MELO3C026943 (gene) Melon (DHL92) v4

Overview
NameMELO3C026943
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein MNN4-like
Locationchr06: 16596793 .. 16597062 (+)
RNA-Seq ExpressionMELO3C026943
SyntenyMELO3C026943
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCAAGAGGAAAATCCTCTAGCTCTTGTCGTCGCTTTACCTAATCAAACCCTTGCAGTGCCTGACTTAAATAATCCTTCAACTAACCAAGGGGATGTCGAGTTGTACCAAGAAAGTTTTGAAGACTCACTCTGTGATCTATTTACCCCAATTGAAGATAAGATCAAGGATCTAAAAGAAGCATCCCTAGTTCCTGTTAGCAAAGAAGTCTTAGAGAATGCTATTGATGACCCACTCCTCAAGTGTAAAGGATTTCCTATGAGGTAG

mRNA sequence

ATGCGTCAAGAGGAAAATCCTCTAGCTCTTGTCGTCGCTTTACCTAATCAAACCCTTGCAGTGCCTGACTTAAATAATCCTTCAACTAACCAAGGGGATGTCGAGTTGTACCAAGAAAGTTTTGAAGACTCACTCTGTGATCTATTTACCCCAATTGAAGATAAGATCAAGGATCTAAAAGAAGCATCCCTAGTTCCTGTTAGCAAAGAAGTCTTAGAGAATGCTATTGATGACCCACTCCTCAAGTGTAAAGGATTTCCTATGAGGTAG

Coding sequence (CDS)

ATGCGTCAAGAGGAAAATCCTCTAGCTCTTGTCGTCGCTTTACCTAATCAAACCCTTGCAGTGCCTGACTTAAATAATCCTTCAACTAACCAAGGGGATGTCGAGTTGTACCAAGAAAGTTTTGAAGACTCACTCTGTGATCTATTTACCCCAATTGAAGATAAGATCAAGGATCTAAAAGAAGCATCCCTAGTTCCTGTTAGCAAAGAAGTCTTAGAGAATGCTATTGATGACCCACTCCTCAAGTGTAAAGGATTTCCTATGAGGTAG

Protein sequence

MRQEENPLALVVALPNQTLAVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLKEASLVPVSKEVLENAIDDPLLKCKGFPMR
Homology
BLAST of MELO3C026943 vs. NCBI nr
Match: KAA0037287.1 (hypothetical protein E6C27_scaffold68G00220 [Cucumis melo var. makuwa] >TYK05896.1 hypothetical protein E5676_scaffold1085G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 2.9e-41
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0

Query: 1   MRQEENPLALVVALPNQTLAVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLK 60
           MRQEENPLALVVALPNQTL VPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLK
Sbjct: 103 MRQEENPLALVVALPNQTLPVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLK 162

Query: 61  EASLVPVSKEVLENAIDDPLLKCKGFPMR 90
           EASLVPVSKEVLENAIDDPLLKCKGFPMR
Sbjct: 163 EASLVPVSKEVLENAIDDPLLKCKGFPMR 191

BLAST of MELO3C026943 vs. NCBI nr
Match: KAA0053481.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK02124.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 8.4e-09
Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = 0

Query: 1   MRQEENPLALVV-ALPNQTLAVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDL 60
           +RQEENP  LVV  L   T+ +P+LN+   +QGD + +Q+ FEDSL D  T I    KD 
Sbjct: 302 LRQEENPQTLVVDFLDPTTIPIPNLNDSPVDQGD-DAFQDMFEDSLYDPLTLIHKVFKDP 361

Query: 61  KEASLVPV---SKEVLENAIDDPLLKCK 85
            + +L PV   +KEVLE A+DDPLLK K
Sbjct: 362 VDVALSPVGSLNKEVLEKAVDDPLLKGK 388

BLAST of MELO3C026943 vs. NCBI nr
Match: KAA0067817.1 (hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 6.0e-07
Identity = 41/85 (48.24%), Postives = 49/85 (57.65%), Query Frame = 0

Query: 3  QEENPLALVVALPNQTLAVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLKEA 62
          QE+N LAL VA  +QTL  PDLN+P                  C+L  P++D+IKD K+A
Sbjct: 23 QEKNSLALFVASTDQTLPTPDLNDP----------------PYCNLLAPVKDEIKDPKDA 82

Query: 63 SLVPVS---KEVLENAIDDPLLKCK 85
           LVPV    KEVLE  IDD LLK K
Sbjct: 83 PLVPVGSPRKEVLEKNIDDSLLKGK 91

BLAST of MELO3C026943 vs. NCBI nr
Match: KAA0038296.1 (hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 3.9e-06
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 0

Query: 43 DSLCDLFTPIEDKIKDLKEASLVPVS---KEVLENAIDDPLLKCKG 86
          DS+CD FTPIED+IK+L++ SLVPV    KEVLE  +DDPLLK KG
Sbjct: 9  DSVCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKG 54

BLAST of MELO3C026943 vs. NCBI nr
Match: TYK19850.1 (hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-05
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0

Query: 43 DSLCDLFTPIEDKIKDLKEASLVPVS---KEVLENAIDDPLLKCKG 86
          D +CD FTPIED+IK+L++ SLVPV    KEVLE  +DDPLLK KG
Sbjct: 9  DLVCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKG 54

BLAST of MELO3C026943 vs. ExPASy TrEMBL
Match: A0A5D3C6C6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1085G00060 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-41
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0

Query: 1   MRQEENPLALVVALPNQTLAVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLK 60
           MRQEENPLALVVALPNQTL VPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLK
Sbjct: 103 MRQEENPLALVVALPNQTLPVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLK 162

Query: 61  EASLVPVSKEVLENAIDDPLLKCKGFPMR 90
           EASLVPVSKEVLENAIDDPLLKCKGFPMR
Sbjct: 163 EASLVPVSKEVLENAIDDPLLKCKGFPMR 191

BLAST of MELO3C026943 vs. ExPASy TrEMBL
Match: A0A5D3BSJ3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16540G00050 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.1e-09
Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = 0

Query: 1   MRQEENPLALVV-ALPNQTLAVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDL 60
           +RQEENP  LVV  L   T+ +P+LN+   +QGD + +Q+ FEDSL D  T I    KD 
Sbjct: 302 LRQEENPQTLVVDFLDPTTIPIPNLNDSPVDQGD-DAFQDMFEDSLYDPLTLIHKVFKDP 361

Query: 61  KEASLVPV---SKEVLENAIDDPLLKCK 85
            + +L PV   +KEVLE A+DDPLLK K
Sbjct: 362 VDVALSPVGSLNKEVLEKAVDDPLLKGK 388

BLAST of MELO3C026943 vs. ExPASy TrEMBL
Match: A0A5A7VKU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00210 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07
Identity = 41/85 (48.24%), Postives = 49/85 (57.65%), Query Frame = 0

Query: 3  QEENPLALVVALPNQTLAVPDLNNPSTNQGDVELYQESFEDSLCDLFTPIEDKIKDLKEA 62
          QE+N LAL VA  +QTL  PDLN+P                  C+L  P++D+IKD K+A
Sbjct: 23 QEKNSLALFVASTDQTLPTPDLNDP----------------PYCNLLAPVKDEIKDPKDA 82

Query: 63 SLVPVS---KEVLENAIDDPLLKCK 85
           LVPV    KEVLE  IDD LLK K
Sbjct: 83 PLVPVGSPRKEVLEKNIDDSLLKGK 91

BLAST of MELO3C026943 vs. ExPASy TrEMBL
Match: A0A5A7T7V1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001610 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-06
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 0

Query: 43 DSLCDLFTPIEDKIKDLKEASLVPVS---KEVLENAIDDPLLKCKG 86
          DS+CD FTPIED+IK+L++ SLVPV    KEVLE  +DDPLLK KG
Sbjct: 9  DSVCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKG 54

BLAST of MELO3C026943 vs. ExPASy TrEMBL
Match: A0A5D3D8Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00610 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.4e-06
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0

Query: 43 DSLCDLFTPIEDKIKDLKEASLVPVS---KEVLENAIDDPLLKCKG 86
          D +CD FTPIED+IK+L++ SLVPV    KEVLE  +DDPLLK KG
Sbjct: 9  DLVCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKG 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0037287.12.9e-4198.88hypothetical protein E6C27_scaffold68G00220 [Cucumis melo var. makuwa] >TYK05896... [more]
KAA0053481.18.4e-0950.00protein MNN4-like [Cucumis melo var. makuwa] >TYK02124.1 protein MNN4-like [Cucu... [more]
KAA0067817.16.0e-0748.24hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa][more]
KAA0038296.13.9e-0667.39hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa][more]
TYK19850.11.9e-0565.22hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C6C61.4e-4198.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BSJ34.1e-0950.00Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16540G... [more]
A0A5A7VKU12.9e-0748.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7T7V11.9e-0667.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D8Q59.4e-0665.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026943.1MELO3C026943.1mRNA