MELO3C027615 (gene) Melon (DHL92) v4

Overview
NameMELO3C027615
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionVat protein
Locationchr05: 26149781 .. 26151117 (+)
RNA-Seq ExpressionMELO3C027615
SyntenyMELO3C027615
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTTAAGCATTTGTGGAGTGAAGAATGCTCACAAAACAATATCACCTCAGTTCTTCAACATTTGTGTTCTCTAGGAATTTCAGATTGTGGAAGATTGAGTAGTTTAGTGTCATCATTAGTGTGTTTTACAAACTTGCAACATCTTCATGTGAATAAATGTCATAGACTAACCCATTTGCTGAATCCTTCGGTGGCTACAACGCTTGTGCAACTTGAAGGTTTGACAGTAGAAGAATGCAAAAGGATGAGTAGTGTAATTGAGGAAGGATCAACCGAAGAAGATGGAAATGATGAAATGGTTGTATTCAACAACCTACAAAATTTATACATTTTTAATTGTTCCAACCTAACAAGCTTTTATTGTGGGAGATGCATCATTAAATTTCCATGTTTGGAAAGAGTATTCATTCAAAAGTGTCCTGAAATGAAGGTCTTTTCACTTGGAATTGTAAGCACACCTCGATTGAAATATGAAAATTTTTATTTAAAGAAAGATTACGATGATGAACGGTGTCATCCTAAATATCCCAAAGAGATGTTGGTGGAAGATATGAATGTCATGACCAGAGAATATTGGGAGGATAATGTTGATACCGGAATTCCAAATTTATTTGCCGAACAGGTTTGTATATTTAATTACCTTTTCATATTTGGTAATAATTAATTTTTATTATTTGTGTGTTAGAGTATGAACTTTAATGAATTTATTTAATTAATGCAGAGTTTGGAGGAAAACCGATCTGAAAATTCTTCTTCTTCAAAGAATAATGTTGAGAAAGAATAAGGAATTATATGTGTGCATTTATTTGCAAAGGAAGCTGCCAAATAACCTACTCAATCCTAGCAGATGCGTTCTTTGCAAGTCGGCTGTCGAAGACTTGAACCATATTTTCACAACCTGTGCCAATTCGCAAATAGCCTCTGCTGGGTGAAACTGCAGTACCAAATTGGTGGAAACTTTGATACAAACAATATCAAAGCCCTCTGTTGGTCTCTTAGCTTGCTGAAACAATCAAACAGAAAGAACATCATTCTCTCGATGTAGGTGTGGATCTTCTTTTGTCCATTTGGGTGGAAAGAAACAATAGGATTTTCATAGACACAGAAAGAAGCTTAGTCACATTTGGGAAGATATCGAAACTTTGATTGGACCATGGTCGAGTAGAAACAAAATGTTCAAAGACTACAATCCAACATCAATCTTTAAACTTTAGAGCTTTGTTAGATTAATGTTTGTTGTATATGGCTTCCCTGTAGCCAAAGAAATATACATTGTAACAATGGTTTGATGAAATGATAATGAAGTGGTATGGTGTGTTTCAATTGCAAAAAATA

