MELO3C026987 (gene) Melon (DHL92) v4

Overview


Name	MELO3C026987
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Peptidylprolyl isomerase
Location	chr04: 22171418 .. 22171582 (-)
RNA-Seq Expression	MELO3C026987
Synteny	MELO3C026987

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGATGAAGGTATCAACAGTGGAAAAGGGTGAAAATACAGTTTTCACGATACCCTTAGAATTGGCCTATGGAGAGTTCAACTCTCCGCCAACAATTCCACTGAACGCTACTCTCCAATTTGATGTTGAGCTACTTTCATGGCATAGCGTCAAAGACATCTGTTAA

mRNA sequence

AGGATGAAGGTATCAACAGTGGAAAAGGGTGAAAATACAGTTTTCACGATACCCTTAGAATTGGCCTATGGAGAGTTCAACTCTCCGCCAACAATTCCACTGAACGCTACTCTCCAATTTGATGTTGAGCTACTTTCATGGCATAGCGTCAAAGACATCTGTTAA

Coding sequence (CDS)

ATGAAGGTATCAACAGTGGAAAAGGGTGAAAATACAGTTTTCACGATACCCTTAGAATTGGCCTATGGAGAGTTCAACTCTCCGCCAACAATTCCACTGAACGCTACTCTCCAATTTGATGTTGAGCTACTTTCATGGCATAGCGTCAAAGACATCTGTTAA

Protein sequence

MKVSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC

Homology

[Close]

BLAST of MELO3C026987 vs. NCBI nr
Match: XP_022137935.1 (70 kDa peptidyl-prolyl isomerase-like [Momordica charantia])

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. NCBI nr
Match: XP_011651108.1 (70 kDa peptidyl-prolyl isomerase [Cucumis sativus] >KGN57238.1 hypothetical protein Csa_010602 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 1.6e-15
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IRTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. NCBI nr
Match: XP_038878197.1 (peptidyl-prolyl cis-trans isomerase FKBP62-like [Benincasa hispida])

HSP 1 Score: 92.0 bits (227), Expect = 1.6e-15
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IRTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. NCBI nr
Match: KAA0067644.1 (70 kDa peptidyl-prolyl isomerase-like [Cucumis melo var. makuwa] >TYK23646.1 70 kDa peptidyl-prolyl isomerase-like [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN +FTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IRTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. NCBI nr
Match: XP_008439052.1 (PREDICTED: 70 kDa peptidyl-prolyl isomerase-like [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN +FTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IRTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. ExPASy Swiss-Prot
Match: Q38931 (Peptidyl-prolyl cis-trans isomerase FKBP62 OS=Arabidopsis thaliana OX=3702 GN=FKBP62 PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-17
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELL W SVKDIC
Sbjct: 101 IKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELLKWDSVKDIC 151

[Close]

BLAST of MELO3C026987 vs. ExPASy Swiss-Prot
Match: Q9FJL3 (Peptidyl-prolyl cis-trans isomerase FKBP65 OS=Arabidopsis thaliana OX=3702 GN=FKBP65 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.8e-17
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN +FTIP ELAYGE  SPPTIP NATLQFDVEL++W SVKDIC
Sbjct: 109 IKTMKKGENAIFTIPPELAYGETGSPPTIPPNATLQFDVELIAWRSVKDIC 159

[Close]

BLAST of MELO3C026987 vs. ExPASy Swiss-Prot
Match: Q43207 (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum OX=4565 GN=FKBP70 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.5e-16
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDI 53
           + T++KGEN +FTIP ELAYGE  SPPTIP NATLQFDVELLSW SV+DI
Sbjct: 104 IKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDI 153

[Close]

BLAST of MELO3C026987 vs. ExPASy Swiss-Prot
Match: Q54NB6 (FK506-binding protein 4 OS=Dictyostelium discoideum OX=44689 GN=fkbp4 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.7e-05
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLS 46
           V++++ G     TIP +LAYG   +PP+IP NATL FDVEL+S
Sbjct: 319 VASMKVGGKRRLTIPADLAYGRSGAPPSIPPNATLIFDVELVS 361

[Close]

BLAST of MELO3C026987 vs. ExPASy Swiss-Prot
Match: P0C1J6 (FK506-binding protein 4 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=FKBP4 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.3e-04
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLS 46
           ++ ++ G     TIP  LAYG+  +PP IP NATL FDV+LLS
Sbjct: 338 IAGMKAGGERKLTIPAPLAYGKRGAPPDIPKNATLVFDVKLLS 380

[Close]

BLAST of MELO3C026987 vs. ExPASy TrEMBL
Match: A0A6J1C818 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111009228 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.0e-16
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. ExPASy TrEMBL
Match: A0A0A0L633 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_3G172920 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.8e-16
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IRTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. ExPASy TrEMBL
Match: A0A5A7VJU8 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00110 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN +FTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IRTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. ExPASy TrEMBL
Match: A0A1S3AXS5 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103483953 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN +FTIP ELAYGE  SPPTIP NATLQFDVELLSWHSVKDIC
Sbjct: 103 IRTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDIC 153

[Close]

BLAST of MELO3C026987 vs. ExPASy TrEMBL
Match: A0A3P6EMT7 (Peptidylprolyl isomerase OS=Brassica oleracea OX=3712 GN=BOLC7T44446H PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 1   MKVSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           M + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELLSW SVKDIC
Sbjct: 100 MGIKTMKKGENAVFTIPPELAYGETGSPPTIPANATLQFDVELLSWRSVKDIC 152

[Close]

BLAST of MELO3C026987 vs. TAIR 10
Match: AT3G25230.1 (rotamase FKBP 1 )

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-18
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELL W SVKDIC
Sbjct: 101 IKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELLKWDSVKDIC 151

[Close]

BLAST of MELO3C026987 vs. TAIR 10
Match: AT3G25230.2 (rotamase FKBP 1 )

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-18
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN VFTIP ELAYGE  SPPTIP NATLQFDVELL W SVKDIC
Sbjct: 101 IKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELLKWDSVKDIC 151

[Close]

BLAST of MELO3C026987 vs. TAIR 10
Match: AT5G48570.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 87.0 bits (214), Expect = 4.8e-18
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 3   VSTVEKGENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLSWHSVKDIC 54
           + T++KGEN +FTIP ELAYGE  SPPTIP NATLQFDVEL++W SVKDIC
Sbjct: 109 IKTMKKGENAIFTIPPELAYGETGSPPTIPPNATLQFDVELIAWRSVKDIC 159

[Close]

BLAST of MELO3C026987 vs. TAIR 10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2 )

HSP 1 Score: 44.7 bits (104), Expect = 2.7e-05
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 0


Query: 9   GENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLS 46
           GE     IP +L YGE  SPPTIP  ATL FD EL++
Sbjct: 102 GEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELIA 138

[Close]

BLAST of MELO3C026987 vs. TAIR 10
Match: AT3G25220.1 (FK506-binding protein 15 kD-1 )

HSP 1 Score: 40.4 bits (93), Expect = 5.2e-04
Identity = 19/37 (51.35%), Postives = 23/37 (62.16%), Query Frame = 0


Query: 9   GENTVFTIPLELAYGEFNSPPTIPLNATLQFDVELLS 46
           GE     IP +L YG+  SPP IP  ATL FD EL++
Sbjct: 102 GEKRKLKIPSKLGYGDNGSPPKIPGGATLIFDTELVA 138

The following BLAST results are available for this feature:

BLAST of MELO3C026987 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137935.1	1.2e-15	82.35	70 kDa peptidyl-prolyl isomerase-like [Momordica charantia]	[more]
XP_011651108.1	1.6e-15	82.35	70 kDa peptidyl-prolyl isomerase [Cucumis sativus] >KGN57238.1 hypothetical prot...	[more]
XP_038878197.1	1.6e-15	82.35	peptidyl-prolyl cis-trans isomerase FKBP62-like [Benincasa hispida]	[more]
KAA0067644.1	2.1e-15	80.39	70 kDa peptidyl-prolyl isomerase-like [Cucumis melo var. makuwa] >TYK23646.1 70 ...	[more]
XP_008439052.1	2.1e-15	80.39	PREDICTED: 70 kDa peptidyl-prolyl isomerase-like [Cucumis melo]	[more]

BLAST of MELO3C026987 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38931	1.8e-17	78.43	Peptidyl-prolyl cis-trans isomerase FKBP62 OS=Arabidopsis thaliana OX=3702 GN=FK...	[more]
Q9FJL3	6.8e-17	74.51	Peptidyl-prolyl cis-trans isomerase FKBP65 OS=Arabidopsis thaliana OX=3702 GN=FK...	[more]
Q43207	7.5e-16	76.00	70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum OX=4565 GN=FKBP70 PE=1 SV=...	[more]
Q54NB6	2.7e-05	53.49	FK506-binding protein 4 OS=Dictyostelium discoideum OX=44689 GN=fkbp4 PE=1 SV=1	[more]
P0C1J6	1.3e-04	51.16	FK506-binding protein 4 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / ...	[more]

BLAST of MELO3C026987 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C818	6.0e-16	82.35	Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111009228 PE=4 SV=...	[more]
A0A0A0L633	7.8e-16	82.35	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_3G172920 PE=4 SV=1	[more]
A0A5A7VJU8	1.0e-15	80.39	Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3AXS5	1.0e-15	80.39	Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103483953 PE=4 SV=1	[more]
A0A3P6EMT7	1.3e-15	79.25	Peptidylprolyl isomerase OS=Brassica oleracea OX=3712 GN=BOLC7T44446H PE=4 SV=1	[more]

BLAST of MELO3C026987 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25230.1	1.3e-18	78.43	rotamase FKBP 1	[more]
AT3G25230.2	1.3e-18	78.43	rotamase FKBP 1	[more]
AT5G48570.1	4.8e-18	74.51	FKBP-type peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G48580.1	2.7e-05	56.76	FK506- and rapamycin-binding protein 15 kD-2	[more]
AT3G25220.1	5.2e-04	51.35	FK506-binding protein 15 kD-1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 3..44 e-value: 1.1E-8 score: 35.3
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 1..47 score: 12.013668
None	No IPR available	GENE3D	3.10.50.40		coord: 1..52 e-value: 3.5E-13 score: 51.6
None	No IPR available	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 3..53
None	No IPR available	PANTHER	PTHR10516:SF432	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP62	coord: 3..53
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 3..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026987.1	MELO3C026987.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity