MELO3C027594 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027594
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Plant transposase
Location	chr11: 13967053 .. 13968048 (+)
RNA-Seq Expression	MELO3C027594
Synteny	MELO3C027594

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGTAGCTTACATCTTTAATAAAACAGCAGCTTAAAATAGTAGCTAAAAGTTATAGCAGCTTAGATCTTTAAGAATTGTTAAGGTCTGTTTGTTTATATATTGCTAGGAGCGTATTGAACAAACTGAGGCTGAGACGACAGTTTCAACAACAAACGTGGTTGATGATGCTTTAAGTAAAGTTCTTGGCCCCGATCGTGGTCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAACTATCTCTTTTGTCTCACCAAGATCACAAGTATAAGGTTCTTGAAAAAGAATATTTGAAGATGAAGGAAGAAATGGTAGAAATGAAAAAAATGAAAGATGAAATGATCGAAATGAAAGCACTTATGTTATCTTATTTCAAGAAACAGGTATTTCTTTTTTTCTTTTACTAACTTAGATTCTTTTTTTTCTCGTAGTAGTTAACTATATTTTTGGTTTCATATGTGATTATCATAGACTGAACCAAGTGAGGAACTTTCAAATTCTACTGCAAGTGTGCTTAAGCGACTAAATATTCCTCCAATGCCTTCTCCATCGGTAAATTTATTTGTAATAGGATGAAAATTGTTTATGATGTCATTATCTTCTTATTCTAGTATCTCATATTTGTCTTTTCACAGAGTATCAATAACAACAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTGCTATGGTGCATCATATTCCTATTGGTCCACATGCAATTAGAGTATGGATTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATATATTGAAGAAGCTTTGGGAAGTACAGTTGCATGGCCATCTGATAAAGTGATCATTAGTATGTTGTCTAATTCTAATATTTTTTTTCTACATTTTTTAAAGATTTTCTATACTTGTTTAATTAATATATGTTTTACAAATTTATGTAGGTGA

mRNA sequence

ACAGTAGCTTACATCTTTAATAAAACAGCAGCTTAAAATAGTAGCTAAAAGTTATAGCAGCTTAGATCTTTAAGAATTGTTAAGGTCTGTTTGTTTATATATTGCTAGGAGCGTATTGAACAAACTGAGGCTGAGACGACAGTTTCAACAACAAACGTGGTTGATGATGCTTTAAGTAAAGTTCTTGGCCCCGATCGTGGTCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAACTATCTCTTTTGTCTCACCAAGATCACAAGTATAAGGTTCTTGAAAAAGAATATTTGAAGATGAAGGAAGAAATGGTAGAAATGAAAAAAATGAAAGATGAAATGATCGAAATGAAAGCACTTATGTTATCTTATTTCAAGAAACAGACTGAACCAAGTGAGGAACTTTCAAATTCTACTGCAAGTGTGCTTAAGCGACTAAATATTCCTCCAATGCCTTCTCCATCGAGTATCAATAACAACAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTGCTATGGTGCATCATATTCCTATTGGTCCACATGCAATTAGAGTATGGATTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATATATTGAAGAAGCTTTGGGAAGTACAGTTGCATGGCCATCTGATAAAGTGATCATTAGTATGTTGTCTAATTCTAATATTTTTTTTCTACATTTTTTAAAGATTTTCTATACTTGTTTAATTAATATATGTTTTACAAATTTATGTAGGTGA

Coding sequence (CDS)

ATGAAGGAAGAAATGGTAGAAATGAAAAAAATGAAAGATGAAATGATCGAAATGAAAGCACTTATGTTATCTTATTTCAAGAAACAGACTGAACCAAGTGAGGAACTTTCAAATTCTACTGCAAGTGTGCTTAAGCGACTAAATATTCCTCCAATGCCTTCTCCATCGAGTATCAATAACAACAGTCAAACTAAGTGCAAGTTATTAGATTGGTATGGCTCGGGAGAGATTGTTGCTGAAGGAAGATGGTCTTCTAATGATCCAACTGCTATGGTGCATCATATTCCTATTGGTCCACATGCAATTAGAGTATGGATTGATGTAGCAAAGAAACCAAACGCATATTTGTGGAGGCCAACATCAGAAATGACATATATTGAAGAAGCTTTGGGAAGTACAGTTGCATGGCCATCTGATAAAGTGATCATTAGTATGTTGTCTAATTCTAATATTTTTTTTCTACATTTTTTAAAGATTTTCTATACTTGTTTAATTAATATATGTTTTACAAATTTATGTAGGTGA

Protein sequence

MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINNNSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPTSEMTYIEEALGSTVAWPSDKVIISMLSNSNIFFLHFLKIFYTCLINICFTNLCR

Homology

[Close]

BLAST of MELO3C027594 vs. NCBI nr
Match: TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 3.6e-72
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1    MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+TASVLKRLNIPPMPSPSSINN
Sbjct: 1187 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1246

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1247 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1306

Query: 121  SEMTYIEEALGSTVAWPSDKVIIS 145
            SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 1307 SEMTCIEEALGSTVAWPSDKVIIS 1330

[Close]

BLAST of MELO3C027594 vs. NCBI nr
Match: KAA0036985.1 (uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 3.6e-72
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1    MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+TASVLKRLNIPPMPSPSSINN
Sbjct: 1224 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1283

