MELO3C027753 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027753
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 7457508 .. 7457918 (-)
RNA-Seq Expression	MELO3C027753
Synteny	MELO3C027753

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGACTCTTGGAATCAATATTTCTGGTGGCCTTCAAATTGTGAATCCATTGGACAGTTTGCTTCTTGAGGTATGTGTTCCACTTGTGCTTAATCATTGTCGTGCTATACTTGGAATTGACGCCCAGTTTGAAGGTATTATAGATGGTCACTTTGAGGTTGGACCAAATGGCAAAACATATACCCTTAAGTTGAAACTAAAGGTCAGGATTGGTGATGCTTATGTTATTAAGATCGTTGTGGTTAAATTCTTTTGGCCATTCATTGGCCTTCCAACAAACCTTCTGTCTTTCGAGTATGTTGAAGAAATCAACATCTAAAAGCCATGAAATCATGCTATGTATAATGAAAATGTTGCTTTCTTATGCATCATTTTCATCTCTTATATATGTATCAATAAATATGTAAAACT

mRNA sequence

GATGACTCTTGGAATCAATATTTCTGGTGGCCTTCAAATTGTGAATCCATTGGACAGTTTGCTTCTTGAGGTATGTGTTCCACTTGTGCTTAATCATTGTCGTGCTATACTTGGAATTGACGCCCAGTTTGAAGGTATTATAGATGGTCACTTTGAGGTTGGACCAAATGGCAAAACATATACCCTTAAGTTGAAACTAAAGGTCAGGATTGGTGATGCTTATGTTATTAAGATCGTTGTGGTTAAATTCTTTTGGCCATTCATTGGCCTTCCAACAAACCTTCTGTCTTTCGAGTATGTTGAAGAAATCAACATCTAAAAGCCATGAAATCATGCTATGTATAATGAAAATGTTGCTTTCTTATGCATCATTTTCATCTCTTATATATGTATCAATAAATATGTAAAACT

Coding sequence (CDS)

ATGACTCTTGGAATCAATATTTCTGGTGGCCTTCAAATTGTGAATCCATTGGACAGTTTGCTTCTTGAGGTATGTGTTCCACTTGTGCTTAATCATTGTCGTGCTATACTTGGAATTGACGCCCAGTTTGAAGGTATTATAGATGGTCACTTTGAGGTTGGACCAAATGGCAAAACATATACCCTTAAGTTGAAACTAAAGGTCAGGATTGGTGATGCTTATGTTATTAAGATCGTTGTGGTTAAATTCTTTTGGCCATTCATTGGCCTTCCAACAAACCTTCTGTCTTTCGAGTATGTTGAAGAAATCAACATCTAA

Protein sequence

MTLGINISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI

Homology

[Close]

BLAST of MELO3C027753 vs. NCBI nr
Match: KAA0040704.1 (hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa] >TYK00712.1 hypothetical protein E5676_scaffold75352G00010 [Cucumis melo var. makuwa] >TYK14273.1 hypothetical protein E5676_scaffold4170G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 9.5e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MTLGINISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTY 60
           MTLGINISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTY
Sbjct: 1   MTLGINISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTY 60

Query: 61  TLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 106
           TLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI
Sbjct: 61  TLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 105

[Close]

BLAST of MELO3C027753 vs. NCBI nr
Match: KAE8647454.1 (hypothetical protein Csa_003781 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 2.5e-28
Identity = 70/108 (64.81%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 1   MTLGINISGGLQIVNPL---DSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNG 60
           MTLGI ISGGLQIV PL   D+ L ++ V  V+ HC+++L IDA FEG+IDG  E+G NG
Sbjct: 1   MTLGIGISGGLQIV-PLDLSDNTLCDLLVQHVMKHCQSVLQIDATFEGLIDGKIEIGLNG 60

Query: 61  KTYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 106
           KTYTLKLK+KVRIGDAYV+KIV+V+ F+PF+G P +++SFEY+EEINI
Sbjct: 61  KTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYP-SVVSFEYLEEINI 106

[Close]

BLAST of MELO3C027753 vs. NCBI nr
Match: KGN48337.1 (hypothetical protein Csa_004454 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 4.2e-23
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 14  VNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTYTLKLKLKVRIGDA 73
           V+P D  L+E CVPLV+NHC++I  ID +FEGI+ G  EVGPNGKTYTL+LKLK ++GD 
Sbjct: 14  VDPSDRSLIEQCVPLVINHCQSIHQIDVKFEGILHGQCEVGPNGKTYTLRLKLKDKVGDR 73

Query: 74  YVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 106
           YV+KI V+KFF P  G P +LLSFE  +EIN+
Sbjct: 74  YVLKIGVIKFFCPLFG-PPSLLSFECSKEINV 104

[Close]

BLAST of MELO3C027753 vs. NCBI nr
Match: XP_031744690.1 (actin-related protein 2-like [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 2.9e-08
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 36  ILGIDAQFEGIIDGHFEVGPNGKTYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLL 95
           +L I+   E ++D   EV  NGKT+TLKLKLKV++ D+   KI VVK FWP IGLPT +L
Sbjct: 58  VLKIEVDIEAVLDVVHEVNSNGKTFTLKLKLKVKLLDSVDTKIAVVKIFWPPIGLPT-IL 117

Query: 96  SFEYVE 102
           SF  VE
Sbjct: 118 SFLCVE 122

[Close]

BLAST of MELO3C027753 vs. ExPASy TrEMBL
Match: A0A5D3BPM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4170G00020 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 4.6e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MTLGINISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTY 60
           MTLGINISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTY
Sbjct: 1   MTLGINISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTY 60

Query: 61  TLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 106
           TLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI
Sbjct: 61  TLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 105

[Close]

BLAST of MELO3C027753 vs. ExPASy TrEMBL
Match: A0A0A0KFK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483240 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.2e-29
Identity = 71/108 (65.74%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 1   MTLGINISGGLQIVNPL---DSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNG 60
           MTLGI ISGGLQIV PL   D+ L ++ V  V+ HC+++L IDA FEG+IDG  E+G NG
Sbjct: 1   MTLGIGISGGLQIV-PLDLSDNTLCDLLVQHVMKHCQSVLQIDATFEGLIDGKIEIGLNG 60

Query: 61  KTYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 106
           KTYTLKLK+KVRIGDAYV+KIV+VK F+PF+G P +++SFEY+EEINI
Sbjct: 61  KTYTLKLKIKVRIGDAYVVKIVLVKLFFPFVGFP-SVVSFEYLEEINI 106

[Close]

BLAST of MELO3C027753 vs. ExPASy TrEMBL
Match: A0A0A0KKQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483230 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27
Identity = 69/108 (63.89%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 1   MTLGINISGGLQIVNPL---DSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNG 60
           MTLGI I GGLQIV PL   D+ L ++ V  V+ HC+++L IDA FEG IDG  E+G NG
Sbjct: 1   MTLGIGIGGGLQIV-PLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNG 60

Query: 61  KTYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 106
           KTY LKLKLKVRIGDAYV+KIV+VK F+PF+G P +++SFEY+EEI+I
Sbjct: 61  KTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFP-SVVSFEYLEEISI 106

[Close]

BLAST of MELO3C027753 vs. ExPASy TrEMBL
Match: A0A0A0KIX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483235 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.0e-23
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 14  VNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTYTLKLKLKVRIGDA 73
           V+P D  L+E CVPLV+NHC++I  ID +FEGI+ G  EVGPNGKTYTL+LKLK ++GD 
Sbjct: 14  VDPSDRSLIEQCVPLVINHCQSIHQIDVKFEGILHGQCEVGPNGKTYTLRLKLKDKVGDR 73

Query: 74  YVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 106
           YV+KI V+KFF P  G P +LLSFE  +EIN+
Sbjct: 74  YVLKIGVIKFFCPLFG-PPSLLSFECSKEINV 104

[Close]

BLAST of MELO3C027753 vs. ExPASy TrEMBL
Match: A0A0A0KFL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483250 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-22
Identity = 57/103 (55.34%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 1   MTLGINISGGLQIV--NPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGK 60
           M++G+ I G LQIV  +  D+ L ++ V  V+ HC+ +L IDA +EG IDG  E+G NGK
Sbjct: 1   MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGK 60

Query: 61  TYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVE 102
           TY+ KLKLK+++GDAYVIK V+VK F+PFIGLP +++SFEY+E
Sbjct: 61  TYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLP-SIVSFEYLE 102

The following BLAST results are available for this feature:

BLAST of MELO3C027753 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040704.1	9.5e-52	100.00	hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa] >TYK0071...	[more]
KAE8647454.1	2.5e-28	64.81	hypothetical protein Csa_003781 [Cucumis sativus]	[more]
KGN48337.1	4.2e-23	61.96	hypothetical protein Csa_004454 [Cucumis sativus]	[more]
XP_031744690.1	2.9e-08	56.06	actin-related protein 2-like [Cucumis sativus]	[more]

BLAST of MELO3C027753 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027753 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPM4	4.6e-52	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KFK8	4.2e-29	65.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483240 PE=4 SV=1	[more]
A0A0A0KKQ8	2.3e-27	63.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483230 PE=4 SV=1	[more]
A0A0A0KIX9	2.0e-23	61.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483235 PE=4 SV=1	[more]
A0A0A0KFL5	1.7e-22	55.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483250 PE=4 SV=1	[more]

BLAST of MELO3C027753 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027753.1	MELO3C027753.1	mRNA