MELO3C027816 (gene) Melon (DHL92) v4

Overview
NameMELO3C027816
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionULP_PROTEASE domain-containing protein
Locationchr11: 8720877 .. 8721044 (+)
RNA-Seq ExpressionMELO3C027816
SyntenyMELO3C027816
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATATCAATGAATACAGATTCATCGTCTGTGAATAGACACTGTTTGAATGATGTGTTAACCCAAGCATTGGGTACAAAAGAGCACAATGGTCGTGTGCGTGGGATTGTTGGATACGTAACTCCGACAACGTACTTTCATTCAGTTTAAAAAACATCAAAAGAAG

mRNA sequence

ATGAGATATCAATGAATACAGATTCATCGTCTGTGAATAGACACTGTTTGAATGATGTGTTAACCCAAGCATTGGGTACAAAAGAGCACAATGGTCGTGTGCGTGGGATTGTTGGATACGTAACTCCGACAACGTACTTTCATTCAGTTTAAAAAACATCAAAAGAAG

Coding sequence (CDS)

ATGAATACAGATTCATCGTCTGTGAATAGACACTGTTTGAATGATGTGTTAACCCAAGCATTGGGTACAAAAGAGCACAATGGTCGTGTGCGTGGGATTGTTGGATACGTAACTCCGACAACGTACTTTCATTCAGTTTAA

Protein sequence

MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV
Homology
BLAST of MELO3C027816 vs. NCBI nr
Match: TYK24336.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK24781.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16
Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGVGGYVTPTTYFHSV 251

BLAST of MELO3C027816 vs. NCBI nr
Match: TYK01338.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHCLNDVLTQALGTKEHNGR+RG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCLNDVLTQALGTKEHNGRMRGVGGYVTPTTYFHSV 251

BLAST of MELO3C027816 vs. NCBI nr
Match: KAA0055587.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHCLNDVLTQALGTKEHNGR+RG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCLNDVLTQALGTKEHNGRMRGVGGYVTPTTYFHSV 251

BLAST of MELO3C027816 vs. NCBI nr
Match: TYK30266.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHCLNDVLTQALGTKEHNGR+RG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCLNDVLTQALGTKEHNGRMRGVGGYVTPTTYFHSV 251

BLAST of MELO3C027816 vs. NCBI nr
Match: KAA0049744.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 6.3e-16
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHC NDVLTQALGTKEHNGRVRG+ GYVTPTTYFHSV
Sbjct: 158 MNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVGGYVTPTTYFHSV 203

BLAST of MELO3C027816 vs. ExPASy TrEMBL
Match: A0A5D3DME5 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00220 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.1e-17
Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGVGGYVTPTTYFHSV 251

BLAST of MELO3C027816 vs. ExPASy TrEMBL
Match: A0A5D3E302 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00200 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHCLNDVLTQALGTKEHNGR+RG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCLNDVLTQALGTKEHNGRMRGVGGYVTPTTYFHSV 251

BLAST of MELO3C027816 vs. ExPASy TrEMBL
Match: A0A5D3BQQ2 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00170 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHCLNDVLTQALGTKEHNGR+RG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCLNDVLTQALGTKEHNGRMRGVGGYVTPTTYFHSV 251

BLAST of MELO3C027816 vs. ExPASy TrEMBL
Match: A0A5A7ULY3 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00690 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHCLNDVLTQALGTKEHNGR+RG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCLNDVLTQALGTKEHNGRMRGVGGYVTPTTYFHSV 251

BLAST of MELO3C027816 vs. ExPASy TrEMBL
Match: A0A5D3C8G6 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001550 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-16
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0

Query: 1   MNTDSSSVNRHCLNDVLTQALGTKEHNGRVRGIVGYVTPTTYFHSV 47
           MNTDSSSVNRHC NDVLTQALGTKEHNGRVRG+ GYVTPTTYFHSV
Sbjct: 206 MNTDSSSVNRHCSNDVLTQALGTKEHNGRVRGVGGYVTPTTYFHSV 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK24336.11.3e-1695.65putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK247... [more]
TYK01338.12.8e-1693.48putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
KAA0055587.12.8e-1693.48putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
TYK30266.12.8e-1693.48putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa][more]
KAA0049744.16.3e-1693.48transposase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DME56.1e-1795.65Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3E3021.4e-1693.48Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3BQQ21.4e-1693.48Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7ULY31.4e-1693.48Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3C8G63.0e-1693.48Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027816.1MELO3C027816.1mRNA