MELO3C027678 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027678
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Aspartic proteinase A1-like
Location	chr03: 15203580 .. 15203840 (+)
RNA-Seq Expression	MELO3C027678
Synteny	MELO3C027678

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGATTGGTATTGGTACTCCCCCTCAAAAGTTTACTGTTGTTTTTTACACTGGTAGTTCAAATTTGTGGGATCCATCATCCAAGTGCTTCTTTATTTGTCTATTATATATTATAGCATGAAATGATTTTGAGTTGTCTACAGGTGGCTTGTCTACTCCCTTTCAAGTACAAGTCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGCGTTCAAGTACTTATAAAAATAATGGTCCGTAAGAATTAA

mRNA sequence

TGAGATTGGTATTGGTACTCCCCCTCAAAAGTTTACTGTTGTTTTTTACACTGGTAGTTCAAATTTGTGGGATCCATCATCCAAGTGCTTCTTTGTGGCTTGTCTACTCCCTTTCAAGTACAAGTCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGCGTTCAAGTACTTATAAAAATAATGGTCCGTAAGAATTAA

Coding sequence (CDS)

GAGATTGGTATTGGTACTCCCCCTCAAAAGTTTACTGTTGTTTTTTACACTGGTAGTTCAAATTTGTGGGATCCATCATCCAAGTGCTTCTTTGTGGCTTGTCTACTCCCTTTCAAGTACAAGTCAAAACGTTTGAATACTTATAAAAAGAATGATCAGTACAAGTCAAAGCGTTCAAGTACTTATAAAAATAATGGTCCGTAA

Protein sequence

EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSSTYKNNGP

Homology

[Close]

BLAST of MELO3C027678 vs. NCBI nr
Match: TYK07944.1 (aspartic proteinase A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 4.8e-25
Identity = 61/67 (91.04%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSS 60
          EIGIGTPPQKFTV F TGSSNLW PSSKCF VACLL FKYKSKRLNTYKKNDQYKSKRSS
Sbjct: 24 EIGIGTPPQKFTVAFDTGSSNLWVPSSKCFSVACLLYFKYKSKRLNTYKKNDQYKSKRSS 83

Query: 61 TYKNNGP 68
          TYK NGP
Sbjct: 84 TYKKNGP 90

[Close]

BLAST of MELO3C027678 vs. NCBI nr
Match: TYK26663.1 (peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 51/56 (91.07%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 12  TVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSSTYKNNGP 68
           TVVF TGSSNLW PSSKCF VACLL FKYKSKRLNTYKKNDQYKSKRSSTYK NGP
Sbjct: 268 TVVFDTGSSNLWVPSSKCFSVACLLHFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 323

[Close]

BLAST of MELO3C027678 vs. NCBI nr
Match: TYK28123.1 (aspartic proteinase A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.6e-15
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQ 54
           EIGIGTPPQKF VVF  GSSNLW PSSKCF VACLL FKYKSKRL+ YKKND+
Sbjct: 174 EIGIGTPPQKFPVVFDIGSSNLWVPSSKCFSVACLLHFKYKSKRLHAYKKNDR 226

[Close]

BLAST of MELO3C027678 vs. NCBI nr
Match: KAA0065836.1 (aspartic proteinase A1-like [Cucumis melo var. makuwa] >TYK24045.1 aspartic proteinase A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.0e-14
Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSS 60
           EIGIGTPPQKFTVVF TGSSNLW PSSKCF VACLL  KYKSKR +TYKKN +  S +  
Sbjct: 93  EIGIGTPPQKFTVVFDTGSSNLWVPSSKCFSVACLLHSKYKSKRSSTYKKNGKPASIKYG 152

Query: 61  T 62
           T
Sbjct: 153 T 153

[Close]

BLAST of MELO3C027678 vs. NCBI nr
Match: XP_038905979.1 (aspartic proteinase A1-like [Benincasa hispida])

