MELO3C026611 (gene) Melon (DHL92) v4

Overview
NameMELO3C026611
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr04: 25772024 .. 25772350 (+)
RNA-Seq ExpressionMELO3C026611
SyntenyMELO3C026611
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACTCGACGACTGGGAACTCCTCGATTGCCACGAAGATCGTGAAGAGAAAAGCAGGCACGAAAACGAAGTAATTTCCGGCCAGAAGTTGATCGCCGACACGAAAAAGGAGTTGGAAATCGTCGCGGAGTTTGAGGTGGAGGAAGAGGAAAAGGAGAATTCAAGACGAGGGATGGATATGGCGACGGAGAAAAAGAAACAACGGGGGAGAGCGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATTTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGTTGA

mRNA sequence

ATGGGACTCGACGACTGGGAACTCCTCGATTGCCACGAAGATCGTGAAGAGAAAAGCAGGCACGAAAACGAAGTAATTTCCGGCCAGAAGTTGATCGCCGACACGAAAAAGGAGTTGGAAATCGTCGCGGAGTTTGAGGTGGAGGAAGAGGAAAAGGAGAATTCAAGACGAGGGATGGATATGGCGACGGAGAAAAAGAAACAACGGGGGAGAGCGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATTTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGTTGA

Coding sequence (CDS)

ATGGGACTCGACGACTGGGAACTCCTCGATTGCCACGAAGATCGTGAAGAGAAAAGCAGGCACGAAAACGAAGTAATTTCCGGCCAGAAGTTGATCGCCGACACGAAAAAGGAGTTGGAAATCGTCGCGGAGTTTGAGGTGGAGGAAGAGGAAAAGGAGAATTCAAGACGAGGGATGGATATGGCGACGGAGAAAAAGAAACAACGGGGGAGAGCGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATTTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGTTGA

Protein sequence

MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMDMATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Homology
[Close]
BLAST of MELO3C026611 vs. NCBI nr
Match: KAA0057194.1 (hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa] >TYK18767.1 hypothetical protein E5676_scaffold257G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 214.5 bits (545), Expect = 4.4e-52
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60
           MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD
Sbjct: 1   MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60

Query: 61  MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 109
           MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Sbjct: 61  MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 108

[Close]
BLAST of MELO3C026611 vs. NCBI nr
Match: KGN59752.1 (hypothetical protein Csa_001232 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40
Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0 

Query: 1   MGLDDWELLDCHEDR-EEKSR-HENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRG 60
           MGLDDWELLDCHED  +EKSR HEN VISGQKLI DTK E+E VAEF+VEEEEK +SR G
Sbjct: 1   MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGG 60

Query: 61  MDMATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 109
           MDMA EK+KQ GR VVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Sbjct: 61  MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 110

[Close]
BLAST of MELO3C026611 vs. ExPASy TrEMBL
Match: A0A5D3D5E0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00740 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.1e-52
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60
           MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD
Sbjct: 1   MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60

Query: 61  MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 109
           MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Sbjct: 61  MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 108

[Close]
BLAST of MELO3C026611 vs. ExPASy TrEMBL
Match: A0A0A0LG95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842740 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.9e-41
Identity = 93/110 (84.55%), Postives = 98/110 (89.09%), Query Frame = 0 

Query: 1   MGLDDWELLDCHEDR-EEKSR-HENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRG 60
           MGLDDWELLDCHED  +EKSR HEN VISGQKLI DTK E+E VAEF+VEEEEK +SR G
Sbjct: 1   MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGG 60

Query: 61  MDMATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 109
           MDMA EK+KQ GR VVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC
Sbjct: 61  MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGGAFVNKRHC 110

The following BLAST results are available for this feature:
BLAST of MELO3C026611 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0057194.14.4e-52100.00hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa] >TYK1876... [more]
KGN59752.11.0e-4084.55hypothetical protein Csa_001232 [Cucumis sativus][more]
BLAST of MELO3C026611 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C026611 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D5E02.1e-52100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LG954.9e-4184.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842740 PE=4 SV=1[more]
BLAST of MELO3C026611 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026611.1MELO3C026611.1mRNA