MELO3C027055 (gene) Melon (DHL92) v4

Overview


Name	MELO3C027055
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Location	chr06: 22560295 .. 22560861 (-)
RNA-Seq Expression	MELO3C027055
Synteny	MELO3C027055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAATTGATACATCACAAGTCCAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAATTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGAATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATCTGCTTCCATCTAGAGGTGATACTCGCTTATTCAGTATGGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTACCTATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTCTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATATCTCTACGTGTGATTCGTTGA

mRNA sequence

ATGATAATTGATACATCACAAGTCCAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAATTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGAATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATCTGCTTCCATCTAGAGGTGATACTCGCTTATTCAGTATGGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTACCTATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTCTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATATCTCTACGTGTGATTCGTTGA

Coding sequence (CDS)

ATGATAATTGATACATCACAAGTCCAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAATTCTATGGAATTCTATGGGTACTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATAGGCGTACTAGTAATTGTATGGTTAGAAAGAGAAATATCCGCAGGAATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATCTGCTTCCATCTAGAGGTGATACTCGCTTATTCAGTATGGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTACCTATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTCTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTGTATTATCAATATCTCTACGTGTGATTCGTTGA

Protein sequence

MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRVIR

Homology

[Close]

BLAST of MELO3C027055 vs. NCBI nr
Match: ASY96384.1 (NADH dehydrogenase subunit 1 [Cucumis melo subsp. agrestis] >ASY96644.1 NADH dehydrogenase subunit 1 [Cucumis melo var. conomon] >ASY96732.1 NADH dehydrogenase subunit 1 [Cucumis melo var. makuwa] >ASY96819.1 NADH dehydrogenase subunit 1 [Cucumis melo var. momordica] >ASY96906.1 NADH dehydrogenase subunit 1 [Cucumis melo var. dudaim] >ASY96993.1 NADH dehydrogenase subunit 1 [Cucumis melo var. cantalupo] >ASY97167.1 NADH dehydrogenase subunit 1 [Cucumis melo var. inodorus] >ASY97341.1 NADH dehydrogenase subunit 1 [Cucumis melo var. flexuosus] >QRW36611.1 NADH dehydrogenase subunit 1 [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of MELO3C027055 vs. NCBI nr
Match: YP_004841840.1 (NADH-plastoquinone oxidoreductase subunit 1 [Cucumis melo subsp. melo] >YP_009860130.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis melo subsp. agrestis] >AEM76950.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis melo subsp. melo] >QJF46441.1 NADH dehydrogenase subunit 1 [Cucumis melo] >QKK36714.1 NADH-plastoquinone oxidoreductase subunit 1 [Cucumis melo subsp. agrestis])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of MELO3C027055 vs. NCBI nr
Match: ASY97515.1 (NADH dehydrogenase subunit 1 [Cucumis sativus var. hardwickii])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 184/186 (98.92%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDI+SFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFS+GPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of MELO3C027055 vs. NCBI nr
Match: QCY72897.1 (NdhA [Cucumis hystrix])

HSP 1 Score: 347.8 bits (891), Expect = 5.8e-92
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFS+GPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of MELO3C027055 vs. NCBI nr
Match: QHB76020.1 (NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo])

