MELO3C027502.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C027502.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Membrane-associated 30 kDa protein
Location	chr08: 15912031 .. 15912487 (+)
RNA-Seq Expression	MELO3C027502.jh1
Synteny	MELO3C027502.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAACCCAAATCTTCTCCAATCTAACCTCAATCCTAGACTGCATTATGAAGTTTCAAAAGATTGCTGCCCTACTGATTGTTTGTGTTGTGTTTGGCATTGTCTTTAGCCATATAGATATTGGTACAGTTGATGCAGCCCGAATGCTCTTTGAGACTTTACGTGATGATCATGATGTTGATTGTGTTGATCCATATTCGATAGATCATCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGGGTCTGGACCGAGTCTTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACACGTCCGCTAGATGTGTCATTTTTGGGTTTCGTAGATCAACTATGAATGAAGTTATAAATGAAGTGTAATTGTAGAAGCAACTAAGGATGGAGTTAGGATAAAATGTAATACCTAACTAATTAAATATAATCATAATAAACGAAACCCTTCTTT

mRNA sequence

CTAAAACCCAAATCTTCTCCAATCTAACCTCAATCCTAGACTGCATTATGAAGTTTCAAAAGATTGCTGCCCTACTGATTGTTTGTGTTGTGTTTGGCATTGTCTTTAGCCATATAGATATTGGTACAGTTGATGCAGCCCGAATGCTCTTTGAGACTTTACGTGATGATCATGATGTTGATTGTGTTGATCCATATTCGATAGATCATCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGGGTCTGGACCGAGTCTTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACACGTCCGCTAGATGTGTCATTTTTGGGTTTCGTAGATCAACTATGAATGAAGTTATAAATGAAGTGTAATTGTAGAAGCAACTAAGGATGGAGTTAGGATAAAATGTAATACCTAACTAATTAAATATAATCATAATAAACGAAACCCTTCTTT

Coding sequence (CDS)

ATGAAGTTTCAAAAGATTGCTGCCCTACTGATTGTTTGTGTTGTGTTTGGCATTGTCTTTAGCCATATAGATATTGGTACAGTTGATGCAGCCCGAATGCTCTTTGAGACTTTACGTGATGATCATGATGTTGATTGTGTTGATCCATATTCGATAGATCATCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGGGTCTGGACCGAGTCTTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACACGTCCGCTAG

Protein sequence

MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDSVKCWLENLGSGPSLKGPGHGTRPPAHVR

Homology

[Close]

BLAST of MELO3C027502.jh1 vs. NCBI nr
Match: KAA0043550.1 (hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (462), Expect = 6.28e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60
          MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60

Query: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88
          VKCWLENLGSGPSLKGPGHGTRPPAHVR
Sbjct: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88

[Close]

BLAST of MELO3C027502.jh1 vs. NCBI nr
Match: KAA0043548.1 (hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (403), Expect = 5.96e-49
Identity = 79/88 (89.77%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60
          MKFQKIAALLI+CVVFGIVFSHI  GTVDAARML ETLRDDHDVDC+D YSIDHHKAKDS
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHI--GTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDS 60

Query: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88
          VKCWLENL SGPS KGPGHGTRPPAH R
Sbjct: 61 VKCWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of MELO3C027502.jh1 vs. NCBI nr
Match: TYK02483.1 (hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (400), Expect = 1.71e-48
Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60
          MKFQKIAALLI+C+VFGIVFSHI  GTVDAARML ETLRDDHDVDC+D YSIDHHKAKDS
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHI--GTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDS 60

Query: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88
          VKCWLENL SGPS KGPGHGTRPPAH R
Sbjct: 61 VKCWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of MELO3C027502.jh1 vs. NCBI nr
Match: KAG7018440.1 (hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.7 bits (221), Expect = 3.21e-21
Identity = 48/79 (60.76%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60
          MKFQKI +  IVCVVFGI+ S I   T+DAAR+L ET   +H VD +DPYSI + KAK++
Sbjct: 11 MKFQKIRSFFIVCVVFGIILSQI--STIDAARVLSET--SNHGVDYIDPYSIVYQKAKET 70

Query: 61 VKCWLENLGSGPSLKGPGH 79
          V CWL  L SGPS  GPGH
Sbjct: 71 VSCWLGKLSSGPSPSGPGH 85

[Close]

BLAST of MELO3C027502.jh1 vs. NCBI nr
Match: KGN53025.1 (hypothetical protein Csa_015299 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 2.42e-20
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLF-ETLRDDHD--VDC-VDPYSIDHHK 60
          MKFQKI  LLIVCV+ G+V S I++   DAAR+L  ET RDDHD  VD  +DPYSI + K
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVA--DAARILLSETPRDDHDHGVDYHIDPYSIVYQK 61

Query: 61 AKDSVKCWLENLGSGPSLKGPGH 79
          AK+S+ CWL  L SGPS  GPGH
Sbjct: 62 AKESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of MELO3C027502.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TJV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00490 PE=4 SV=1)

HSP 1 Score: 182 bits (462), Expect = 3.04e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60
          MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60

Query: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88
          VKCWLENLGSGPSLKGPGHGTRPPAHVR
Sbjct: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88

[Close]

BLAST of MELO3C027502.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TL44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00460 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 2.88e-49
Identity = 79/88 (89.77%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60
          MKFQKIAALLI+CVVFGIVFSHI  GTVDAARML ETLRDDHDVDC+D YSIDHHKAKDS
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHI--GTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDS 60

Query: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88
          VKCWLENL SGPS KGPGHGTRPPAH R
Sbjct: 61 VKCWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of MELO3C027502.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BS33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00050 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 8.28e-49
Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60
          MKFQKIAALLI+C+VFGIVFSHI  GTVDAARML ETLRDDHDVDC+D YSIDHHKAKDS
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHI--GTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDS 60

Query: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88
          VKCWLENL SGPS KGPGHGTRPPAH R
Sbjct: 61 VKCWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of MELO3C027502.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KTV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.17e-20
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLF-ETLRDDHD--VDC-VDPYSIDHHK 60
          MKFQKI  LLIVCV+ G+V S I++   DAAR+L  ET RDDHD  VD  +DPYSI + K
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVA--DAARILLSETPRDDHDHGVDYHIDPYSIVYQK 61

Query: 61 AKDSVKCWLENLGSGPSLKGPGH 79
          AK+S+ CWL  L SGPS  GPGH
Sbjct: 62 AKESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of MELO3C027502.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L125 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 8.26e-19
Identity = 53/90 (58.89%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDD----HDVDC-VDPYSIDHH 60
          MKFQ I+ LLIVCVVFGIVFSH   G VDA R+L  +        H      DPY+    
Sbjct: 1  MKFQNISTLLIVCVVFGIVFSHT--GVVDATRVLLGSGPSPGGPGHGTKPPADPYTF--- 60

Query: 61 KAKDSVKCWLENLGSGPSLKGPGHGTRPPA 85
          KAK+ VK WLENLGSGPS  GPGHGT+PPA
Sbjct: 61 KAKERVKPWLENLGSGPSPGGPGHGTKPPA 85

The following BLAST results are available for this feature:

BLAST of MELO3C027502.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043550.1	6.28e-58	100.00	hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa]	[more]
KAA0043548.1	5.96e-49	89.77	hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa]	[more]
TYK02483.1	1.71e-48	88.64	hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa]	[more]
KAG7018440.1	3.21e-21	60.76	hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN53025.1	2.42e-20	61.45	hypothetical protein Csa_015299 [Cucumis sativus]	[more]

BLAST of MELO3C027502.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027502.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJV8	3.04e-58	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TL44	2.88e-49	89.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BS33	8.28e-49	88.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KTV4	1.17e-20	61.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1	[more]
A0A0A0L125	8.26e-19	58.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1	[more]

BLAST of MELO3C027502.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..88
None	No IPR available	PANTHER	PTHR37245:SF4	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..79
IPR040273	PAMP-induced secreted peptide 1	PANTHER	PTHR37245	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027502.jh1.t1	MELO3C027502.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response