MELO3C027837 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027837
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	polyphenol oxidase I, chloroplastic-like
Location	chr12: 21694530 .. 21694894 (+)
RNA-Seq Expression	MELO3C027837
Synteny	MELO3C027837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTTATTTCTTTGAGAGAATCTTATGTCATTTGCTTGAGAAGCCTGATTTCGCCATACCTTTTTGGAATTGGGATGCACCACCGGGGATGTGCATGCCTAAGATATACACCAAACCAAGTTCATCACTCTATGATGAGAACCGTGATGAATGTCACCAACCACCCAAATTGCTTAACCTCAACTACGGTGGAAAGAAAGTCAAAGATTCTGAGATCGTAGATTTCAATCTTCGTTGGATGAATGATCAGATGAGTGTGGAGACTGCTAGGGAGTTCCTTGGAAAAGTCATCAAACGTGGGAATTGTCCTGAAAATGGCTCGGGTAGCATTGAAACGTCTCCCCATAATAACCTTCACAATTGG

mRNA sequence

ATCTTTATTTCTTTGAGAGAATCTTATGTCATTTGCTTGAGAAGCCTGATTTCGCCATACCTTTTTGGAATTGGGATGCACCACCGGGGATGTGCATGCCTAAGATATACACCAAACCAAGTTCATCACTCTATGATGAGAACCGTGATGAATGTCACCAACCACCCAAATTGCTTAACCTCAACTACGGTGGAAAGAAAGTCAAAGATTCTGAGATCGTAGATTTCAATCTTCGTTGGATGAATGATCAGATGAGTGTGGAGACTGCTAGGGAGTTCCTTGGAAAAGTCATCAAACGTGGGAATTGTCCTGAAAATGGCTCGGGTAGCATTGAAACGTCTCCCCATAATAACCTTCACAATTGG

Coding sequence (CDS)

ATGTGCATGCCTAAGATATACACCAAACCAAGTTCATCACTCTATGATGAGAACCGTGATGAATGTCACCAACCACCCAAATTGCTTAACCTCAACTACGGTGGAAAGAAAGTCAAAGATTCTGAGATCGTAGATTTCAATCTTCGTTGGATGAATGATCAGATGAGTGTGGAGACTGCTAGGGAGTTCCTTGGAAAAGTCATCAAACGTGGGAATTGTCCTGAAAATGGCTCGGGTAGCATTGAAACGTCTCCCCATAATAACCTTCACAATTGG

Protein sequence

MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETAREFLGKVIKRGNCPENGSGSIETSPHNNLHNW

Homology

[Close]

BLAST of MELO3C027837 vs. ExPASy Swiss-Prot
Match: Q9ZP19 (Polyphenol oxidase I, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 7.1e-14
Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGG--KKVKDSEIVDFNLRWMNDQM--S 60
           M +P      +SSLYD NR++ H PP +++L Y G    V D + +  NL  M  QM  +
Sbjct: 151 MVLPDFLNDSTSSLYDSNRNQSHLPPVVVDLGYNGADTDVTDQQRITDNLALMYKQMVTN 210

Query: 61  VETAREFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
             TA  FLGK  + G+ P  G+GSIETSPH  +H W
Sbjct: 211 AGTAELFLGKAYRAGDAPSPGAGSIETSPHIPIHRW 246

[Close]

BLAST of MELO3C027837 vs. ExPASy Swiss-Prot
Match: Q06215 (Polyphenol oxidase A1, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.7e-12
Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYG--GKKVKDSEIVDFNLRWMNDQM--S 60
           M +P IY   +S LYDE R+  HQPP L++LN+   G  +  +E++  NL  M  Q+  +
Sbjct: 244 MQLPTIYADKASPLYDELRNASHQPPTLIDLNFCDIGSDIDRNELIKTNLSIMYRQVYSN 303

Query: 61  VETAREFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
            +T+R FLG   + G+    G+GSIE  PH  +H W
Sbjct: 304 GKTSRLFLGNPYRAGDAEPQGAGSIENVPHAPVHTW 339

[Close]

BLAST of MELO3C027837 vs. ExPASy Swiss-Prot
Match: P43309 (Polyphenol oxidase, chloroplastic OS=Malus domestica OX=3750 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-11
Identity = 38/96 (39.58%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKK--VKDSEIVDFNLRWMNDQM--S 60
           M +P IY  P S LYD+ R   HQPP L++L+Y G +  V     ++ NL+ M  QM  +
Sbjct: 238 MPLPAIYADPKSPLYDKLRSANHQPPTLVDLDYNGTEDNVSKETTINANLKIMYRQMVSN 297

Query: 61  VETAREFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
            + A+ F G   + G+ P+ G GSIE +PH  +H W
Sbjct: 298 SKNAKLFFGNPYRAGDEPDPGGGSIEGTPHAPVHLW 333

[Close]

BLAST of MELO3C027837 vs. ExPASy Swiss-Prot
Match: P43311 (Polyphenol oxidase, chloroplastic OS=Vitis vinifera OX=29760 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-11
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKK--VKDSEIVDFNLRWMNDQM--S 60
           M MP IY    SSLYDE R+  H PP +++L+Y G +  + D E+   NL  M  Q+   
Sbjct: 253 MYMPTIYASSPSSLYDEKRNAKHLPPTVIDLDYDGTEPTIPDDELKTDNLAIMYKQIVSG 312

Query: 61  VETAREFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
             T + FLG   + G+  + G+G++E +PHN +H W
Sbjct: 313 ATTPKLFLGYPYRAGDAIDPGAGTLEHAPHNIVHKW 348

[Close]

BLAST of MELO3C027837 vs. ExPASy Swiss-Prot
Match: O81103 (Polyphenol oxidase latent form, chloroplastic OS=Prunus armeniaca OX=36596 GN=PPO PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-11
Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 3   MPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGK--KVKDSEIVDFNLRWMNDQM--SVE 62
           +P IYT  SS LYD+ R+  HQPP L++L+YGGK   V +   +D NL  M  QM    +
Sbjct: 253 IPDIYTDTSSPLYDQYRNADHQPPVLVDLSYGGKDDDVDEQTRIDENLAIMYRQMVSGAK 312

Query: 63  TAREFLGKVIKRGNCPENG-SGSIETSPHNNLHNW 93
           T   F G   + GN       G+IE  PHNN+H W
Sbjct: 313 TPDLFFGHAYRAGNLNTGKYPGTIENMPHNNIHIW 347

[Close]

BLAST of MELO3C027837 vs. NCBI nr
Match: KAA0056963.1 (polyphenol oxidase I [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 2.5e-48
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA 60
           MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA
Sbjct: 225 MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA 284

Query: 61  REFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
           REFLGKVIKRGNCPENGSGSIETSPHNNLHNW
Sbjct: 285 REFLGKVIKRGNCPENGSGSIETSPHNNLHNW 316

[Close]

BLAST of MELO3C027837 vs. NCBI nr
Match: XP_008446626.1 (PREDICTED: polyphenol oxidase I, chloroplastic-like [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 8.3e-44
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA 60
           MCMPKIYTKPSSSLYDENRD+CHQPPKLLNLNYGGK+VKD EIVDFNLRWMNDQMSVETA
Sbjct: 79  MCMPKIYTKPSSSLYDENRDKCHQPPKLLNLNYGGKEVKDPEIVDFNLRWMNDQMSVETA 138

Query: 61  REFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
           +EFLGKVIKRGN PENGSGSIETSPHNN+H W
Sbjct: 139 KEFLGKVIKRGNGPENGSGSIETSPHNNIHIW 170

[Close]

BLAST of MELO3C027837 vs. NCBI nr
Match: KAA0056965.1 (polyphenol oxidase I [Cucumis melo var. makuwa] >TYK26391.1 polyphenol oxidase I [Cucumis melo var. makuwa] >TYK26393.1 polyphenol oxidase I [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 8.3e-44
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA 60
           MCMPKIYTKPSSSLYDENRD+CHQPPKLLNLNYGGK+VKD EIVDFNLRWMNDQMSVETA
Sbjct: 225 MCMPKIYTKPSSSLYDENRDKCHQPPKLLNLNYGGKEVKDPEIVDFNLRWMNDQMSVETA 284

