MELO3C027180.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C027180.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Membrane-associated 30 kDa protein
Location	chr08: 15879326 .. 15879780 (+)
RNA-Seq Expression	MELO3C027180.jh1
Synteny	MELO3C027180.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAACCCAAATCTCTATTCTCCAATCTAACCTCAATCCTAAACTGCACTATGAAGTTTCAAAAGATTGCTGCCCTCCTGATTATTTGTGTTGTGTTTGGCATTGTCTTTAGCCATATAGGTACAGTTGATGCAGCCCGAATGCTCTCCGAGACTTTACGTGATGATCATGATGTTGATTGTATTGATTCATATTCGATAGATCACCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGAGTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACATGCTCGCTAGATGTGTCATCTTTGGATTTCGTAGATCAACTATGAATGAAGTTACAAATGAAGTGTAATTGTAGAAGCAACTAAGGATGGAGTTAGGATAAAATGTAATACCTAACTCATTAAATATAATCTTAATAAACGAATCCCTTCTTT

mRNA sequence

CTAAAACCCAAATCTCTATTCTCCAATCTAACCTCAATCCTAAACTGCACTATGAAGTTTCAAAAGATTGCTGCCCTCCTGATTATTTGTGTTGTGTTTGGCATTGTCTTTAGCCATATAGGTACAGTTGATGCAGCCCGAATGCTCTCCGAGACTTTACGTGATGATCATGATGTTGATTGTATTGATTCATATTCGATAGATCACCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGAGTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACATGCTCGCTAGATGTGTCATCTTTGGATTTCGTAGATCAACTATGAATGAAGTTACAAATGAAGTGTAATTGTAGAAGCAACTAAGGATGGAGTTAGGATAAAATGTAATACCTAACTCATTAAATATAATCTTAATAAACGAATCCCTTCTTT

Coding sequence (CDS)

ATGAAGTTTCAAAAGATTGCTGCCCTCCTGATTATTTGTGTTGTGTTTGGCATTGTCTTTAGCCATATAGGTACAGTTGATGCAGCCCGAATGCTCTCCGAGACTTTACGTGATGATCATGATGTTGATTGTATTGATTCATATTCGATAGATCACCACAAAGCAAAGGATAGTGTCAAATGTTGGCTTGAAAACTTAGAGTCTGGACCGAGTCCTAAGGGCCCAGGACACGGCACACGCCCCCCAGCACATGCTCGCTAG

Protein sequence

MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVKCWLENLESGPSPKGPGHGTRPPAHAR

Homology

[Close]

BLAST of MELO3C027180.jh1 vs. NCBI nr
Match: KAA0043548.1 (hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 175 bits (443), Expect = 4.31e-55
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60
          MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLENLESGPSPKGPGHGTRPPAHAR 86
          CWLENLESGPSPKGPGHGTRPPAHAR
Sbjct: 61 CWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of MELO3C027180.jh1 vs. NCBI nr
Match: TYK02483.1 (hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (440), Expect = 1.24e-54
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60
          MKFQKIAALLIIC+VFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLENLESGPSPKGPGHGTRPPAHAR 86
          CWLENLESGPSPKGPGHGTRPPAHAR
Sbjct: 61 CWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of MELO3C027180.jh1 vs. NCBI nr
Match: KAA0043550.1 (hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 157 bits (396), Expect = 6.81e-48
Identity = 79/88 (89.77%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHI--GTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDS 60
          MKFQKIAALLI+CVVFGIVFSHI  GTVDAARML ETLRDDHDVDC+D YSIDHHKAKDS
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60

Query: 61 VKCWLENLESGPSPKGPGHGTRPPAHAR 86
          VKCWLENL SGPS KGPGHGTRPPAH R
Sbjct: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88

[Close]

BLAST of MELO3C027180.jh1 vs. NCBI nr
Match: KAG7018440.1 (hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 96.3 bits (238), Expect = 7.67e-24
Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60
          MKFQKI +  I+CVVFGI+ S I T+DAAR+LSET   +H VD ID YSI + KAK++V 
Sbjct: 11 MKFQKIRSFFIVCVVFGIILSQISTIDAARVLSET--SNHGVDYIDPYSIVYQKAKETVS 70

Query: 61 CWLENLESGPSPKGPGH 77
          CWL  L SGPSP GPGH
Sbjct: 71 CWLGKLSSGPSPSGPGH 85

[Close]

BLAST of MELO3C027180.jh1 vs. NCBI nr
Match: KGN53025.1 (hypothetical protein Csa_015299 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 3.34e-22
Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAAR-MLSETLRDDHD--VDC-IDSYSIDHHKAK 60
          MKFQKI  LLI+CV+ G+V S I   DAAR +LSET RDDHD  VD  ID YSI + KAK
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVADAARILLSETPRDDHDHGVDYHIDPYSIVYQKAK 61