HSP 1 Score: 345.9 bits (886), Expect = 2.2e-91
Identity = 183/186 (98.39%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDI+SFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFS+GPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADL IGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLHIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of MELO3C027055 vs. ExPASy Swiss-Prot
Match: Q2QD36 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 2.9e-94
Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDI+SFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDIHSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFS+GPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of MELO3C027055 vs. ExPASy Swiss-Prot
Match: Q1KXQ8 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus OX=4232 GN=ndhA PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.3e-88
Identity = 169/184 (91.85%), Postives = 177/184 (96.20%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDT++VQ INSFSRLE LKE YGI+WVL+PI T VLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTTEVQAINSFSRLESLKEVYGIIWVLIPIFTPVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENLLPSRGDTRLFS+GPSIAVISILLSY VIPFGY
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADL IGVFLWIAISS+AP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLSIGVFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of MELO3C027055 vs. ExPASy Swiss-Prot
Match: A0A390 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica OX=13443 GN=ndhA PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 9.9e-87
Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDT+++Q INSF +LE LKE YGI+W+L+PI T VLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTTELQAINSFFKLESLKEVYGIIWILIPIFTLVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENLLPSRGD RLFS+GPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDARLFSIGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADL IGVFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLTIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of MELO3C027055 vs. ExPASy Swiss-Prot
Match: Q0ZIW3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhA PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 1.7e-86
Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDT +VQDINSFSRLE+LKE YGI+W+LVPI T VLGITIGVL IVWLEREISAGIQQ
Sbjct: 1   MIIDTPEVQDINSFSRLEYLKEVYGIIWMLVPIFTPVLGITIGVLAIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENLLPSRGDTRLFS+GPSIAVISILLSY +IPFG 
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLIIPFGS 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
            LVL+DL IGVFLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 NLVLSDLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of MELO3C027055 vs. ExPASy Swiss-Prot
Match: Q0G9Q7 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Daucus carota OX=4039 GN=ndhA PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 8.4e-86
Identity = 166/184 (90.22%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDT++VQ INSF RLE LKE Y I+W+LVPILT VLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTTEVQAINSFFRLESLKEVYDIIWMLVPILTLVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENLLPSRGDTRLFS+GPSIAV SILLSY VIPFGY
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVTSILLSYLVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLAD+ IGVFLWIAISS+AP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADVSIGVFLWIAISSIAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of MELO3C027055 vs. ExPASy TrEMBL
Match: A0A286NFL5 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhA PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.7e-94
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of MELO3C027055 vs. ExPASy TrEMBL
Match: A0A286NG39 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=ndhA PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.7e-94
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of MELO3C027055 vs. ExPASy TrEMBL
Match: A0A249RXW7 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=ndhA PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.7e-94
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of MELO3C027055 vs. ExPASy TrEMBL
Match: A0A249RZ39 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 GN=ndhA PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.7e-94
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of MELO3C027055 vs. ExPASy TrEMBL
Match: A0A249RYD7 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. conomon OX=3657 GN=ndhA PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.7e-94
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ
Sbjct: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY
Sbjct: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
           RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISLRV 187
           SISLRV
Sbjct: 181 SISLRV 186

[Close]

BLAST of MELO3C027055 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein )

HSP 1 Score: 294.7 bits (753), Expect = 5.4e-80
Identity = 155/184 (84.24%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MIIDTSQVQDINSFSRLEFLKEFYGILWVLVPILTTVLGITIGVLVIVWLEREISAGIQQ 60
           MII  + VQ INSF +LE LKE YG++W+ VPI + VLGI  GVLVIVWLEREISAGIQQ
Sbjct: 1   MIIYATAVQTINSFVKLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQ 60

Query: 61  RIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGY 120
           RIGPEYAGPLG+LQALADGTKLLFKENL PSRG+T LFS+GPSIAVISILLSYSVIPF  
Sbjct: 61  RIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSN 120

Query: 121 RLVLADLPIGVFLWIAISSVAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180
            LVLADL IG+FLWIAISS+APIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL
Sbjct: 121 HLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

Query: 181 SISL 185
           SISL
Sbjct: 181 SISL 184

[Close]

BLAST of MELO3C027055 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27
Identity = 66/161 (40.99%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 28  WVLVP--ILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFK 87
           ++ VP  IL  +L + +GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct: 2   YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 88  ENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGL 147
           E + PS  +  LF M P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G+
Sbjct: 62  EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 148 LMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 187
           +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ + V
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICV 162

[Close]

BLAST of MELO3C027055 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27
Identity = 66/161 (40.99%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 28  WVLVP--ILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFK 87
           ++ VP  IL  +L + +GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct: 2   YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 88  ENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGL 147
           E + PS  +  LF M P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G+
Sbjct: 62  EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 148 LMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 187
           +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ + V
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICV 162

[Close]

