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MELO3C027158.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GAAAATCGATCATATCATGTCAACCGAAGCTAGAAAAGATCCGACTGAAGCCGGGTCATCGTCGAGAACGACGACGACGACGACGACGGCGGCGTTGAGTCGGTACGAGTCACAAAAACGACGTGATTGGAACACGTTCGGACAGTATCTGAAAAATCAAACGCCGCCGGTTTCACTGTCGCAGTGTAACTGCAACCACGTGCTGGAATTCTTGAGGTACTTGGATCAGTTCGGAAAGACTAAGGTTCATTTACATGGGTGTGTTTTCTTCGGGCAGCCTGACCCACCTGCCCCTTGTACCTGCCCACTCCGTCAAGCATGGGGAAGTCTCGACGCGCTGATCGGACGTCTTCGAGCGGCGTACGAAGAACACGGCGGATCGCCTGAAACAAATCCTTTCGGAAATGGAGCCATTCGTGTTTATTTAAGGGAAGTTAAGGAGTGTCAAGCTAAAGCAAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGAACTCAATTGAAATCCAACGATGATGATATCAACAACAACAACAACAACAACAAACAACCCATCAAGCATCTCCCTTGATTCAATTTATCCTGGTAAATAAAATTTCCATTTCCATTTAATTTTCATATCTATATAGTTTATTTTCTTTATTAAAATACCCCAATAATTAGCCTTTAAAATAGACTTCATTTTTACAAACCAATAATTGATTCATAACATACATACCTGGGAATAATAATCAAATAAAAGCTCATAATATCTATTTGGAGTTAGTTGTAAGGAAGAAAAGGGGGGAAATCAAATTCAAAAACCCTAGAGATAACGTAACTCGAATTAAGAACAAAACCCTAATTTTGATATAGGATATAATCAATTAGTAATTAAAACACAGAATTTTTTTTCCCACAAAATCAGAAGCTACTGTATGAATTTTGGAACCGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAATCAAACAAAGGACTTTTAATTTTTTTTTTTTTTTTATGATTGACTTAATTAAATACTTCATTTAAATTCTCACCTTTTACTAGTTTTTGGCTCTTTTGTGATTCTGTGCGATTTTGTGCTCCCCATGCATGGATGGAAATGGAATGACCATATAATATAAAATATATACACACATTGATATGATATGATATATTTCTGTGTGTGTATATATATTTGCATGTGAATTTTCCTTCGTTTATATAGTGTTTATGCTGTTTTTATTCTTCACCTTAATTTAATTTTATAAATTCATTCTGTTTTCTTTTCTCAGCTTAAAACTGTGCATTATTTTGTTCTATATTTAACAAACAGAACCCACCTATATTCAAAAATAAAAAGAAAAAGAAAAGAAAAATAAAAGTTGAAATAAGTGTTCCCCTTTTTTCTGTCTCTTTGATTGATTTATGTATGAATCAATGGAACATCATGGGAACTTTGTTCCTAAATAGTGATTTCCTTTTTTTGTCTCAAAGTTTTGGATGGTATAACCAGTAAGAGATCGATGTGTTTTTTCTTCTTTTTTTTTTCCCCTTTGTACTCATTTTTATACCAATTTTAAGTTGACGATGGATAATCTTTTTCTTTTTTCGTATAAATTATCTTAACTAAGAATTCAATCACTAACTTCAAATTTGATATGATAAACACTATTTCAGTTGAATTATACTTATTTTAATAGATATTCTTCGAGATTGATAACACAAACAAACATCATCTCGATCGGTTATTTTCAAGTTTTTTTAATTAAAAAAATTAATGGTTTTAAAGTATAAATTATGATTAGTATTTTATTTTCTGTGACAAATATGGATTTGTGTTCTTTTTTATTTTAATTTTCTTAAGATATTCTAGTTTTCTGGTTTAGATTATAAAAGCCTTCTTAACCATTAACATAAGATTCTTCAACAGTGGAGACTTTGGGTAAAGTTCATTTAAACAGAATTAATTAGTGCATGTTGATAGAATTAAATGTTAATTATCAGATCTTTTTGTGTAATCTAATTAATCTATTTAACATGATATTTAGAAATGGTTGTTGTGAGATTAAAGATTTGATTTACCTTTTTTGTTTCAGTGTTAGTTGCCTTATTGCTATTGCATTAGAAGAAGTTTCATCATTAAGATTAATGGTTGACAGATTTGTGGTCATTAATTGTTTTAGTCTATGTTTTCTAAAAATGAAAACCTTTAAATAAATAAACTCAACAACAGAAAATTTTGCTTTCAACATTTTGGACCTATTAATTGGTATCTGATCTAAAATTAGTTCTTTTCTTATTCTAAGAAAGAATGGAAATAGGAAATATTAATTAGCTTGACATTATTGGATTATGAAAGCCATTAAAACTATATTTCTAGATATATATAAATCTTTAAAGCAGAAGAACTTTTTAGAAAAGATTGTACCGTTGGGTTTAATGTTTACAAAATTTCTTTCAACTATTGTATTTTCTAGGACATGGGCATATGCATCTGCCTCAACTTTTTTTTTTTTTAAGGAGAAAATTCAAATTTCCTATATGTTTTAGTTGATGTTATATATCTTTGATTTTTTATTTTTGTAAAGTTTCAAATATATGCAATTCTATATTTGGTTGATGTTGTTCTTTTTAAAGTTTATTGATAAAAGTATAAGGAATAATCTCCACAATGTTATGATATTATTCACTTTAGATTTAACTCTCCATGGCTTTGTTTTTGAAATTACCTAAAAGACTTCATGTCTATAGAGATTGTTGTTCTCATCCATATATCATATAGAGATTCTCTTTCTTTCTTGTCAAATGTGAGACCTTTTCTATCTATCTAACAATCCTCTCTCTTTGAACAAAGTAAGAGGGCTTGAGGTTCTCTCCAAACAAATCTATTCACTCCCAACAATGAGAGCTCGTCAATTCTCAATTCTAAAGTAAATATCCAAGTAGAGAACGAGCAGAGATTACACTTCCTCTTTTTAAGGTGAGTAGGAAACACCTTAGAAGAAATGAGGCTCACTAGTTTTCTCTATTCCAAAATCTGAAGATTTGTGTTATGATATATAGGTTTAAGTCGACTCTAATAAAGTGACAAAAATAAGGGACTTCCACAATGGTACAACATTGTTTACTTTTAGCATAATCACTCAAAAACCTCATATTGATGAAGTTTATTACTCTCAATTATATATAATTAATCTCTTCTTTTTCTGAGTATCGTAGATCTTTGTTTGGACTCCTATCCATGTCATTGTTAGGGACAATAACTCACCACTATCTTCACAATTATATGATATATATGTCTACTTCAGACAATACATAAGCTCACATGTCTTTATATAGCCAATGACCACTAAGTCTCTCCCCTCAAATGATTATCTATCCATCGATCTAACTCGATCCTTATCTAGGTCAACTCCTAAATGTTCGCTAGAGCACACAACATAATCAATAGAGCCTGTCCCCTTTAGGCATAAGCCAACATGGTTTTAGTTTTGATTTTCACCGAGAAGAGCTCATGAGAATTGATATTGTTTCACATGCATAAACATAATTCTCCTTCGCTCTGGCCACCATGGGACTAGTTACATTACCAATATATTTTTTTTTTTTGAAACTCAATCTAAACTTAAATAATTAAAACATTATTTACCCCAAATAAGAGGTTAAAGAGATTCGAATTCTTCTCACTTACCAAATTATGTCCAAAGTACAAAAAGAAAAAAAAAAAGAAAAAAAGCTCCTATTTTAACTCCTCTAATTAGGGAAGAGGAAATTGAATCCAAGATATAATAGACGAAGTTACATTGAACAACCCAACCTCATGGAGAAGTTATATTTGATTTATGGATAACATGCATGTATTTGTAGTTTATTAAGTTGGTACCTTTTTTACATTTTAAATCTTATTAGGCCTTGAAATCTAACATAAATAGATGTGAAATTTTAATTGGGTTTTTCTTAGATTTCAAAGAGTAGAATAAACTTTATTTTTAAATGTTCCTATTTTAATTTGGATTTCTTAGAATATACAATACCTTATTATTTTTTTAAAATTGGTATTATTTAATGAAAAAACAAATATTTCTTCAATAAAAATATAGTATAATTTACAACAATGACATTTTAAATTCCTATGCCTATAATTTGTGGTACATCTGATAAATTTTACAATAATTATATTTCTGTTTGAAAGTTCAAATTTCTCACTCAAATTTTTTAACTAAAAAAAAATTCTTATTAATTTCAAATCAATTTAACTCGATAAAAAAAAATCTCTGAAAAATTGAATTTAAGAAAAATAAATAAAAGATTTTAATTCTTTTTACCAACCCTTTGCTGTTCTTAACAATTATAGCAAATATAGGAAAAGCTTCGTATTTCTTTGATTGTGGTCTAGTGTGAGGAGTTTAGCTAGCTAGATTATCTTTTTTTCTTTTAAGAAAATAGAAAACTATTACCTTGACTCAGCTTATATATCAGAGAAAATGTTTAGCAAAACCATTAACTTTTTTAACCAGACACAAATAGAAGATAGAGATCAGGAGGTGTACCCAATCACTAGCACCTTTGTCGACTCTTAAATCCATACAAAACAAAACTTCATTATCACAAAAAAGAGTCAGGTAAAAAAGAAAAGAGAGAGATCAGAGGAAAAGCTTCCAATGTGAAGCCATGGAAGATATACAAATCATTAACTCTACTAAAAAGAAAACTAAGCCAACCTAAATTTTATCAGAAATTTGAAAGAGTCAAGGAAAGCTGAGTTATTGGTAAAAATCTTAAACCAATCAAATGAATTCATTTGCTAAAGCATCATTGTTAGAACAATATACTAAAAAGATCACATTTATATATATATGTCCTTACTTTAGCTTCACTTTTTCAATCTATAGTAAGAAGTTAAACTAAAAAAAATAAGAGATGTTAATTAAAATTTAAGCTTCCATGATAATATTTCCCTTTCATTTCTTATACTTAATATATTTTATAGGTTGGATGTCATATTAATTATTAAGATTCTAAAACTACAATTAGAGAGTGCTAAAACATAGATTTAAATATATCTACACCCTAAAACCTACCCATTCAAAGTGTGTCCATGTTGTTATTTAACCATCACTTATACTTTAATTTTCTTTTTCATTTTTCTTAAGCGAAAGGAAAGAAGTGTCATATACTTTTGTTGTTTTTAAAATTTAAATACTTATCGAACGAGAATGTAAAATTGTCTATAAAACCAAAAAGAGCTCGCTCTACTCCCAAATCTCTAAACTTTAGTTTCTTGATATTTTGTTAGGGTTTTACTCTAGAATAGCAATAGAGAATATCTCCCATTGTATTGTTGCTTATTTATCAAAATATATTCTATTGCATTAATTGTAGCAACATTATTAAGATATATTGATCTATAAGAATCTAATATTTATTAAAGTTAAAAAATATATCACTTTTCTTTTAATTTCAGGACAAGAAAGCAACCGATCAAGAGTGTATAAATGTGGAACGAGTTGAAGGGTTTTTTTTTTCTATATGATAAATTAAAATACTTATGTTATTGTAGAGTTAATTATATAAAGAAATAGAGAATTTGAATAAAAAAAGATTAAATTAGAATATAGTAATGTAGCAAAAGGTAGCTAAGCAAGCAATGTGTTTGCTCCTATTTTAGTTGTTAATTTAAAAAAAAAAAAAAAAAAAAAACCCCAAACTTTGTAGGTTCACTTTTTAATTATTCCATATTAGAAGGTCACAAACCAAGGTACTATACATTGTCAGTTTTACCCTTCACATTTAAGAAGAAAATTGTCCTTTCAAT