mRNA sequence

AAGCTTAAGCATTTGTGGAGTGAAGAATGCTCACAAAACAATATCACCTCAGTTCTTCAACATTTGTGTTCTCTAGGAATTTCAGATTGTGGAAGATTGAGTAGTTTAGTGTCATCATTAGTGTGTTTTACAAACTTGCAACATCTTCATGTGAATAAATGTCATAGACTAACCCATTTGCTGAATCCTTCGGTGGCTACAACGCTTGTGCAACTTGAAGGTTTGACAGTAGAAGAATGCAAAAGGATGAGTAGTGTAATTGAGGAAGGATCAACCGAAGAAGATGGAAATGATGAAATGAAAGATTACGATGATGAACGGTGTCATCCTAAATATCCCAAAGAGATGTTGGTGGAAGATATGAATGTCATGACCAGAGAATATTGGGAGGATAATGTTGATACCGGAATTCCAAATTTATTTGCCGAACAGAGTTTGGAGGAAAACCGATCTGAAAATTCTTCTTCTTCAAAGAATAATGTTGAGAAAGAATAAGGAATTATATGTGTGCATTTATTTGCAAAGGAAGCTGCCAAATAACCTACTCAATCCTAGCAGATGCGTTCTTTGCAAGTCGGCTGTCGAAGACTTGAACCATATTTTCACAACCTGTGCCAATTCGCAAATAGCCTCTGCTGGGTGAAACTGCAGTACCAAATTGGTGGAAACTTTGATACAAACAATATCAAAGCCCTCTGTTGGTCTCTTAGCTTGCTGAAACAATCAAACAGAAAGAACATCATTCTCTCGATGTAGGTGTGGATCTTCTTTTGTCCATTTGGGTGGAAAGAAACAATAGGATTTTCATAGACACAGAAAGAAGCTTAGTCACATTTGGGAAGATATCGAAACTTTGATTGGACCATGGTCGAGTAGAAACAAAATGTTCAAAGACTACAATCCAACATCAATCTTTAAACTTTAGAGCTTTGTTAGATTAATGTTTGTTGTATATGGCTTCCCTGTAGCCAAAGAAATATACATTGTAACAATGGTTTGATGAAATGATAATGAAGTGGTATGGTGTGTTTCAATTGCAAAAAATA

Coding sequence (CDS)

AAGCTTAAGCATTTGTGGAGTGAAGAATGCTCACAAAACAATATCACCTCAGTTCTTCAACATTTGTGTTCTCTAGGAATTTCAGATTGTGGAAGATTGAGTAGTTTAGTGTCATCATTAGTGTGTTTTACAAACTTGCAACATCTTCATGTGAATAAATGTCATAGACTAACCCATTTGCTGAATCCTTCGGTGGCTACAACGCTTGTGCAACTTGAAGGTTTGACAGTAGAAGAATGCAAAAGGATGAGTAGTGTAATTGAGGAAGGATCAACCGAAGAAGATGGAAATGATGAAATGAAAGATTACGATGATGAACGGTGTCATCCTAAATATCCCAAAGAGATGTTGGTGGAAGATATGAATGTCATGACCAGAGAATATTGGGAGGATAATGTTGATACCGGAATTCCAAATTTATTTGCCGAACAGAGTTTGGAGGAAAACCGATCTGAAAATTCTTCTTCTTCAAAGAATAATGTTGAGAAAGAATAA

Protein sequence

KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHLLNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEMKDYDDERCHPKYPKEMLVEDMNVMTREYWEDNVDTGIPNLFAEQSLEENRSENSSSSKNNVEKE
Homology
BLAST of MELO3C027615 vs. NCBI nr
Match: TYK18357.1 (putative disease resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 147/185 (79.46%), Postives = 154/185 (83.24%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHL 60
            KLKHLWSEECSQNNITSVLQHL SL IS+CGRLSSL+SS+VCFTNL+HL V KC  LTHL
Sbjct: 893  KLKHLWSEECSQNNITSVLQHLISLRISECGRLSSLLSSIVCFTNLKHLRVYKCDGLTHL 952

Query: 61   LNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM-------------------- 120
            LNPSVATTLVQLE LT+EECKRMSSVIE GSTEEDGNDEM                    
Sbjct: 953  LNPSVATTLVQLESLTIEECKRMSSVIEGGSTEEDGNDEMVVFSLGIVSTPRLKYENFSL 1012

Query: 121  -KDYDDERCHPKYPKEMLVEDMNVMTREYWEDNVDTGIPNLFAEQSLEENRSENSSSSKN 165
              DYD ERCHPKYPK+MLVEDMNV+TREYWEDNVDTGIPNLFAEQSLEENRSENSSSSKN
Sbjct: 1013 KNDYDYERCHPKYPKDMLVEDMNVITREYWEDNVDTGIPNLFAEQSLEENRSENSSSSKN 1072

BLAST of MELO3C027615 vs. NCBI nr
Match: AIU36098.1 (vat protein [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 148/228 (64.91%), Postives = 155/228 (67.98%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHL 60
            KLKHLWSEECSQNNITSVLQHL SL IS+CGRLSSL+SS+VCFTNL+HL V KC  LTHL
Sbjct: 1240 KLKHLWSEECSQNNITSVLQHLISLRISECGRLSSLLSSIVCFTNLKHLRVYKCDGLTHL 1299

Query: 61   LNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM-------------------- 120
            LNPSVATTLVQLE LT+EECKRMSSVIE GSTEEDGNDEM                    
Sbjct: 1300 LNPSVATTLVQLESLTIEECKRMSSVIEGGSTEEDGNDEMVVFNNLQHLYIFNCSNLTSF 1359

Query: 121  --------------------------------------------KDYDDERCHPKYPKEM 165
                                                         DYDDERCHPKYPK+M
Sbjct: 1360 YCGRCIIKFPCLRQVDIWNCSEMKVFSLGIVSTPRLKYENFSLKNDYDDERCHPKYPKDM 1419

BLAST of MELO3C027615 vs. NCBI nr
Match: TYK18359.1 (putative disease resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65
Identity = 147/228 (64.47%), Postives = 154/228 (67.54%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHL 60
            KLKHLWSEECSQNNITSVLQHL SL IS+CGRLSSL+SS+VCFTNL+HL V KC  LTHL
Sbjct: 893  KLKHLWSEECSQNNITSVLQHLISLRISECGRLSSLLSSIVCFTNLKHLRVYKCDGLTHL 952

Query: 61   LNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM-------------------- 120
            LNPSVATTLVQLE LT+EECKRMSSVIE GSTEEDGNDEM                    
Sbjct: 953  LNPSVATTLVQLESLTIEECKRMSSVIEGGSTEEDGNDEMVVFNNLQHLYIFNCSNLTSF 1012

Query: 121  --------------------------------------------KDYDDERCHPKYPKEM 165
                                                         DYD ERCHPKYPK+M
Sbjct: 1013 YCGRCIIKFPCLRQVDIWNCSEMKVFSLGIVSTPRLKYENFSLKNDYDYERCHPKYPKDM 1072

BLAST of MELO3C027615 vs. NCBI nr
Match: XP_008455319.2 (PREDICTED: probable disease resistance protein At1g61180 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 2.9e-63
Identity = 144/228 (63.16%), Postives = 151/228 (66.23%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHL 60
            KLKHLWSEECSQNNITSVLQHL  + IS+CG LSSLVSSLVCFTNL+ LHVNKCHRLTHL
Sbjct: 868  KLKHLWSEECSQNNITSVLQHLTDVSISECGGLSSLVSSLVCFTNLKDLHVNKCHRLTHL 927

Query: 61   LNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM-------------------- 120
            LN SVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM                    
Sbjct: 928  LNASVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEMVVFNNLQHLYIFNCSNLTSF 987

Query: 121  --------------------------------------------KDYDDERCHPKYPKEM 165
                                                          YDD +CHPKYPK+M
Sbjct: 988  YCGRCIIKFPCLRQVDIWNCPEMKVFSLGIVSTPRLKYENFSLENYYDDGQCHPKYPKDM 1047

BLAST of MELO3C027615 vs. NCBI nr
Match: AIU36099.1 (vat-like protein [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60
Identity = 143/230 (62.17%), Postives = 151/230 (65.65%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSS--LVSSLVCFTNLQHLHVNKCHRLT 60
            KLKHLWSEECS+NNITSVLQHL  L ISDCGRLSS  LVSSLVCFTNL+ L V KC RLT
Sbjct: 1175 KLKHLWSEECSRNNITSVLQHLIFLRISDCGRLSSLTLVSSLVCFTNLKSLAVYKCDRLT 1234