BLAST of MELO3C027055 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-27
Identity = 66/161 (40.99%), Postives = 106/161 (65.84%), Query Frame = 0


Query: 28  WVLVP--ILTTVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKLLFK 87
           ++ VP  IL  +L + +GV  +V  ER++ A +Q+R GP+  G  G+LQ LADG+KL+ K
Sbjct: 2   YIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGSKLILK 61

Query: 88  ENLLPSRGDTRLFSMGPSIAVISILLSYSVIPFGYRLVLADLPIGVFLWIAISSVAPIGL 147
           E + PS  +  LF M P    +  L++ +V+PF Y +VL+D  IG+    AISS+   G+
Sbjct: 62  EPISPSSANFFLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGI 121

Query: 148 LMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 187
           +++G  SN+KY+FLG LR+AAQ +SYE+ + L ++++ + V
Sbjct: 122 IIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICV 162

[Close]

BLAST of MELO3C027055 vs. TAIR 10
Match: AT2G07785.1 (NADH dehydrogenase family protein )

HSP 1 Score: 78.6 bits (192), Expect = 6.1e-15
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 56  AGIQQRIGPEYAGPLGVLQALADGTKLLFKENLLPSRGDTRLFSMGPSIAVISILLSYSV 115
           A +Q+R GP+  G  G+LQ LADG+KL+ KE + PS  +  LF M P    +  L++ +V
Sbjct: 2   AFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARAV 61

Query: 116 IPFGYRLVLADLPIGVFLWIAISSVAPIGLLMSGYGSN 154
           +PF Y +VL+D  IG+    AISS+   G++++G  SN
Sbjct: 62  VPFDYGMVLSDPNIGLLYLFAISSLGVYGIIIAGRSSN 99

The following BLAST results are available for this feature:

BLAST of MELO3C027055 vs. NCBI nr


Match Name	E-value	Identity	Description
ASY96384.1	1.8e-93	100.00	NADH dehydrogenase subunit 1 [Cucumis melo subsp. agrestis] >ASY96644.1 NADH deh...	[more]
YP_004841840.1	2.0e-92	100.00	NADH-plastoquinone oxidoreductase subunit 1 [Cucumis melo subsp. melo] >YP_00986...	[more]
ASY97515.1	2.0e-92	98.92	NADH dehydrogenase subunit 1 [Cucumis sativus var. hardwickii]	[more]
QCY72897.1	5.8e-92	99.46	NdhA [Cucumis hystrix]	[more]
QHB76020.1	2.2e-91	98.39	NADH dehydrogenase subunit 1 [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C027055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD36	2.9e-94	98.91	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q1KXQ8	5.3e-88	91.85	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus OX=...	[more]
A0A390	9.9e-87	90.22	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coffea arabica OX=134...	[more]
Q0ZIW3	1.7e-86	90.22	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Vitis vinifera OX=297...	[more]
Q0G9Q7	8.4e-86	90.22	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Daucus carota OX=4039...	[more]

BLAST of MELO3C027055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A286NFL5	8.7e-94	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. can...	[more]
A0A286NG39	8.7e-94	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. fle...	[more]
A0A249RXW7	8.7e-94	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo subsp. a...	[more]
A0A249RZ39	8.7e-94	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. dud...	[more]
A0A249RYD7	8.7e-94	100.00	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis melo var. con...	[more]

BLAST of MELO3C027055 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01100.1	5.4e-80	84.24	NADH dehydrogenase family protein	[more]
ATMG01120.1	1.8e-27	40.99	NADH dehydrogenase 1B	[more]
ATMG00516.1	1.8e-27	40.99	NADH dehydrogenase 1C	[more]
ATMG01275.1	1.8e-27	40.99	NADH dehydrogenase 1A	[more]
AT2G07785.1	6.1e-15	41.84	NADH dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 34..184 e-value: 4.1E-50 score: 170.8
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 26..184
None	No IPR available	PANTHER	PTHR11432:SF3	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1	coord: 26..184
IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site	PROSITE	PS00667	COMPLEX1_ND1_1	coord: 71..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C027055.1	MELO3C027055.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane