MELO3C027559 (gene) Melon (DHL92) v4

Overview
NameMELO3C027559
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr03: 13081301 .. 13081473 (-)
RNA-Seq ExpressionMELO3C027559
SyntenyMELO3C027559
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGAATTACCTGAACGATGGCAGAGATTGGATTGAGAGAGACGACGTCGGCGGCCGGAAATCAGATGCGAGCGGGGGATGGTGGAGGGAGAAAATGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGCGAAAATGGCTGAAGTCGATCGGTT

mRNA sequence

ACGGAATTACCTGAACGATGGCAGAGATTGGATTGAGAGAGACGACGTCGGCGGCCGGAAATCAGATGCGAGCGGGGGATGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGCGAAAATGGCTGAAGTCGATCGGTT

Coding sequence (CDS)

ATGGCAGAGATTGGATTGAGAGAGACGACGTCGGCGGCCGGAAATCAGATGCGAGCGGGGGATGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGCGAAAATGGCTGAAGTCGATCGG

Protein sequence

MAEIGLRETTSAAGNQMRAGDGGGRKRRRWWKAKMAEVDR
Homology
[Close]
BLAST of MELO3C027559 vs. NCBI nr
Match: KAA0058345.1 (hypothetical protein E6C27_scaffold409G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-04
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 1  MAEIGLRETTSAAGNQMRAGDGGGRKRRR---WWKAKM 36
          MAEIGLRETTSAA NQ+RA DGGGRKR+R   WW+ KM
Sbjct: 1  MAEIGLRETTSAAENQIRAVDGGGRKRQRSIGWWREKM 38

[Close]
BLAST of MELO3C027559 vs. ExPASy TrEMBL
Match: A0A5A7UXJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G00310 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.0e-05
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 1  MAEIGLRETTSAAGNQMRAGDGGGRKRRR---WWKAKM 36
          MAEIGLRETTSAA NQ+RA DGGGRKR+R   WW+ KM
Sbjct: 1  MAEIGLRETTSAAENQIRAVDGGGRKRQRSIGWWREKM 38

The following BLAST results are available for this feature:
BLAST of MELO3C027559 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058345.11.6e-0476.32hypothetical protein E6C27_scaffold409G00310 [Cucumis melo var. makuwa][more]
BLAST of MELO3C027559 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C027559 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UXJ58.0e-0576.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C027559 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..40

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027559.1MELO3C027559.1mRNA