Query: 61   HLLNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDE------------------- 120
            HLLNPS+ATTLVQL+ LT++ECKRM SVIEEGSTEEDGNDE                   
Sbjct: 1235 HLLNPSMATTLVQLQDLTIKECKRMRSVIEEGSTEEDGNDEMVVFNNLRHLYIFNCSNLT 1294

Query: 121  ---------------------------------------------MKDYDDERCHPKYPK 165
                                                         M DYDD+ CH KYPK
Sbjct: 1295 SFYCGRCIVKFPCLERVFIQNCPEMKVFSLGIVSTPRLKYEKFTLMNDYDDKWCHLKYPK 1354

BLAST of MELO3C027615 vs. ExPASy TrEMBL
Match: A0A5D3D490 (Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00740 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.9e-71
Identity = 147/185 (79.46%), Postives = 154/185 (83.24%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHL 60
            KLKHLWSEECSQNNITSVLQHL SL IS+CGRLSSL+SS+VCFTNL+HL V KC  LTHL
Sbjct: 893  KLKHLWSEECSQNNITSVLQHLISLRISECGRLSSLLSSIVCFTNLKHLRVYKCDGLTHL 952

Query: 61   LNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM-------------------- 120
            LNPSVATTLVQLE LT+EECKRMSSVIE GSTEEDGNDEM                    
Sbjct: 953  LNPSVATTLVQLESLTIEECKRMSSVIEGGSTEEDGNDEMVVFSLGIVSTPRLKYENFSL 1012

Query: 121  -KDYDDERCHPKYPKEMLVEDMNVMTREYWEDNVDTGIPNLFAEQSLEENRSENSSSSKN 165
              DYD ERCHPKYPK+MLVEDMNV+TREYWEDNVDTGIPNLFAEQSLEENRSENSSSSKN
Sbjct: 1013 KNDYDYERCHPKYPKDMLVEDMNVITREYWEDNVDTGIPNLFAEQSLEENRSENSSSSKN 1072

BLAST of MELO3C027615 vs. ExPASy TrEMBL
Match: A0A097NYY2 (Vat protein OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.0e-67
Identity = 148/228 (64.91%), Postives = 155/228 (67.98%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHL 60
            KLKHLWSEECSQNNITSVLQHL SL IS+CGRLSSL+SS+VCFTNL+HL V KC  LTHL
Sbjct: 1240 KLKHLWSEECSQNNITSVLQHLISLRISECGRLSSLLSSIVCFTNLKHLRVYKCDGLTHL 1299

Query: 61   LNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM-------------------- 120
            LNPSVATTLVQLE LT+EECKRMSSVIE GSTEEDGNDEM                    
Sbjct: 1300 LNPSVATTLVQLESLTIEECKRMSSVIEGGSTEEDGNDEMVVFNNLQHLYIFNCSNLTSF 1359

Query: 121  --------------------------------------------KDYDDERCHPKYPKEM 165
                                                         DYDDERCHPKYPK+M
Sbjct: 1360 YCGRCIIKFPCLRQVDIWNCSEMKVFSLGIVSTPRLKYENFSLKNDYDDERCHPKYPKDM 1419

BLAST of MELO3C027615 vs. ExPASy TrEMBL
Match: A0A5D3D479 (Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00780 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.7e-66
Identity = 147/228 (64.47%), Postives = 154/228 (67.54%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHL 60
            KLKHLWSEECSQNNITSVLQHL SL IS+CGRLSSL+SS+VCFTNL+HL V KC  LTHL
Sbjct: 893  KLKHLWSEECSQNNITSVLQHLISLRISECGRLSSLLSSIVCFTNLKHLRVYKCDGLTHL 952

Query: 61   LNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM-------------------- 120
            LNPSVATTLVQLE LT+EECKRMSSVIE GSTEEDGNDEM                    
Sbjct: 953  LNPSVATTLVQLESLTIEECKRMSSVIEGGSTEEDGNDEMVVFNNLQHLYIFNCSNLTSF 1012