Query: 61  REFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
           +EFLGKVIKRGN PENGSGSIETSPHNN+H W
Sbjct: 285 KEFLGKVIKRGNGPENGSGSIETSPHNNIHIW 316

[Close]

BLAST of MELO3C027837 vs. NCBI nr
Match: KAA0056962.1 (polyphenol oxidase I [Cucumis melo var. makuwa] >TYK26390.1 polyphenol oxidase I [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 7.6e-21
Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDS-EIVDFNLRWMNDQMSVET 60
           M MP+ Y +PSSSLYD  RD  H P KL++LNY GK    S ++VD NLRWMND+M V++
Sbjct: 223 MHMPEFYNRPSSSLYDNLRDPRHDPHKLIDLNYNGKTEDHSFDVVDCNLRWMNDRMKVQS 282

Query: 61  AREFLGKVIKRGNCPE-NGSGSIETSPHNNLHNW 93
            R FLG+V+K G  P+ +  G+IE SPHNN+H+W
Sbjct: 283 PRSFLGRVLKAGETPKPSDMGTIEQSPHNNIHDW 316

[Close]

BLAST of MELO3C027837 vs. NCBI nr
Match: XP_004146641.1 (polyphenol oxidase, chloroplastic [Cucumis sativus] >KGN64649.1 hypothetical protein Csa_013698 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 2.2e-20
Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDS-EIVDFNLRWMNDQMSVET 60
           M MP+ Y +PSSSLYD  RD  H P KL+ LNY GK    S ++VD NLRWMND+M V++
Sbjct: 222 MYMPEFYNRPSSSLYDHLRDPRHDPHKLIYLNYNGKTEDHSFDVVDCNLRWMNDRMQVQS 281

Query: 61  AREFLGKVIKRGNCPE-NGSGSIETSPHNNLHNW 93
            R FLG+V+K G  P     G+IE SPHNN+H+W
Sbjct: 282 PRSFLGRVLKAGETPNPTDMGTIEQSPHNNIHDW 315

[Close]

BLAST of MELO3C027837 vs. ExPASy TrEMBL
Match: A0A5A7UM24 (Polyphenol oxidase I OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001410 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA 60
           MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA
Sbjct: 225 MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA 284

Query: 61  REFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
           REFLGKVIKRGNCPENGSGSIETSPHNNLHNW
Sbjct: 285 REFLGKVIKRGNCPENGSGSIETSPHNNLHNW 316

[Close]

BLAST of MELO3C027837 vs. ExPASy TrEMBL
Match: A0A5A7UTU0 (Polyphenol oxidase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00530 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.0e-44
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA 60
           MCMPKIYTKPSSSLYDENRD+CHQPPKLLNLNYGGK+VKD EIVDFNLRWMNDQMSVETA
Sbjct: 225 MCMPKIYTKPSSSLYDENRDKCHQPPKLLNLNYGGKEVKDPEIVDFNLRWMNDQMSVETA 284

Query: 61  REFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
           +EFLGKVIKRGN PENGSGSIETSPHNN+H W
Sbjct: 285 KEFLGKVIKRGNGPENGSGSIETSPHNNIHIW 316

[Close]

BLAST of MELO3C027837 vs. ExPASy TrEMBL
Match: A0A1S3BFJ5 (polyphenol oxidase I, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489300 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.0e-44
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDSEIVDFNLRWMNDQMSVETA 60
           MCMPKIYTKPSSSLYDENRD+CHQPPKLLNLNYGGK+VKD EIVDFNLRWMNDQMSVETA
Sbjct: 79  MCMPKIYTKPSSSLYDENRDKCHQPPKLLNLNYGGKEVKDPEIVDFNLRWMNDQMSVETA 138

Query: 61  REFLGKVIKRGNCPENGSGSIETSPHNNLHNW 93
           +EFLGKVIKRGN PENGSGSIETSPHNN+H W
Sbjct: 139 KEFLGKVIKRGNGPENGSGSIETSPHNNIHIW 170

[Close]

BLAST of MELO3C027837 vs. ExPASy TrEMBL
Match: A0A5A7UM88 (Polyphenol oxidase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00520 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.7e-21
Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDS-EIVDFNLRWMNDQMSVET 60
           M MP+ Y +PSSSLYD  RD  H P KL++LNY GK    S ++VD NLRWMND+M V++
Sbjct: 223 MHMPEFYNRPSSSLYDNLRDPRHDPHKLIDLNYNGKTEDHSFDVVDCNLRWMNDRMKVQS 282

Query: 61  AREFLGKVIKRGNCPE-NGSGSIETSPHNNLHNW 93
            R FLG+V+K G  P+ +  G+IE SPHNN+H+W
Sbjct: 283 PRSFLGRVLKAGETPKPSDMGTIEQSPHNNIHDW 316

[Close]

BLAST of MELO3C027837 vs. ExPASy TrEMBL
Match: A0A0A0LUI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073090 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 1   MCMPKIYTKPSSSLYDENRDECHQPPKLLNLNYGGKKVKDS-EIVDFNLRWMNDQMSVET 60
           M MP+ Y +PSSSLYD  RD  H P KL+ LNY GK    S ++VD NLRWMND+M V++
Sbjct: 222 MYMPEFYNRPSSSLYDHLRDPRHDPHKLIYLNYNGKTEDHSFDVVDCNLRWMNDRMQVQS 281

Query: 61  AREFLGKVIKRGNCPE-NGSGSIETSPHNNLHNW 93
            R FLG+V+K G  P     G+IE SPHNN+H+W
Sbjct: 282 PRSFLGRVLKAGETPNPTDMGTIEQSPHNNIHDW 315

The following BLAST results are available for this feature:

BLAST of MELO3C027837 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZP19	7.1e-14	42.71	Polyphenol oxidase I, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-1 PE=1 SV=1	[more]
Q06215	8.7e-12	39.58	Polyphenol oxidase A1, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1	[more]
P43309	1.5e-11	39.58	Polyphenol oxidase, chloroplastic OS=Malus domestica OX=3750 PE=1 SV=1	[more]
P43311	1.5e-11	38.54	Polyphenol oxidase, chloroplastic OS=Vitis vinifera OX=29760 PE=1 SV=1	[more]
O81103	1.9e-11	43.16	Polyphenol oxidase latent form, chloroplastic OS=Prunus armeniaca OX=36596 GN=PP...	[more]

BLAST of MELO3C027837 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056963.1	2.5e-48	100.00	polyphenol oxidase I [Cucumis melo var. makuwa]	[more]
XP_008446626.1	8.3e-44	92.39	PREDICTED: polyphenol oxidase I, chloroplastic-like [Cucumis melo]	[more]
KAA0056965.1	8.3e-44	92.39	polyphenol oxidase I [Cucumis melo var. makuwa] >TYK26391.1 polyphenol oxidase I...	[more]
KAA0056962.1	7.6e-21	55.32	polyphenol oxidase I [Cucumis melo var. makuwa] >TYK26390.1 polyphenol oxidase I...	[more]
XP_004146641.1	2.2e-20	55.32	polyphenol oxidase, chloroplastic [Cucumis sativus] >KGN64649.1 hypothetical pro...	[more]

BLAST of MELO3C027837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UM24	1.2e-48	100.00	Polyphenol oxidase I OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G...	[more]
A0A5A7UTU0	4.0e-44	92.39	Polyphenol oxidase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861...	[more]
A0A1S3BFJ5	4.0e-44	92.39	polyphenol oxidase I, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489300...	[more]
A0A5A7UM88	3.7e-21	55.32	Polyphenol oxidase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861...	[more]
A0A0A0LUI1	1.1e-20	55.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073090 PE=3 SV=1	[more]

BLAST of MELO3C027837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008922	Uncharacterised domain, di-copper centre	GENE3D	1.10.1280.10		coord: 1..92 e-value: 1.1E-15 score: 59.9
IPR008922	Uncharacterised domain, di-copper centre	SUPERFAMILY	48056	Di-copper centre-containing domain	coord: 2..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..92
None	No IPR available	PANTHER	PTHR11474:SF87	POLYPHENOL OXIDASE, CHLOROPLASTIC-LIKE	coord: 1..92
None	No IPR available	PANTHER	PTHR11474	TYROSINASE FAMILY MEMBER	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027837.1	MELO3C027837.1	mRNA