HSP 1 Score: 89.7 bits (221), Expect = 1.0e-14
Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSS 60
           EIGIGTPPQKFTVVF TGSSNLW PSSKCF VACLL  KYKSKR +TYKKN +  S +  
Sbjct: 88  EIGIGTPPQKFTVVFDTGSSNLWVPSSKCFSVACLLHSKYKSKRSSTYKKNGKPASIKYG 147

Query: 61  T 62
           T
Sbjct: 148 T 148

[Close]

BLAST of MELO3C027678 vs. ExPASy Swiss-Prot
Match: O65390 (Aspartic proteinase A1 OS=Arabidopsis thaliana OX=3702 GN=APA1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 8.0e-15
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKN 52
           EI IGTPPQKFTVVF TGSSNLW PSSKC+F +ACLL  KYKS R +TY+KN
Sbjct: 85  EIAIGTPPQKFTVVFDTGSSNLWVPSSKCYFSLACLLHPKYKSSRSSTYEKN 136

[Close]

BLAST of MELO3C027678 vs. ExPASy Swiss-Prot
Match: P40782 (Cyprosin (Fragment) OS=Cynara cardunculus OX=4265 GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-14
Identity = 39/52 (75.00%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKN 52
           EIGIGTPPQKFTV+F TGSSNLW PSSKC+F VACL   KY+S    TYKKN
Sbjct: 54  EIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKN 105

[Close]

BLAST of MELO3C027678 vs. ExPASy Swiss-Prot
Match: P42210 (Phytepsin OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-13
Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKN 52
           EIG+GTPPQKFTV+F TGSSNLW PS+KC+F +AC L  +YK+   +TYKKN
Sbjct: 87  EIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKN 138

[Close]

BLAST of MELO3C027678 vs. ExPASy Swiss-Prot
Match: Q42456 (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-13
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKN 52
           EIG+GTPPQKFTV+F TGSSNLW PS+KC+F +AC    +YKS + +TY+KN
Sbjct: 88  EIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKN 139

[Close]

BLAST of MELO3C027678 vs. ExPASy Swiss-Prot
Match: Q8VYL3 (Aspartic proteinase A2 OS=Arabidopsis thaliana OX=3702 GN=APA2 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.8e-13
Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKNDQYKSKRS 60
           EI IGTPPQKFTV+F TGSSNLW PS KCFF ++C    KYKS R +TYKK+     KR+
Sbjct: 92  EIAIGTPPQKFTVIFDTGSSNLWVPSGKCFFSLSCYFHAKYKSSRSSTYKKS----GKRA 151

Query: 61  STYKNNG 67
           + +  +G
Sbjct: 152 AIHYGSG 154

[Close]

BLAST of MELO3C027678 vs. ExPASy TrEMBL
Match: A0A5D3C9N6 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00610 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.3e-25
Identity = 61/67 (91.04%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSS 60
          EIGIGTPPQKFTV F TGSSNLW PSSKCF VACLL FKYKSKRLNTYKKNDQYKSKRSS
Sbjct: 24 EIGIGTPPQKFTVAFDTGSSNLWVPSSKCFSVACLLYFKYKSKRLNTYKKNDQYKSKRSS 83

Query: 61 TYKNNGP 68
          TYK NGP
Sbjct: 84 TYKKNGP 90

[Close]

BLAST of MELO3C027678 vs. ExPASy TrEMBL
Match: A0A5D3DSU7 (Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003180 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.3e-19
Identity = 51/56 (91.07%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 12  TVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSSTYKNNGP 68
           TVVF TGSSNLW PSSKCF VACLL FKYKSKRLNTYKKNDQYKSKRSSTYK NGP
Sbjct: 268 TVVFDTGSSNLWVPSSKCFSVACLLHFKYKSKRLNTYKKNDQYKSKRSSTYKKNGP 323

[Close]

