MELO3C027593 (gene) Melon (DHL92) v4

Overview
NameMELO3C027593
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionKinesin-like protein KIN12B
Locationchr06: 5381146 .. 5381353 (+)
RNA-Seq ExpressionMELO3C027593
SyntenyMELO3C027593
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGCATCCACCCAAGAAACCCTATCTTGCTAAATACCCATCTCGCCGATCCACTGTCATCTTCTATTCCTAGCGCTAACGGCGCCGGAATCAAGGGCGGAAGACCCCTCGGAAACCTATGTCCTCTTCCAAAGAAAATGCTTCACCGTCAGATCCCAAATTTCCAACTCCATGGTTCCCAATTCCAAACCCTCGCCGACGAAGTTGA

mRNA sequence

GAAGCATCCACCCAAGAAACCCTATCTTGCTAAATACCCATCTCGCCGATCCACTGTCATCTTCTATTCCTAGCGCTAACGGCGCCGGAATCAAGGGCGGAAGACCCCTCGGAAACCTATGTCCTCTTCCAAAGAAAATGCTTCACCGTCAGATCCCAAATTTCCAACTCCATGGTTCCCAATTCCAAACCCTCGCCGACGAAGTTGA

Coding sequence (CDS)

AGCATCCACCCAAGAAACCCTATCTTGCTAAATACCCATCTCGCCGATCCACTGTCATCTTCTATTCCTAGCGCTAACGGCGCCGGAATCAAGGGCGGAAGACCCCTCGGAAACCTATGTCCTCTTCCAAAGAAAATGCTTCACCGTCAGATCCCAAATTTCCAACTCCATGGTTCCCAATTCCAAACCCTCGCCGACGAAGTT

Protein sequence

SIHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIPNFQLHGSQFQTLADEV
Homology
BLAST of MELO3C027593 vs. NCBI nr
Match: TYK05870.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 6.8e-27
Identity = 62/68 (91.18%), Postives = 63/68 (92.65%), Query Frame = 0

Query: 1  SIHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIPNFQLHGSQ 60
          SIHPRNPILLNTHLADPL  SIP ANGAGIKGGRPLGNLC LPKKMLHRQIPN QLHGS+
Sbjct: 3  SIHPRNPILLNTHLADPLPFSIPCANGAGIKGGRPLGNLCRLPKKMLHRQIPNSQLHGSR 62

Query: 61 FQTLADEV 69
          FQTLADEV
Sbjct: 63 FQTLADEV 70

BLAST of MELO3C027593 vs. NCBI nr
Match: KAA0046374.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa] >KAA0046381.1 kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.6e-15
Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 0

Query: 2  IHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIP 53
          +HPRNPILL TH+ADPL SSIPSANGAGIKGGRPLGNL  LPKKMLHR IP
Sbjct: 1  MHPRNPILLYTHVADPLPSSIPSANGAGIKGGRPLGNLRRLPKKMLHRPIP 51

BLAST of MELO3C027593 vs. NCBI nr
Match: KAA0046426.1 (kinesin-like protein KIN12B [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 2.1e-15
Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0

Query: 2  IHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIP 53
          +HPRNPILL TH+ADPL SSIPSANGAGIKGGRPLGNL  LPKKMLHR +P
Sbjct: 1  MHPRNPILLYTHVADPLPSSIPSANGAGIKGGRPLGNLRRLPKKMLHRPVP 51

BLAST of MELO3C027593 vs. NCBI nr
Match: TYK19211.1 (hypothetical protein E5676_scaffold75377G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.0e-14
Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0

Query: 2  IHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIP 53
          +HPRNPILL TH+ADPL SSIPSANGAGIK GRPLGNL  LPKKMLHR IP
Sbjct: 1  MHPRNPILLCTHVADPLPSSIPSANGAGIKSGRPLGNLRRLPKKMLHRPIP 51

BLAST of MELO3C027593 vs. NCBI nr
Match: KAA0067614.1 (pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 7.6e-10
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0

Query: 2  IHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCP 42
          +HPRNPILL TH+ADPL SSIPSANGAGIKGGRPLGN  P
Sbjct: 1  MHPRNPILLYTHVADPLPSSIPSANGAGIKGGRPLGNPAP 40

BLAST of MELO3C027593 vs. ExPASy TrEMBL
Match: A0A5D3C3G4 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00260 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27
Identity = 62/68 (91.18%), Postives = 63/68 (92.65%), Query Frame = 0

Query: 1  SIHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIPNFQLHGSQ 60
          SIHPRNPILLNTHLADPL  SIP ANGAGIKGGRPLGNLC LPKKMLHRQIPN QLHGS+
Sbjct: 3  SIHPRNPILLNTHLADPLPFSIPCANGAGIKGGRPLGNLCRLPKKMLHRQIPNSQLHGSR 62

Query: 61 FQTLADEV 69
          FQTLADEV
Sbjct: 63 FQTLADEV 70

BLAST of MELO3C027593 vs. ExPASy TrEMBL
Match: A0A5A7TTI5 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001120 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.7e-16
Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 0

Query: 2  IHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIP 53
          +HPRNPILL TH+ADPL SSIPSANGAGIKGGRPLGNL  LPKKMLHR IP
Sbjct: 1  MHPRNPILLYTHVADPLPSSIPSANGAGIKGGRPLGNLRRLPKKMLHRPIP 51

BLAST of MELO3C027593 vs. ExPASy TrEMBL
Match: A0A5A7TWJ0 (Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001820 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0

Query: 2  IHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIP 53
          +HPRNPILL TH+ADPL SSIPSANGAGIKGGRPLGNL  LPKKMLHR +P
Sbjct: 1  MHPRNPILLYTHVADPLPSSIPSANGAGIKGGRPLGNLRRLPKKMLHRPVP 51

BLAST of MELO3C027593 vs. ExPASy TrEMBL
Match: A0A5D3D6M1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75377G00020 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.0e-15
Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0

Query: 2  IHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCPLPKKMLHRQIP 53
          +HPRNPILL TH+ADPL SSIPSANGAGIK GRPLGNL  LPKKMLHR IP
Sbjct: 1  MHPRNPILLCTHVADPLPSSIPSANGAGIKSGRPLGNLRRLPKKMLHRPIP 51

BLAST of MELO3C027593 vs. ExPASy TrEMBL
Match: A0A5A7VJS4 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00820 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.7e-10
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0

Query: 2  IHPRNPILLNTHLADPLSSSIPSANGAGIKGGRPLGNLCP 42
          +HPRNPILL TH+ADPL SSIPSANGAGIKGGRPLGN  P
Sbjct: 1  MHPRNPILLYTHVADPLPSSIPSANGAGIKGGRPLGNPAP 40

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK05870.16.8e-2791.18kinesin-like protein KIN12B [Cucumis melo var. makuwa][more]
KAA0046374.11.6e-1586.27kinesin-like protein KIN12B [Cucumis melo var. makuwa] >KAA0046381.1 kinesin-lik... [more]
KAA0046426.12.1e-1584.31kinesin-like protein KIN12B [Cucumis melo var. makuwa][more]
TYK19211.11.0e-1484.31hypothetical protein E5676_scaffold75377G00020 [Cucumis melo var. makuwa][more]
KAA0067614.17.6e-1085.00pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C3G43.3e-2791.18Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7TTI57.7e-1686.27Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7TWJ01.0e-1584.31Kinesin-like protein KIN12B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3D6M15.0e-1584.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VJS43.7e-1085.00Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G0082... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027593.1MELO3C027593.1mRNA