Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATTAAGATAAGTTAGAAAAGAATCTTGAGGCATTAGATAAGGAGATGAGACGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAATAGTGGAGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCAAGCTTGTCAATGATTTGAATACATCAATTGAAAAATGGAAAACACAGATAATGGATTTGAAAGCACATAATCATTCTTTGTGTCAAACTATTGATAGCCTACATTTGAAGATGGTTGAGCGCTCTGAAGAGTATGAAATACTGAAAAATTATGTCGATTCCTTACAGTATCAACTTACTGCATTTTCAAATTCAAGTGAGAGGATAGTGCAGGAATATGAGTCATTGAAGACGAATTACATGCAAAAGAAGGTTGATTATGATATGCATTATGATATGCAAATGAGAGATTTTCAAGTGCTAGTGGAATGTGTAAATCAGTCGATTGAAATTCTCAGAATGGCATCCAGAAGAGTAAATGGTTTTGTAGAATGGAAGCTGATTTGAGGGTTAATTTTTTCTCAATGCAACCTCATGTAGATGATCTGAATAGATTCTTGAGGATGATATGTAGAGAACTCGGACATTTTGGTCGTTTTCATTAA
mRNA sequence
AAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATTAAGATAAGTTAGAAAAGAATCTTGAGGCATTAGATAAGGAGATGAGACGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAATAGTGGAGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCAAGCTTGTCAATGATTTGAATACATCAATTGAAAAATGGAAAACACAGATAATGGATTTGAAAGCACATAATCATTCTTTGTGTCAAACTATTGATAGCCTACATTTGAAGATGGTTGAGCGCTCTGAAGAGTATGAAATACTGAAAAATTATGTCGATTCCTTACAGTATCAACTTACTGCATTTTCAAATTCAAGTGAGAGGATAGTGCAGGAATATGAGTCATTGAAGACGAATTACGATATGCATTATGATATGCAAATGAGAGATTTTCAAGTGCTAGTGGAATGTGTAAATCAGTCGATTGAAATTCTCAGAATGGCATCCAGAAGAGTAAATGGTTTTGTAGAATGGAAGCTGATTTGAGGGTTAATTTTTTCTCAATGCAACCTCATGTAGATGATCTGAATAGATTCTTGAGGATGATATGTAGAGAACTCGGACATTTTGGTCGTTTTCATTAA
Coding sequence (CDS)
ATGAGACGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAATAGTGGAGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGGAAGGAATATTTTCTCAAGCTTGTCAATGATTTGAATACATCAATTGAAAAATGGAAAACACAGATAATGGATTTGAAAGCACATAATCATTCTTTGTGTCAAACTATTGATAGCCTACATTTGAAGATGGTTGAGCGCTCTGAAGAGTATGAAATACTGAAAAATTATGTCGATTCCTTACAGTATCAACTTACTGCATTTTCAAATTCAAGTGAGAGGATAGTGCAGGAATATGAGTCATTGAAGACGAATTACGATATGCATTATGATATGCAAATGAGAGATTTTCAAGTGCTAGTGGAATGTGTAAATCAGTCGATTGAAATTCTCAGAATGGCATCCAGAAGAGTAAATGGTTTTGTAGAATGGAAGCTGATTTGA
Protein sequence
MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDLKAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNYDMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEWKLI
Homology
BLAST of MELO3C027463 vs. NCBI nr
Match:
TYK23632.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58
Identity = 125/161 (77.64%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANR LKNEKTTLQA V SQDEYIKDLE+GKEYFL+LVNDLNTSI K +TQIMDL
Sbjct: 129 MRRMNKANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDL 188
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QT+DSLHLKM ERSEEYEILKNYVDSL YQLTA NSS+RI QEYESL T+Y
Sbjct: 189 EAQNHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDY 248
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEW 159
+ YD+Q RDFQVLVE V+Q+IE LRM S+R NGF EW
Sbjct: 249 VQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 289
BLAST of MELO3C027463 vs. NCBI nr
Match:
TYK18656.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 235.7 bits (600), Expect = 2.7e-58
Identity = 124/161 (77.02%), Postives = 138/161 (85.71%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANRSLKNEKTTLQA V S+DEYIKDLE+GKEYFL+LVNDLNTSI K +TQIMDL
Sbjct: 177 MRRMNKANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDL 236
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QT+D+LHLKM ERSEEYEILKNYVDSL YQLTA NSS+RI QEYESL T+Y
Sbjct: 237 EAQNHSLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDY 296
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEW 159
+ YD+Q RDFQVLVE V+Q+IE LRM S+R NGF EW
Sbjct: 297 VQMKVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEW 337
BLAST of MELO3C027463 vs. NCBI nr
Match:
KAA0037780.1 (girdin-like [Cucumis melo var. makuwa] >TYK27303.1 girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 234.2 bits (596), Expect = 8.0e-58
Identity = 124/161 (77.02%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANRSLKNEKTTLQA V SQDEYIKDLE+GKEYFL+LVNDLNTSI K +TQIMDL
Sbjct: 136 MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIVKRETQIMDL 195
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QTID+LHLKM ERSEEYEILKNY DSL +QLTA NSS+RI QEYESL T+Y
Sbjct: 196 EAQNHSLRQTIDNLHLKMAERSEEYEILKNYADSLHFQLTAHQNSSKRITQEYESLNTDY 255
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEW 159
+ YD+Q RDFQVLVE V+Q+IE LRM S+R NGF EW
Sbjct: 256 VQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 296
BLAST of MELO3C027463 vs. NCBI nr
Match:
KAA0062685.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 229.2 bits (583), Expect = 2.6e-56
Identity = 122/161 (75.78%), Postives = 135/161 (83.85%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANRSLKNEKTTLQA V SQ+EYIKDLE+GKEYFL+ VNDLNTSI K +TQIMDL
Sbjct: 152 MRRMNKANRSLKNEKTTLQATVGSQNEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDL 211
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QT+DSLHLKM E SEEYEILKNYV+SL YQLTA NSS RI QEYESL T+Y
Sbjct: 212 EAQNHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLNTDY 271
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEW 159
+ YD+Q RDFQVLVE V+Q+IE LRM S+R NGF EW
Sbjct: 272 VQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 312
BLAST of MELO3C027463 vs. NCBI nr
Match:
KAA0036949.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 228.8 bits (582), Expect = 3.3e-56
Identity = 122/160 (76.25%), Postives = 134/160 (83.75%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANRSLKNEKTT QA + SQDEYIKDLE+GKEYFLKLVNDLNTSI K +T+IMDL
Sbjct: 421 MRRMNKANRSLKNEKTTFQATMGSQDEYIKDLENGKEYFLKLVNDLNTSIRKRETKIMDL 480
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QT+DSLHLKMVE SEEYEILKNY DSL YQLTA NSS+RI QEYESL T+Y
Sbjct: 481 EAQNHSLRQTVDSLHLKMVEHSEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDY 540
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVE 158
+ YDMQ RDFQVLVE V+Q+IE LRM S+R N F E
Sbjct: 541 VQMKVDYDMQTRDFQVLVERVDQTIEFLRMVSKRANDFAE 580
BLAST of MELO3C027463 vs. ExPASy TrEMBL
Match:
A0A5D3DJ95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 PE=4 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 7.8e-59
Identity = 125/161 (77.64%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANR LKNEKTTLQA V SQDEYIKDLE+GKEYFL+LVNDLNTSI K +TQIMDL
Sbjct: 129 MRRMNKANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDL 188
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QT+DSLHLKM ERSEEYEILKNYVDSL YQLTA NSS+RI QEYESL T+Y
Sbjct: 189 EAQNHSLHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDY 248
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEW 159
+ YD+Q RDFQVLVE V+Q+IE LRM S+R NGF EW
Sbjct: 249 VQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 289
BLAST of MELO3C027463 vs. ExPASy TrEMBL
Match:
A0A5D3D533 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE=4 SV=1)
HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 124/161 (77.02%), Postives = 138/161 (85.71%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANRSLKNEKTTLQA V S+DEYIKDLE+GKEYFL+LVNDLNTSI K +TQIMDL
Sbjct: 177 MRRMNKANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDL 236
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QT+D+LHLKM ERSEEYEILKNYVDSL YQLTA NSS+RI QEYESL T+Y
Sbjct: 237 EAQNHSLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDY 296
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEW 159
+ YD+Q RDFQVLVE V+Q+IE LRM S+R NGF EW
Sbjct: 297 VQMKVDYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEW 337
BLAST of MELO3C027463 vs. ExPASy TrEMBL
Match:
A0A5D3DUG2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00160 PE=4 SV=1)
HSP 1 Score: 234.2 bits (596), Expect = 3.9e-58
Identity = 124/161 (77.02%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANRSLKNEKTTLQA V SQDEYIKDLE+GKEYFL+LVNDLNTSI K +TQIMDL
Sbjct: 136 MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIVKRETQIMDL 195
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QTID+LHLKM ERSEEYEILKNY DSL +QLTA NSS+RI QEYESL T+Y
Sbjct: 196 EAQNHSLRQTIDNLHLKMAERSEEYEILKNYADSLHFQLTAHQNSSKRITQEYESLNTDY 255
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEW 159
+ YD+Q RDFQVLVE V+Q+IE LRM S+R NGF EW
Sbjct: 256 VQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 296
BLAST of MELO3C027463 vs. ExPASy TrEMBL
Match:
A0A5A7V9X6 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 PE=4 SV=1)
HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 122/161 (75.78%), Postives = 135/161 (83.85%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANRSLKNEKTTLQA V SQ+EYIKDLE+GKEYFL+ VNDLNTSI K +TQIMDL
Sbjct: 152 MRRMNKANRSLKNEKTTLQATVGSQNEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDL 211
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QT+DSLHLKM E SEEYEILKNYV+SL YQLTA NSS RI QEYESL T+Y
Sbjct: 212 EAQNHSLRQTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLNTDY 271
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVEW 159
+ YD+Q RDFQVLVE V+Q+IE LRM S+R NGF EW
Sbjct: 272 VQMKVDYDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEW 312
BLAST of MELO3C027463 vs. ExPASy TrEMBL
Match:
A0A5A7T6E2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=4 SV=1)
HSP 1 Score: 228.8 bits (582), Expect = 1.6e-56
Identity = 122/160 (76.25%), Postives = 134/160 (83.75%), Query Frame = 0
Query: 1 MRRMNKANRSLKNEKTTLQAIVESQDEYIKDLESGKEYFLKLVNDLNTSIEKWKTQIMDL 60
MRRMNKANRSLKNEKTT QA + SQDEYIKDLE+GKEYFLKLVNDLNTSI K +T+IMDL
Sbjct: 421 MRRMNKANRSLKNEKTTFQATMGSQDEYIKDLENGKEYFLKLVNDLNTSIRKRETKIMDL 480
Query: 61 KAHNHSLCQTIDSLHLKMVERSEEYEILKNYVDSLQYQLTAFSNSSERIVQEYESLKTNY 120
+A NHSL QT+DSLHLKMVE SEEYEILKNY DSL YQLTA NSS+RI QEYESL T+Y
Sbjct: 481 EAQNHSLRQTVDSLHLKMVEHSEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDY 540
Query: 121 ---DMHYDMQMRDFQVLVECVNQSIEILRMASRRVNGFVE 158
+ YDMQ RDFQVLVE V+Q+IE LRM S+R N F E
Sbjct: 541 VQMKVDYDMQTRDFQVLVERVDQTIEFLRMVSKRANDFAE 580
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DJ95 | 7.8e-59 | 77.64 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 P... | [more] |
| A0A5D3D533 | 1.3e-58 | 77.02 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE... | [more] |
| A0A5D3DUG2 | 3.9e-58 | 77.02 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00160 P... | [more] |
| A0A5A7V9X6 | 1.2e-56 | 75.78 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 P... | [more] |
| A0A5A7T6E2 | 1.6e-56 | 76.25 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
