MELO3C027867.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C027867.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr12: 24832579 .. 24833082 (-)
RNA-Seq ExpressionMELO3C027867.jh1
SyntenyMELO3C027867.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCAAAATACAACCATCAACGATTTTGTTCGTCATACTTGCAATCGAACTCATGAACTCAAAAACTTGTGTCTCTCACAAATAAGCTCCGAACCTCGGAATGATTTGAAGTCAAATTTGACAGGTCTTCTAATGATATTTGTGAATCATAGCATCAGTGATTTCAAGAATGACATTTCGTTCCTTGAAAAAGAGATAAACTCGAACAAGATTAGTCGTGACACAAAAGATATGTTGGAGGATTGCTTACAAAACTTTCAAATAGGATCGGTGAATCTACGAGAAACAATGGAGATACTACAAACAAAAACAGGCTATGATGCAGAACAATTGCCAGTCACCAACGTTGTTAACCTTGCAGTAGAGTGTTTTGATGATTTTGAAGGAACTCCTATCCCTCCCGAGTGGCAATCTCGTTACAATGCCTCTTTTGCATTATTAAATCTTTCGTTGTCAATGATAAATCTTATTACTTGTAATCGAGACTATGCTTGTATCCCATAA

mRNA sequence

GATCAAAATACAACCATCAACGATTTTGTTCGTCATACTTGCAATCGAACTCATGAACTCAAAAACTTGTGTCTCTCACAAATAAGCTCCGAACCTCGGAATGATTTGAAGTCAAATTTGACAGGTCTTCTAATGATATTTGTGAATCATAGCATCAGTGATTTCAAGAATGACATTTCGTTCCTTGAAAAAGAGATAAACTCGAACAAGATTAGTCGTGACACAAAAGATATGTTGGAGGATTGCTTACAAAACTTTCAAATAGGATCGGTGAATCTACGAGAAACAATGGAGATACTACAAACAAAAACAGGCTATGATGCAGAACAATTGCCAGTCACCAACGTTGTTAACCTTGCAGTAGAGTGTTTTGATGATTTTGAAGGAACTCCTATCCCTCCCGAGTGGCAATCTCGTTACAATGCCTCTTTTGCATTATTAAATCTTTCGTTGTCAATGATAAATCTTATTACTTGTAATCGAGACTATGCTTGTATCCCATAA

Coding sequence (CDS)

ATGATATTTGTGAATCATAGCATCAGTGATTTCAAGAATGACATTTCGTTCCTTGAAAAAGAGATAAACTCGAACAAGATTAGTCGTGACACAAAAGATATGTTGGAGGATTGCTTACAAAACTTTCAAATAGGATCGGTGAATCTACGAGAAACAATGGAGATACTACAAACAAAAACAGGCTATGATGCAGAACAATTGCCAGTCACCAACGTTGTTAACCTTGCAGTAGAGTGTTTTGATGATTTTGAAGGAACTCCTATCCCTCCCGAGTGGCAATCTCGTTACAATGCCTCTTTTGCATTATTAAATCTTTCGTTGTCAATGATAAATCTTATTACTTGTAATCGAGACTATGCTTGTATCCCATAA

Protein sequence

MIFVNHSISDFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKTGYDAEQLPVTNVVNLAVECFDDFEGTPIPPEWQSRYNASFALLNLSLSMINLITCNRDYACIP
Homology
BLAST of MELO3C027867.jh1 vs. NCBI nr
Match: KAA0055284.1 (putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative invertase inhibitor [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (598), Expect = 1.31e-76
Identity = 115/123 (93.50%), Postives = 119/123 (96.75%), Query Frame = 0

Query: 1   MIFVNHSISDFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT 60
           MIFVN SIS+FKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT
Sbjct: 67  MIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT 126

Query: 61  GYDAEQLPVTNVVNLAVECFDDFEGTPIPPEWQSRYNASFALLNLSLSMINLITCNRDYA 120
           GYDAEQLPV NV NLAVECFDDFEGTP+PPEWQSRYNASFALL LS++MINLITCNRDYA
Sbjct: 127 GYDAEQLPVGNVGNLAVECFDDFEGTPVPPEWQSRYNASFALLKLSMAMINLITCNRDYA 186

Query: 121 CIP 123
           CIP
Sbjct: 187 CIP 189

BLAST of MELO3C027867.jh1 vs. NCBI nr
Match: KAG6572152.1 (Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139 bits (350), Expect = 1.68e-37
Identity = 64/123 (52.03%), Postives = 89/123 (72.36%), Query Frame = 0

Query: 1   MIFVNHSISDFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT 60
           +IFVNH+IS+FK+++ FL++EI S K++  TK+M + CL+NF+ G+ +L+++M +L T+T
Sbjct: 193 IIFVNHTISNFKDNVMFLQREIKSGKLNGKTKEMYDTCLENFERGTTDLQQSMHVLLTET 252

Query: 61  GYDAEQLPVTNVVNLAVECFDDFEGTPIPPEWQSRYNASFALLNLSLSMINLITCNRDYA 120
           G D   LP  +V +   EC DDFEG P PPEWQSRYN S  LL L L   NL+ CNR+ A
Sbjct: 253 GKDIYGLPALSVASYVTECVDDFEGVPKPPEWQSRYNTSNKLLELILGTCNLMKCNRELA 312

Query: 121 CIP 123
           CIP
Sbjct: 313 CIP 315

BLAST of MELO3C027867.jh1 vs. NCBI nr
Match: KAG6572151.1 (putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135 bits (341), Expect = 8.21e-35
Identity = 66/123 (53.66%), Postives = 87/123 (70.73%), Query Frame = 0

Query: 1   MIFVNHSISDFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT 60
           +IFVNHS S+F ++I+FL++EI S K++ +TK M   CL++F+ G+ +L+ETM IL T+T
Sbjct: 377 IIFVNHSFSNFNDNIAFLQREIKSGKLNGETKVMYNGCLEDFERGNGDLQETMHILLTQT 436

Query: 61  GYDAEQLPVTNVVNLAVECFDDFEGTPIPPEWQSRYNASFALLNLSLSMINLITCNRDYA 120
           G DA  LP  N+ N   EC D +EG PIPPEWQSRYN S+ LL L     NL+ CN D A
Sbjct: 437 GIDAYNLPTINIPNYVSECVDFYEGDPIPPEWQSRYNTSWNLLTLIGVTSNLMKCNHDIA 496

Query: 121 CIP 123
           CIP
Sbjct: 497 CIP 499

BLAST of MELO3C027867.jh1 vs. NCBI nr
Match: XP_023511468.1 (uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120 bits (301), Expect = 1.03e-31
Identity = 58/122 (47.54%), Postives = 82/122 (67.21%), Query Frame = 0

Query: 2   IFVNHSISDFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKTG 61
           IFVNH+I++F +++ FL++EI S K+  +TK M + C ++F +G   L+E+M IL T+ G
Sbjct: 51  IFVNHTINNFNDNLIFLQREIKSGKLDAETKLMYDKCSESFGMGYTKLQESMHILLTQPG 110

Query: 62  YDAEQLPVTNVVNLAVECFDDFEGTPIPPEWQSRYNASFALLNLSLSMINLITCNRDYAC 121
            +   LP  +V      CFDDFE  PIPPEWQSRY  S+ L++L L   NLI CNR+ +C
Sbjct: 111 TNVYDLPTMSVDKRISVCFDDFEDDPIPPEWQSRYKTSWNLVSLILGTSNLIKCNREASC 170

Query: 122 IP 123
           IP
Sbjct: 171 IP 172

BLAST of MELO3C027867.jh1 vs. NCBI nr
Match: KAG6572377.1 (hypothetical protein SDJN03_29105, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118 bits (296), Expect = 1.16e-30
Identity = 58/122 (47.54%), Postives = 82/122 (67.21%), Query Frame = 0

Query: 2   IFVNHSISDFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKTG 61
           IFVN +I++F +++ FL+KEI S K+  +TK M   C ++F +G  +L+E+M IL T+ G
Sbjct: 76  IFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGMGYTDLQESMHILLTQPG 135

Query: 62  YDAEQLPVTNVVNLAVECFDDFEGTPIPPEWQSRYNASFALLNLSLSMINLITCNRDYAC 121
            +   LP+ +V      CFDDFE  PIPPEW SRYN S+ L++L L   NLI CNR+ +C
Sbjct: 136 TNVYDLPIMSVDKHVGVCFDDFEDDPIPPEWTSRYNRSWNLVSLILGTSNLIKCNREASC 195

Query: 122 IP 123
           IP
Sbjct: 196 IP 197

BLAST of MELO3C027867.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 6.36e-77
Identity = 115/123 (93.50%), Postives = 119/123 (96.75%), Query Frame = 0

Query: 1   MIFVNHSISDFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT 60
           MIFVN SIS+FKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT
Sbjct: 67  MIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKT 126

Query: 61  GYDAEQLPVTNVVNLAVECFDDFEGTPIPPEWQSRYNASFALLNLSLSMINLITCNRDYA 120
           GYDAEQLPV NV NLAVECFDDFEGTP+PPEWQSRYNASFALL LS++MINLITCNRDYA
Sbjct: 127 GYDAEQLPVGNVGNLAVECFDDFEGTPVPPEWQSRYNASFALLKLSMAMINLITCNRDYA 186

Query: 121 CIP 123
           CIP
Sbjct: 187 CIP 189

BLAST of MELO3C027867.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.65e-13
Identity = 40/122 (32.79%), Postives = 66/122 (54.10%), Query Frame = 0

Query: 2   IFVNHSISDFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQIGSVNLRETMEILQTKTG 61
           IF+NHSI +  ++  +L +++  + + +D +     C++ ++ G   L+ ++E L  K  
Sbjct: 51  IFINHSIDNATDNHLYLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSLEAL-LKND 110

Query: 62  YDAEQLPVTNVVNLAVECFDDFEGTPIPPEWQSRYNASFALLNLSLSMINLITCNRDYAC 121
            D   L +++  +  V C DDFE TP PP W + Y     LL LS+   NLI C +  AC
Sbjct: 111 KDDLGLILSDAFDKIVACEDDFESTPEPPSWLAHYLPLRKLLALSMGTANLIQCKKVAAC 170

Query: 122 IP 123
           IP
Sbjct: 171 IP 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0055284.11.31e-7693.50putative invertase inhibitor [Cucumis melo var. makuwa] >TYJ99207.1 putative inv... [more]
KAG6572152.11.68e-3752.03Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6572151.18.21e-3553.66putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrospe... [more]
XP_023511468.11.03e-3147.54uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo][more]
KAG6572377.11.16e-3047.54hypothetical protein SDJN03_29105, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BJB56.36e-7793.50Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A6J1C7W55.65e-1332.79uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40Invertase/pectin methylesterase inhibitor family proteincoord: 1..114
e-value: 1.2E-7
score: 33.8
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 2..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027867.jh1.t1MELO3C027867.jh1.t1mRNA