Query: 61 DSVKCWLENLESGPSPKGPGH 77
          +S+ CWL  L SGPSP GPGH
Sbjct: 62 ESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of MELO3C027180.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TL44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00460 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 2.09e-55
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60
          MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK
Sbjct: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLENLESGPSPKGPGHGTRPPAHAR 86
          CWLENLESGPSPKGPGHGTRPPAHAR
Sbjct: 61 CWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of MELO3C027180.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BS33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00050 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 5.99e-55
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60
          MKFQKIAALLIIC+VFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK
Sbjct: 1  MKFQKIAALLIICLVFGIVFSHIGTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDSVK 60

Query: 61 CWLENLESGPSPKGPGHGTRPPAHAR 86
          CWLENLESGPSPKGPGHGTRPPAHAR
Sbjct: 61 CWLENLESGPSPKGPGHGTRPPAHAR 86

[Close]

BLAST of MELO3C027180.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TJV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00490 PE=4 SV=1)

HSP 1 Score: 157 bits (396), Expect = 3.30e-48
Identity = 79/88 (89.77%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHI--GTVDAARMLSETLRDDHDVDCIDSYSIDHHKAKDS 60
          MKFQKIAALLI+CVVFGIVFSHI  GTVDAARML ETLRDDHDVDC+D YSIDHHKAKDS
Sbjct: 1  MKFQKIAALLIVCVVFGIVFSHIDIGTVDAARMLFETLRDDHDVDCVDPYSIDHHKAKDS 60

Query: 61 VKCWLENLESGPSPKGPGHGTRPPAHAR 86
          VKCWLENL SGPS KGPGHGTRPPAH R
Sbjct: 61 VKCWLENLGSGPSLKGPGHGTRPPAHVR 88

[Close]

BLAST of MELO3C027180.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KTV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.62e-22
Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAAR-MLSETLRDDHD--VDC-IDSYSIDHHKAK 60
          MKFQKI  LLI+CV+ G+V S I   DAAR +LSET RDDHD  VD  ID YSI + KAK
Sbjct: 2  MKFQKITTLLIVCVLVGVVLSQINVADAARILLSETPRDDHDHGVDYHIDPYSIVYQKAK 61

Query: 61 DSVKCWLENLESGPSPKGPGH 77
          +S+ CWL  L SGPSP GPGH
Sbjct: 62 ESISCWLGKLSSGPSPSGPGH 82

[Close]

BLAST of MELO3C027180.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L125 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.08e-18
Identity = 51/88 (57.95%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 1  MKFQKIAALLIICVVFGIVFSHIGTVDAARML-----SETLRDDHDVDCIDSYSIDHHKA 60
          MKFQ I+ LLI+CVVFGIVFSH G VDA R+L     S            D Y+    KA
Sbjct: 1  MKFQNISTLLIVCVVFGIVFSHTGVVDATRVLLGSGPSPGGPGHGTKPPADPYTF---KA 60

Query: 61 KDSVKCWLENLESGPSPKGPGHGTRPPA 83
          K+ VK WLENL SGPSP GPGHGT+PPA
Sbjct: 61 KERVKPWLENLGSGPSPGGPGHGTKPPA 85

The following BLAST results are available for this feature:

BLAST of MELO3C027180.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043548.1	4.31e-55	100.00	hypothetical protein E6C27_scaffold335G00460 [Cucumis melo var. makuwa]	[more]
TYK02483.1	1.24e-54	98.84	hypothetical protein E5676_scaffold784G00050 [Cucumis melo var. makuwa]	[more]
KAA0043550.1	6.81e-48	89.77	hypothetical protein E6C27_scaffold335G00490 [Cucumis melo var. makuwa]	[more]
KAG7018440.1	7.67e-24	63.64	hypothetical protein SDJN02_20308, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN53025.1	3.34e-22	64.20	hypothetical protein Csa_015299 [Cucumis sativus]	[more]

BLAST of MELO3C027180.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C027180.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TL44	2.09e-55	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BS33	5.99e-55	98.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TJV8	3.30e-48	89.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KTV4	1.62e-22	64.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011720 PE=4 SV=1	[more]
A0A0A0L125	1.08e-18	57.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165860 PE=4 SV=1	[more]

BLAST of MELO3C027180.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..86
None	No IPR available	PANTHER	PTHR37245:SF4	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..77
IPR040273	PAMP-induced secreted peptide 1	PANTHER	PTHR37245	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027180.jh1.t1	MELO3C027180.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response