BLAST of MELO3C027678 vs. ExPASy TrEMBL
Match: A0A5D3DWQ8 (Aspartic proteinase A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00290 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.5e-16
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQ 54
           EIGIGTPPQKF VVF  GSSNLW PSSKCF VACLL FKYKSKRL+ YKKND+
Sbjct: 174 EIGIGTPPQKFPVVFDIGSSNLWVPSSKCFSVACLLHFKYKSKRLHAYKKNDR 226

[Close]

BLAST of MELO3C027678 vs. ExPASy TrEMBL
Match: A0A5D3DKC0 (Aspartic proteinase A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00070 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.9e-15
Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSS 60
           EIGIGTPPQKFTVVF TGSSNLW PSSKCF VACLL  KYKSKR +TYKKN +  S +  
Sbjct: 93  EIGIGTPPQKFTVVFDTGSSNLWVPSSKCFSVACLLHSKYKSKRSSTYKKNGKPASIKYG 152

Query: 61  T 62
           T
Sbjct: 153 T 153

[Close]

BLAST of MELO3C027678 vs. ExPASy TrEMBL
Match: A0A1S4DY11 (aspartic proteinase A1-like OS=Cucumis melo OX=3656 GN=LOC103491074 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.9e-15
Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFFVACLLPFKYKSKRLNTYKKNDQYKSKRSS 60
           EIGIGTPPQKFTVVF TGSSNLW PSSKCF VACLL  KYKSKR +TYKKN +  S +  
Sbjct: 93  EIGIGTPPQKFTVVFDTGSSNLWVPSSKCFSVACLLHSKYKSKRSSTYKKNGKPASIKYG 152

Query: 61  T 62
           T
Sbjct: 153 T 153

[Close]

BLAST of MELO3C027678 vs. TAIR 10
Match: AT1G11910.1 (aspartic proteinase A1 )

HSP 1 Score: 80.5 bits (197), Expect = 5.7e-16
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKN 52
           EI IGTPPQKFTVVF TGSSNLW PSSKC+F +ACLL  KYKS R +TY+KN
Sbjct: 85  EIAIGTPPQKFTVVFDTGSSNLWVPSSKCYFSLACLLHPKYKSSRSSTYEKN 136

[Close]

BLAST of MELO3C027678 vs. TAIR 10
Match: AT1G62290.1 (Saposin-like aspartyl protease family protein )

HSP 1 Score: 73.6 bits (179), Expect = 7.0e-14
Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKNDQYKSKRS 60
           EI IGTPPQKFTV+F TGSSNLW PS KCFF ++C    KYKS R +TYKK+     KR+
Sbjct: 92  EIAIGTPPQKFTVIFDTGSSNLWVPSGKCFFSLSCYFHAKYKSSRSSTYKKS----GKRA 151

Query: 61  STYKNNG 67
           + +  +G
Sbjct: 152 AIHYGSG 154

[Close]

BLAST of MELO3C027678 vs. TAIR 10
Match: AT1G62290.2 (Saposin-like aspartyl protease family protein )

HSP 1 Score: 73.6 bits (179), Expect = 7.0e-14
Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKNDQYKSKRS 60
           EI IGTPPQKFTV+F TGSSNLW PS KCFF ++C    KYKS R +TYKK+     KR+
Sbjct: 92  EIAIGTPPQKFTVIFDTGSSNLWVPSGKCFFSLSCYFHAKYKSSRSSTYKKS----GKRA 151

Query: 61  STYKNNG 67
           + +  +G
Sbjct: 152 AIHYGSG 154

[Close]

BLAST of MELO3C027678 vs. TAIR 10
Match: AT4G04460.1 (Saposin-like aspartyl protease family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-12
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKNDQYKSKRS 60
           +I IGTPPQKFTV+F TGSSNLW PS+KC+  VAC    KYK+ + ++Y+KN +  S R 
Sbjct: 90  DITIGTPPQKFTVIFDTGSSNLWIPSTKCYLSVACYFHSKYKASQSSSYRKNGKPASIRY 149

