MELO3C027285 (gene) Melon (DHL92) v4

Overview
NameMELO3C027285
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr03: 5143867 .. 5144259 (-)
RNA-Seq ExpressionMELO3C027285
SyntenyMELO3C027285
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAGTAGAGATGAGATTTACCGGGAAGGAAGGTCGGAATCGTCGCGGGTAGGAGTCTGCTGCATGGGTCGTCACGGAATGGGTTGTCGCGGAATGGGTCGTCGTGACGTGGGTCGTTCGGAACAGATTGCGACGTGGGTTGTCCGGAACAGATCACGGTGTGGGTCGTGCGGAATGAATCGTTTGGAACAGATTGCGGCATCGTCCAGCGTGGGTCGTCGCGGAATGGGTCATCCGGCGTTGGGTCTTCGCGACGTCGACGTGGGTCGTCGACGTGGGTCTTCGCGCGTCGAGTGGGTCTTTGCGCGGCGTGGTGTGGGTCTTCGCGGCGTCGACTCGGTCTTCGCGGCGTGTCGACGTGGCTCTTCGCAGCAGTCGTCGGCGTCTTAG

mRNA sequence

ATGTATAGTAGAGATGAGATTTACCGGGAAGGAAGGTCGGAATCGTCGCGGGTAGGAGTCTGCTGCATGGGTCGTCACGGAATGGGTTGTCGCGGAATGGGTCGTCGTGACGTGGGTCGTTCGGAACAGATTGCGACGTGGGTTGTCCGGAACAGATCACGGTGTGGGTCGTGCGGAATGAATCGTTTGGAACAGATTGCGGCATCGTCCAGCGTGGGTCGTCGCGGAATGGGTCATCCGGCGTTGGGTCTTCGCGACGTCGACGTGGGTCGTCGACGTGGGTCTTCGCGCGTCGAGTGGGTCTTTGCGCGGCGTGGTGTGGGTCTTCGCGGCGTCGACTCGGTCTTCGCGGCGTGTCGACGTGGCTCTTCGCAGCAGTCGTCGGCGTCTTAG

Coding sequence (CDS)

ATGTATAGTAGAGATGAGATTTACCGGGAAGGAAGGTCGGAATCGTCGCGGGTAGGAGTCTGCTGCATGGGTCGTCACGGAATGGGTTGTCGCGGAATGGGTCGTCGTGACGTGGGTCGTTCGGAACAGATTGCGACGTGGGTTGTCCGGAACAGATCACGGTGTGGGTCGTGCGGAATGAATCGTTTGGAACAGATTGCGGCATCGTCCAGCGTGGGTCGTCGCGGAATGGGTCATCCGGCGTTGGGTCTTCGCGACGTCGACGTGGGTCGTCGACGTGGGTCTTCGCGCGTCGAGTGGGTCTTTGCGCGGCGTGGTGTGGGTCTTCGCGGCGTCGACTCGGTCTTCGCGGCGTGTCGACGTGGCTCTTCGCAGCAGTCGTCGGCGTCTTAG

Protein sequence

MYSRDEIYREGRSESSRVGVCCMGRHGMGCRGMGRRDVGRSEQIATWVVRNRSRCGSCGMNRLEQIAASSSVGRRGMGHPALGLRDVDVGRRRGSSRVEWVFARRGVGLRGVDSVFAACRRGSSQQSSAS
Homology
[Close]
BLAST of MELO3C027285 vs. NCBI nr
Match: TYK02534.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 5.2e-07
Identity = 34/61 (55.74%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 1  MYSRDEIYREGRSESSRVGVCCMGRHGM-------------------GCRGMGRRDVGRS 43
          MY RDEIY++GRSESSRVGVCC+GR GM                   GCRGMGRR VG +
Sbjct: 1  MYRRDEIYQQGRSESSRVGVCCVGRRGMGGCGVGGHGTCRDVGGHDVGCRGMGRRGVGLA 60

[Close]
BLAST of MELO3C027285 vs. NCBI nr
Match: KAA0059154.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 5.2e-07
Identity = 34/61 (55.74%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 1  MYSRDEIYREGRSESSRVGVCCMGRHGM-------------------GCRGMGRRDVGRS 43
          MY RDEIY++GRSESSRVGVCC+GR GM                   GCRGMGRR VG +
Sbjct: 1  MYRRDEIYQQGRSESSRVGVCCVGRRGMGGCGVGGHGTCRDVGGHDVGCRGMGRRGVGLA 60

[Close]
BLAST of MELO3C027285 vs. ExPASy TrEMBL
Match: A0A5A7UVP7 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00720 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.5e-07
Identity = 34/61 (55.74%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 1  MYSRDEIYREGRSESSRVGVCCMGRHGM-------------------GCRGMGRRDVGRS 43
          MY RDEIY++GRSESSRVGVCC+GR GM                   GCRGMGRR VG +
Sbjct: 1  MYRRDEIYQQGRSESSRVGVCCVGRRGMGGCGVGGHGTCRDVGGHDVGCRGMGRRGVGLA 60

[Close]
BLAST of MELO3C027285 vs. ExPASy TrEMBL
Match: A0A5D3BTP1 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00130 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.5e-07
Identity = 34/61 (55.74%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 1  MYSRDEIYREGRSESSRVGVCCMGRHGM-------------------GCRGMGRRDVGRS 43
          MY RDEIY++GRSESSRVGVCC+GR GM                   GCRGMGRR VG +
Sbjct: 1  MYRRDEIYQQGRSESSRVGVCCVGRRGMGGCGVGGHGTCRDVGGHDVGCRGMGRRGVGLA 60

The following BLAST results are available for this feature:
BLAST of MELO3C027285 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK02534.15.2e-0755.74putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0059154.15.2e-0755.74putative mitochondrial protein [Cucumis melo var. makuwa][more]
BLAST of MELO3C027285 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C027285 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UVP72.5e-0755.74Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3BTP12.5e-0755.74Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
BLAST of MELO3C027285 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C027285.1MELO3C027285.1mRNA