GAAAATCGATCATATCATGTCAACCGAAGCTAGAAAAGATCCGACTGAAGCCGGGTCATCGTCGAGAACGACGACGACGACGACGACGGCGGCGTTGAGTCGGTACGAGTCACAAAAACGACGTGATTGGAACACGTTCGGACAGTATCTGAAAAATCAAACGCCGCCGGTTTCACTGTCGCAGTGTAACTGCAACCACGTGCTGGAATTCTTGAGGTACTTGGATCAGTTCGGAAAGACTAAGGTTCATTTACATGGGTGTGTTTTCTTCGGGCAGCCTGACCCACCTGCCCCTTGTACCTGCCCACTCCGTCAAGCATGGGGAAGTCTCGACGCGCTGATCGGACGTCTTCGAGCGGCGTACGAAGAACACGGCGGATCGCCTGAAACAAATCCTTTCGGAAATGGAGCCATTCGTGTTTATTTAAGGGAAGTTAAGGAGTGTCAAGCTAAAGCAAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGAACTCAATTGAAATCCAACGATGATGATATCAACAACAACAACAACAACAACAAACAACCCATCAAGCATCTCCCTTGATTCAATTTATCCTGAGGGCTTGAGGTTCTCTCCAAACAAATCTATTCACTCCCAACAATGAGAGCTCGTCAATTCTCAATTCTAAAGTAAATATCCAAGTAGAGAACGAGCAGAGATTACACTTCCTCTTTTTAAGGACAAGAAAGCAACCGATCAAGAGTGTATAAATGTGGAACGAGTTGAAGGGTTTTTTTTTTCTATATGATAAATTAAAATACTTATGTTATTGTAGAGTTAATTATATAAAGAAATAGAGAATTTGAATAAAAAAAGATTAAATTAGAATATAGTAATGTAGCAAAAGGTAGCTAAGCAAGCAATGTGTTTGCTCCTATTTTAGTTGTTAATTTAAAAAAAAAAAAAAAAAAAAAACCCCAAACTTTGTAGGTTCACTTTTTAATTATTCCATATTAGAAGGTCACAAACCAAGGTACTATACATTGTCAGTTTTACCCTTCACATTTAAGAAGAAAATTGTCCTTTCAAT ATGTCAACCGAAGCTAGAAAAGATCCGACTGAAGCCGGGTCATCGTCGAGAACGACGACGACGACGACGACGGCGGCGTTGAGTCGGTACGAGTCACAAAAACGACGTGATTGGAACACGTTCGGACAGTATCTGAAAAATCAAACGCCGCCGGTTTCACTGTCGCAGTGTAACTGCAACCACGTGCTGGAATTCTTGAGGTACTTGGATCAGTTCGGAAAGACTAAGGTTCATTTACATGGGTGTGTTTTCTTCGGGCAGCCTGACCCACCTGCCCCTTGTACCTGCCCACTCCGTCAAGCATGGGGAAGTCTCGACGCGCTGATCGGACGTCTTCGAGCGGCGTACGAAGAACACGGCGGATCGCCTGAAACAAATCCTTTCGGAAATGGAGCCATTCGTGTTTATTTAAGGGAAGTTAAGGAGTGTCAAGCTAAAGCAAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGAACTCAATTGAAATCCAACGATGATGATATCAACAACAACAACAACAACAACAAACAACCCATCAAGCATCTCCCTTGA MSTEARKDPTEAGSSSRTTTTTTTAALSRYESQKRRDWNTFGQYLKNQTPPVSLSQCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRVYLREVKECQAKARGIPYKKKKRKRTQLKSNDDDINNNNNNNKQPIKHLP Homology
BLAST of MELO3C027158.jh1 vs. NCBI nr
Match: KAA0057039.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa]) HSP 1 Score: 369 bits (947), Expect = 8.26e-129 Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. NCBI nr
Match: XP_008465553.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_016903415.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo]) HSP 1 Score: 363 bits (931), Expect = 2.20e-126 Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. NCBI nr
Match: XP_011657745.2 (LOW QUALITY PROTEIN: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus]) HSP 1 Score: 355 bits (911), Expect = 3.38e-123 Identity = 180/191 (94.24%), Postives = 181/191 (94.76%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. NCBI nr
Match: XP_038896042.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida] >XP_038896043.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida]) HSP 1 Score: 345 bits (885), Expect = 2.43e-119 Identity = 175/185 (94.59%), Postives = 175/185 (94.59%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. NCBI nr
