCGGAGAGTTGCAAATAAGCGTAGATCAGGA

Protein sequence

MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG
Homology
BLAST of MELO3C027875 vs. NCBI nr
Match: KAA0033831.1 (hypothetical protein E6C27_scaffold1620G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 2.2e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0

Query: 1   MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
           MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG
Sbjct: 106 MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 139

BLAST of MELO3C027875 vs. NCBI nr
Match: TYJ12141.1 (hypothetical protein E1A91_A11G328500v1, partial [Gossypium mustelinum])

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-05
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
          M+KG RWIP H ETRKG+VSDEMLR V NKRRSG
Sbjct: 50 MRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSG 83

BLAST of MELO3C027875 vs. NCBI nr
Match: KJB27998.1 (hypothetical protein B456_005G020800, partial [Gossypium raimondii])

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-05
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
          ++KG RWIP H ETRKG+VSDEMLR V NKRRSG
Sbjct: 24 LRKGLRWIPSHPETRKGVVSDEMLREVENKRRSG 57

BLAST of MELO3C027875 vs. NCBI nr
Match: TKY66948.1 (hypothetical protein E2542_SST09839 [Spatholobus suberectus])

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-05
Identity = 28/33 (84.85%), Postives = 28/33 (84.85%), Query Frame = 0

Query: 2  KKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
          KKG  WIP HLETRKGIVSDEMLR V NKRRSG
Sbjct: 41 KKGLWWIPRHLETRKGIVSDEMLRGVENKRRSG 73

BLAST of MELO3C027875 vs. NCBI nr
Match: KAG7528872.1 (hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica] >KAG7528886.1 hypothetical protein ISN44_Un153g000180 [Arabidopsis suecica] >KAG7529053.1 hypothetical protein ISN45_Un101g000060 [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7529068.1 hypothetical protein ISN45_Un101g000220 [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 56.2 bits (134), Expect = 6.3e-05
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0

Query: 2   KKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
           +KG RWIP H ETRKG+VSDEMLR V NKRRSG
Sbjct: 206 RKGLRWIPRHPETRKGVVSDEMLRGVENKRRSG 238

BLAST of MELO3C027875 vs. ExPASy TrEMBL
Match: A0A5A7SWJ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1620G00010 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0

Query: 1   MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
           MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG
Sbjct: 106 MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 139

BLAST of MELO3C027875 vs. ExPASy TrEMBL
Match: A0A5D2XH31 (Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A11G328500v1 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.0e-06
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
          M+KG RWIP H ETRKG+VSDEMLR V NKRRSG
Sbjct: 50 MRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSG 83

BLAST of MELO3C027875 vs. ExPASy TrEMBL
Match: A0A0D2PLQ2 (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_005G020800 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-05
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0

Query: 1  MKKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
          ++KG RWIP H ETRKG+VSDEMLR V NKRRSG
Sbjct: 24 LRKGLRWIPSHPETRKGVVSDEMLREVENKRRSG 57

BLAST of MELO3C027875 vs. ExPASy TrEMBL
Match: A0A3P6D0R3 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC103T45419Z PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-05
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0

Query: 2  KKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
          +KG RWIP H ETRKG+VSDEMLR V NKRRSG
Sbjct: 27 RKGLRWIPRHPETRKGVVSDEMLRGVENKRRSG 59

BLAST of MELO3C027875 vs. ExPASy TrEMBL
Match: A0A7G2FKR6 (Uncharacterized protein ycf68 OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23352 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.0e-05
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0

Query: 2   KKGWRWIPMHLETRKGIVSDEMLRRVANKRRSG 35
           +KG RWIP H ETRKG+VSDEMLR V NKRRSG
Sbjct: 215 RKGLRWIPRHPETRKGVVSDEMLRGVENKRRSG 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033831.12.2e-10100.00hypothetical protein E6C27_scaffold1620G00010 [Cucumis melo var. makuwa][more]
TYJ12141.11.7e-0579.41hypothetical protein E1A91_A11G328500v1, partial [Gossypium mustelinum][more]
KJB27998.12.2e-0576.47hypothetical protein B456_005G020800, partial [Gossypium raimondii][more]
TKY66948.12.8e-0584.85hypothetical protein E2542_SST09839 [Spatholobus suberectus][more]
KAG7528872.16.3e-0578.79hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica] >KAG7528886.1 hypo... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SWJ31.1e-10100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D2XH318.0e-0679.41Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A11... [more]
A0A0D2PLQ21.0e-0576.47Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_005G0... [more]
A0A3P6D0R33.0e-0578.79Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC103T45419Z PE=4 S... [more]
A0A7G2FKR63.0e-0578.79Uncharacterized protein ycf68 OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS233... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027875.1MELO3C027875.1mRNA