MELO3C027211 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATTCCCGATAGCAAACCACTCAAATTTGCACTTCAGTGCATCAATGGAATTGGCCAAGCGAGAGCAAACCAAGTTCTTGCCCAGCTTCCTTGGAAAACAAGCTTGCCAAAGATATTACTAAAAGAGAGCTCCTTGTTCTTGCAGACCAGATTTCCAAGTACACGGTTGGACATGAGCTG ATGAAGATTCCCGATAGCAAACCACTCAAATTTGCACTTCAGTGCATCAATGGAATTGGCCAAGCGAGAGCAAACCAAGTTCTTGCCCAGCTTCCTTGGAAAACAAGCTTGCCAAAGATATTACTAAAAGAGAGCTCCTTGTTCTTGCAGACCAGATTTCCAAGTACACGGTTGGACATGAGCTG ATGAAGATTCCCGATAGCAAACCACTCAAATTTGCACTTCAGTGCATCAATGGAATTGGCCAAGCGAGAGCAAACCAAGTTCTTGCCCAGCTTCCTTGGAAAACAAGCTTGCCAAAGATATTACTAAAAGAGAGCTCCTTGTTCTTGCAGACCAGATTTCCAAGTACACGGTTGGACATGAGC MKIPDSKPLKFALQCINGIGQARANQVLAQLPWKTSLPKILLKESSLFLQTRFPSTRLDMS Homology
BLAST of MELO3C027211 vs. NCBI nr
Match: KAA0047526.1 (small ribosomal subunit protein S13 [Cucumis melo var. makuwa] >TYK26495.1 small ribosomal subunit protein S13 [Cucumis melo var. makuwa]) HSP 1 Score: 123.6 bits (309), Expect = 5.7e-25 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of MELO3C027211 vs. NCBI nr
Match: XP_004140326.1 (small ribosomal subunit protein S13, mitochondrial isoform X1 [Cucumis sativus] >XP_031741498.1 small ribosomal subunit protein S13, mitochondrial-like isoform X1 [Cucumis sativus] >KGN50980.1 hypothetical protein Csa_007892 [Cucumis sativus]) HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of MELO3C027211 vs. NCBI nr
Match: XP_011655183.1 (small ribosomal subunit protein S13, mitochondrial-like isoform X2 [Cucumis sativus] >XP_011655184.1 small ribosomal subunit protein S13, mitochondrial-like isoform X2 [Cucumis sativus] >XP_031741499.1 small ribosomal subunit protein S13, mitochondrial-like isoform X2 [Cucumis sativus] >KAE8652086.1 hypothetical protein Csa_018623 [Cucumis sativus]) HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of MELO3C027211 vs. NCBI nr
Match: XP_022993181.1 (small ribosomal subunit protein S13, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 54.7 bits (130), Expect = 3.3e-04 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of MELO3C027211 vs. NCBI nr
Match: XP_022141627.1 (30S ribosomal protein S13, chloroplastic-like [Momordica charantia]) HSP 1 Score: 54.7 bits (130), Expect = 3.3e-04 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of MELO3C027211 vs. ExPASy TrEMBL
Match: A0A5D3DT03 (Small ribosomal subunit protein S13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00670 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.8e-25 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of MELO3C027211 vs. ExPASy TrEMBL
Match: A0A0A0KMX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G381850 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.9e-08 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of MELO3C027211 vs. ExPASy TrEMBL
Match: A0A6J1JVL8 (small ribosomal subunit protein S13, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111489279 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of MELO3C027211 vs. ExPASy TrEMBL
Match: A0A6J1CKC9 (30S ribosomal protein S13, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111011935 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of MELO3C027211 vs. ExPASy TrEMBL
Match: A0A6J1FGA3 (30S ribosomal protein S13, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445150 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.5e-04 Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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