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1284 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1343

Query: 121  SEMTYIEEALGSTVAWPSDKVIIS 145
            SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 1344 SEMTCIEEALGSTVAWPSDKVIIS 1367

[Close]

BLAST of MELO3C027594 vs. NCBI nr
Match: TYK08453.1 (uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 3.6e-72
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1    MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+TASVLKRLNIPPMPSPSSINN
Sbjct: 1252 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1311

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1312 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1371

Query: 121  SEMTYIEEALGSTVAWPSDKVIIS 145
            SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 1372 SEMTCIEEALGSTVAWPSDKVIIS 1395

[Close]

BLAST of MELO3C027594 vs. NCBI nr
Match: TYK25923.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 3.6e-72
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
           MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+TASVLKRLNIPPMPSPSSINN
Sbjct: 183 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 242

Query: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
           NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 243 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 302

Query: 121 SEMTYIEEALGSTVAWPSDKVIIS 145
           SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 303 SEMTCIEEALGSTVAWPSDKVIIS 326

[Close]

BLAST of MELO3C027594 vs. NCBI nr
Match: TYK20615.1 (uncharacterized protein E5676_scaffold132G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 280.4 bits (716), Expect = 1.0e-71
Identity = 139/144 (96.53%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
           MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+T SVLKRLNIPPMPSPSSINN
Sbjct: 1   MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATVSVLKRLNIPPMPSPSSINN 60

Query: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
           NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120

Query: 121 SEMTYIEEALGSTVAWPSDKVIIS 145
           SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 121 SEMTCIEEALGSTVAWPSDKVIIS 144

[Close]

BLAST of MELO3C027594 vs. ExPASy TrEMBL
Match: A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1    MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+TASVLKRLNIPPMPSPSSINN
Sbjct: 1187 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1246

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1247 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1306

Query: 121  SEMTYIEEALGSTVAWPSDKVIIS 145
            SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 1307 SEMTCIEEALGSTVAWPSDKVIIS 1330

[Close]

BLAST of MELO3C027594 vs. ExPASy TrEMBL
Match: A0A5A7T672 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00660 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1    MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+TASVLKRLNIPPMPSPSSINN
Sbjct: 1224 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1283

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1284 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1343

Query: 121  SEMTYIEEALGSTVAWPSDKVIIS 145
            SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 1344 SEMTCIEEALGSTVAWPSDKVIIS 1367

[Close]

BLAST of MELO3C027594 vs. ExPASy TrEMBL
Match: A0A5D3DQI7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00150 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
           MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+TASVLKRLNIPPMPSPSSINN
Sbjct: 183 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 242

Query: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
           NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 243 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 302

Query: 121 SEMTYIEEALGSTVAWPSDKVIIS 145
           SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 303 SEMTCIEEALGSTVAWPSDKVIIS 326

[Close]

BLAST of MELO3C027594 vs. ExPASy TrEMBL
Match: A0A5D3C984 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00690 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1    MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
            MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+TASVLKRLNIPPMPSPSSINN
Sbjct: 1252 MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATASVLKRLNIPPMPSPSSINN 1311

Query: 61   NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
            NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 1312 NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 1371

Query: 121  SEMTYIEEALGSTVAWPSDKVIIS 145
            SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 1372 SEMTCIEEALGSTVAWPSDKVIIS 1395

[Close]

BLAST of MELO3C027594 vs. ExPASy TrEMBL
Match: A0A5D3DAM7 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00420 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.1e-72
Identity = 139/144 (96.53%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MKEEMVEMKKMKDEMIEMKALMLSYFKKQTEPSEELSNSTASVLKRLNIPPMPSPSSINN 60
           MKEEMVEMK MKDEMIEMKALMLSY KKQTEPSEELSN+T SVLKRLNIPPMPSPSSINN
Sbjct: 1   MKEEMVEMKTMKDEMIEMKALMLSYLKKQTEPSEELSNATVSVLKRLNIPPMPSPSSINN 60

Query: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120
           NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT
Sbjct: 61  NSQTKCKLLDWYGSGEIVAEGRWSSNDPTAMVHHIPIGPHAIRVWIDVAKKPNAYLWRPT 120

Query: 121 SEMTYIEEALGSTVAWPSDKVIIS 145
           SEMT IEEALGSTVAWPSDKVIIS
Sbjct: 121 SEMTCIEEALGSTVAWPSDKVIIS 144

The following BLAST results are available for this feature:

BLAST of MELO3C027594 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C027594 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07512.1	3.6e-72	97.22	uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0036985.1	3.6e-72	97.22	uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa]	[more]
TYK08453.1	3.6e-72	97.22	uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa]	[more]
TYK25923.1	3.6e-72	97.22	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK20615.1	1.0e-71	96.53	uncharacterized protein E5676_scaffold132G00420 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C027594 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DCM2	1.7e-72	97.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T672	1.7e-72	97.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DQI7	1.7e-72	97.22	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00...	[more]
A0A5D3C984	1.7e-72	97.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DAM7	5.1e-72	96.53	Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MELO3C027594 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
IPR004264	Transposase, Tnp1/En/Spm-like	PFAM	PF03017	Transposase_23	coord: 68..130 e-value: 2.7E-4 score: 20.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027594.1	MELO3C027594.1	mRNA