MELO3C027558 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027558
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr11: 6181964 .. 6182194 (-)
RNA-Seq Expression	MELO3C027558
Synteny	MELO3C027558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACGACGGAATTACCTGAACGATGGCAGAGATTGGATTGAGAGAGACGACGTCGGCGGCCGGAAATCAGATGCAAGCAATGGATGGTGGAGGGAGAAAATGGCAACGATCGATCGGGTGGTGGAGGGAGAAAACGGCGACGATGGTGGAAGGAGAAAACGGCTGAGGTCGATCAGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGGTGGAGGGAGAGAACGGC

mRNA sequence

ATTGACGACGGAATTACCTGAACGATGGCAGAGATTGGATTGAGAGAGACGACGTCGGCGGCCGGAAATCAGATGCAAGCAATGGATGGTGGAGGGAGAAAACGGCAACGATGGTGGATGGTGGAGGGAGAGAACGGC

Coding sequence (CDS)

ATGGCAGAGATTGGATTGAGAGAGACGACGTCGGCGGCCGGAAATCAGATGCAAGCAATGGATGGTGGAGGGAGAAAACGGCAACGATGGTGGATGGTGGAGGGAGAGAACGGC

Protein sequence

MAEIGLRETTSAAGNQMQAMDGGGRKRQRWWMVEGENG

Homology

[Close]

BLAST of MELO3C027558 vs. NCBI nr
Match: KAA0058345.1 (hypothetical protein E6C27_scaffold409G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 4.5e-04
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 1  MAEIGLRETTSAAGNQMQAMDGGGRKRQR---WW 32
          MAEIGLRETTSAA NQ++A+DGGGRKRQR   WW
Sbjct: 1  MAEIGLRETTSAAENQIRAVDGGGRKRQRSIGWW 34

[Close]

BLAST of MELO3C027558 vs. ExPASy TrEMBL
Match: A0A5A7UXJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G00310 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-04
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 1  MAEIGLRETTSAAGNQMQAMDGGGRKRQR---WW 32
          MAEIGLRETTSAA NQ++A+DGGGRKRQR   WW
Sbjct: 1  MAEIGLRETTSAAENQIRAVDGGGRKRQRSIGWW 34

The following BLAST results are available for this feature:

BLAST of MELO3C027558 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058345.1	4.5e-04	79.41	hypothetical protein E6C27_scaffold409G00310 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C027558 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXJ5	2.2e-04	79.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C027558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027558.1	MELO3C027558.1	mRNA