Query: 121  --------------------------------------------KDYDDERCHPKYPKEM 165
                                                         DYD ERCHPKYPK+M
Sbjct: 1013 YCGRCIIKFPCLRQVDIWNCSEMKVFSLGIVSTPRLKYENFSLKNDYDYERCHPKYPKDM 1072

BLAST of MELO3C027615 vs. ExPASy TrEMBL
Match: A0A1S3C0S8 (probable disease resistance protein At1g61180 OS=Cucumis melo OX=3656 GN=LOC103495509 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.4e-63
Identity = 144/228 (63.16%), Postives = 151/228 (66.23%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSSLVSSLVCFTNLQHLHVNKCHRLTHL 60
            KLKHLWSEECSQNNITSVLQHL  + IS+CG LSSLVSSLVCFTNL+ LHVNKCHRLTHL
Sbjct: 868  KLKHLWSEECSQNNITSVLQHLTDVSISECGGLSSLVSSLVCFTNLKDLHVNKCHRLTHL 927

Query: 61   LNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM-------------------- 120
            LN SVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEM                    
Sbjct: 928  LNASVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDEMVVFNNLQHLYIFNCSNLTSF 987

Query: 121  --------------------------------------------KDYDDERCHPKYPKEM 165
                                                          YDD +CHPKYPK+M
Sbjct: 988  YCGRCIIKFPCLRQVDIWNCPEMKVFSLGIVSTPRLKYENFSLENYYDDGQCHPKYPKDM 1047

BLAST of MELO3C027615 vs. ExPASy TrEMBL
Match: A0A097NYW9 (Vat-like protein OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.5e-61
Identity = 143/230 (62.17%), Postives = 151/230 (65.65%), Query Frame = 0

Query: 1    KLKHLWSEECSQNNITSVLQHLCSLGISDCGRLSS--LVSSLVCFTNLQHLHVNKCHRLT 60
            KLKHLWSEECS+NNITSVLQHL  L ISDCGRLSS  LVSSLVCFTNL+ L V KC RLT
Sbjct: 1175 KLKHLWSEECSRNNITSVLQHLIFLRISDCGRLSSLTLVSSLVCFTNLKSLAVYKCDRLT 1234

Query: 61   HLLNPSVATTLVQLEGLTVEECKRMSSVIEEGSTEEDGNDE------------------- 120
            HLLNPS+ATTLVQL+ LT++ECKRM SVIEEGSTEEDGNDE                   
Sbjct: 1235 HLLNPSMATTLVQLQDLTIKECKRMRSVIEEGSTEEDGNDEMVVFNNLRHLYIFNCSNLT 1294

Query: 121  ---------------------------------------------MKDYDDERCHPKYPK 165
                                                         M DYDD+ CH KYPK
Sbjct: 1295 SFYCGRCIVKFPCLERVFIQNCPEMKVFSLGIVSTPRLKYEKFTLMNDYDDKWCHLKYPK 1354

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK18357.11.4e-7079.46putative disease resistance protein [Cucumis melo var. makuwa][more]
AIU36098.11.2e-6664.91vat protein [Cucumis melo][more]
TYK18359.11.4e-6564.47putative disease resistance protein [Cucumis melo var. makuwa][more]
XP_008455319.22.9e-6363.16PREDICTED: probable disease resistance protein At1g61180 [Cucumis melo][more]
AIU36099.11.7e-6062.17vat-like protein [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D4906.9e-7179.46Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A097NYY26.0e-6764.91Vat protein OS=Cucumis melo OX=3656 PE=4 SV=1[more]
A0A5D3D4796.7e-6664.47Putative disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3C0S81.4e-6363.16probable disease resistance protein At1g61180 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A097NYW98.5e-6162.17Vat-like protein OS=Cucumis melo OX=3656 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..96
e-value: 2.6E-9
score: 38.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..106
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 13..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027615.1MELO3C027615.1mRNA