Match: XP_031737260.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis sativus] >KAE8653217.1 hypothetical protein Csa_020024 [Cucumis sativus]) HSP 1 Score: 341 bits (874), Expect = 4.25e-117 Identity = 169/174 (97.13%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 7.2e-66 Identity = 118/152 (77.63%), Postives = 133/152 (87.50%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.0e-60 Identity = 114/159 (71.70%), Postives = 131/159 (82.39%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy Swiss-Prot
Match: Q9SN52 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LSH9 PE=1 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.3e-59 Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy Swiss-Prot
Match: Q9ZVA0 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 OS=Arabidopsis thaliana OX=3702 GN=LSH7 PE=1 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.7e-59 Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.3e-59 Identity = 104/137 (75.91%), Postives = 120/137 (87.59%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UU18 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002260 PE=3 SV=1) HSP 1 Score: 369 bits (947), Expect = 4.00e-129 Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy TrEMBL
Match: A0A1S4E614 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103503180 PE=3 SV=1) HSP 1 Score: 363 bits (931), Expect = 1.06e-126 Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy TrEMBL
Match: A0A0A0M097 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G474480 PE=3 SV=1) HSP 1 Score: 353 bits (905), Expect = 1.13e-122 Identity = 178/188 (94.68%), Postives = 179/188 (95.21%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GSW5 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111457135 PE=3 SV=1) HSP 1 Score: 316 bits (809), Expect = 6.21e-108 Identity = 160/192 (83.33%), Postives = 165/192 (85.94%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KGX1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111495158 PE=3 SV=1) HSP 1 Score: 313 bits (803), Expect = 3.60e-107 Identity = 153/176 (86.93%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 251.5 bits (641), Expect = 5.1e-67 Identity = 118/152 (77.63%), Postives = 133/152 (87.50%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) ) HSP 1 Score: 251.5 bits (641), Expect = 5.1e-67 Identity = 118/152 (77.63%), Postives = 133/152 (87.50%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) ) HSP 1 Score: 233.4 bits (594), Expect = 1.4e-61 Identity = 114/159 (71.70%), Postives = 131/159 (82.39%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. TAIR 10
Match: AT4G18610.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 230.7 bits (587), Expect = 9.4e-61 Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 0
BLAST of MELO3C027158.jh1 vs. TAIR 10
Match: AT1G78815.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 230.3 bits (586), Expect = 1.2e-60 Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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