Query: 61  ST 62
            T
Sbjct: 150 GT 151

[Close]

BLAST of MELO3C027678 vs. TAIR 10
Match: AT4G04460.2 (Saposin-like aspartyl protease family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-12
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1   EIGIGTPPQKFTVVFYTGSSNLWDPSSKCFF-VACLLPFKYKSKRLNTYKKNDQYKSKRS 60
           +I IGTPPQKFTV+F TGSSNLW PS+KC+  VAC    KYK+ + ++Y+KN +  S R 
Sbjct: 90  DITIGTPPQKFTVIFDTGSSNLWIPSTKCYLSVACYFHSKYKASQSSSYRKNGKPASIRY 149

Query: 61  ST 62
            T
Sbjct: 150 GT 151

The following BLAST results are available for this feature:

BLAST of MELO3C027678 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07944.1	4.8e-25	91.04	aspartic proteinase A1-like [Cucumis melo var. makuwa]	[more]
TYK26663.1	1.5e-18	91.07	peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa]	[more]
TYK28123.1	1.6e-15	83.02	aspartic proteinase A1-like [Cucumis melo var. makuwa]	[more]
KAA0065836.1	1.0e-14	75.41	aspartic proteinase A1-like [Cucumis melo var. makuwa] >TYK24045.1 aspartic prot...	[more]
XP_038905979.1	1.0e-14	75.41	aspartic proteinase A1-like [Benincasa hispida]	[more]

BLAST of MELO3C027678 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65390	8.0e-15	76.92	Aspartic proteinase A1 OS=Arabidopsis thaliana OX=3702 GN=APA1 PE=1 SV=1	[more]
P40782	1.4e-14	75.00	Cyprosin (Fragment) OS=Cynara cardunculus OX=4265 GN=CYPRO1 PE=1 SV=2	[more]
P42210	1.2e-13	67.31	Phytepsin OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
Q42456	2.0e-13	65.38	Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g...	[more]
Q8VYL3	9.8e-13	58.21	Aspartic proteinase A2 OS=Arabidopsis thaliana OX=3702 GN=APA2 PE=2 SV=1	[more]

BLAST of MELO3C027678 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9N6	2.3e-25	91.04	Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00610 P...	[more]
A0A5D3DSU7	7.3e-19	91.07	Beta-amylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003180 ...	[more]
A0A5D3DWQ8	7.5e-16	83.02	Aspartic proteinase A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3DKC0	4.9e-15	75.41	Aspartic proteinase A1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S4DY11	4.9e-15	75.41	aspartic proteinase A1-like OS=Cucumis melo OX=3656 GN=LOC103491074 PE=3 SV=1	[more]

BLAST of MELO3C027678 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11910.1	5.7e-16	76.92	aspartic proteinase A1	[more]
AT1G62290.1	7.0e-14	58.21	Saposin-like aspartyl protease family protein	[more]
AT1G62290.2	7.0e-14	58.21	Saposin-like aspartyl protease family protein	[more]
AT4G04460.1	1.3e-12	56.45	Saposin-like aspartyl protease family protein	[more]
AT4G04460.2	1.3e-12	56.45	Saposin-like aspartyl protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033121	Peptidase family A1 domain	PFAM	PF00026	Asp	coord: 1..53 e-value: 1.7E-14 score: 54.0
IPR033121	Peptidase family A1 domain	PROSITE	PS51767	PEPTIDASE_A1	coord: 1..67 score: 16.745459
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..61 e-value: 1.1E-14 score: 56.5
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 1..66
None	No IPR available	PANTHER	PTHR47966:SF39	ASPARTIC PROTEINASE A1-LIKE	coord: 1..52
IPR001461	Aspartic peptidase A1 family	PANTHER	PTHR47966	BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED	coord: 1..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027678.1	MELO3C027678.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity