MELO3C027431 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCAACAACTCAGTTTTCGTATCGCGGGGTAAAGAGTGATCCTGCGAAGGTTTCTTTGTTTTGTATTGGTCATAAGTGCTTCCAGCTTCGAGACTCATACTCCGATGACTTCAGTTTACATTCCTGGCATTGTCCATCACTCGTTTTCCCAAGGTATAGGTTGGAAAGCGAGCTCGTTGGAGGGAGGACTAAGGTGCAACACAAAACGATAGACAAGATGGCCAAGCTCCACCAACGAGTGGCGAACGCTCGTCCGGTGTTAGAGACCACTAA ATTTCAACAACTCAGTTTTCGTATCGCGGGGTAAAGAGTGATCCTGCGAAGGTTTCTTTGTTTTGTATTGGTCATAAGTGCTTCCAGCTTCGAGACTCATACTCCGATGACTTCAGTTTACATTCCTGGCATTGTCCATCACTCGTTTTCCCAAGGTATAGGTTGGAAAGCGAGCTCGTTGGAGGGAGGACTAAGGTGCAACACAAAACGATAGACAAGATGGCCAAGCTCCACCAACGAGTGGCGAACGCTCGTCCGGTGTTAGAGACCACTAA ATTTCAACAACTCAGTTTTCGTATCGCGGGGTAAAGAGTGATCCTGCGAAGGTTTCTTTGTTTTGTATTGGTCATAAGTGCTTCCAGCTTCGAGACTCATACTCCGATGACTTCAGTTTACATTCCTGGCATTGTCCATCACTCGTTTTCCCAAGGTATAGGTTGGAAAGCGAGCTCGTTGGAGGGAGGACTAAGGTGCAACACAAAACGATAGACAAGATGGCCAAGCTCCACCAACGAGTGGCGAACGCTCGTCCGGTGTTAGAGACCACT ISTTQFSYRGVKSDPAKVSLFCIGHKCFQLRDSYSDDFSLHSWHCPSLVFPRYRLESELVGGRTKVQHKTIDKMAKLHQRVANARPVLETT Homology
BLAST of MELO3C027431 vs. NCBI nr
Match: KAA0065520.1 (retrotransposon protein, putative, Ty3-gypsy subclass, expressed [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of MELO3C027431 vs. NCBI nr
Match: KAA0051945.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12215.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 77.4 bits (189), Expect = 7.0e-11 Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of MELO3C027431 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 6.2e-07 Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of MELO3C027431 vs. NCBI nr
Match: KAA0047409.1 (retrotransposon protein, putative, Ty3-gypsy sub-class [Cucumis melo var. makuwa] >TYK14084.1 retrotransposon protein, putative, Ty3-gypsy sub-class [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
BLAST of MELO3C027431 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 5.8e-05 Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of MELO3C027431 vs. ExPASy TrEMBL
Match: A0A5A7VEB1 (Retrotransposon protein, putative, Ty3-gypsy subclass, expressed OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00210 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.6e-14 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of MELO3C027431 vs. ExPASy TrEMBL
Match: A0A5D3CKZ2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00020 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11 Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of MELO3C027431 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.0e-07 Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of MELO3C027431 vs. ExPASy TrEMBL
Match: A0A5A7U1Q6 (Retrotransposon protein, putative, Ty3-gypsy sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00650 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.7e-07 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
BLAST of MELO3C027431 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.8e-05 Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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