MELO3C026481 (gene) Melon (DHL92) v4

Overview
NameMELO3C026481
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionExo_endo_phos domain-containing protein/DUF4283 domain-containing protein
Locationchr10: 24666995 .. 24667369 (-)
RNA-Seq ExpressionMELO3C026481
SyntenyMELO3C026481
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAGTTTACCTTTGACTCAGTGGGTGCATTAAATGGGTCGTCAAGTGATGGTCGGCTTGTTAGTGGCTCGAAGGAGAGTAAAACTCTTCTCAATGTGGGTTGTCAACTTGGCCGCTCATGGTTTCTAACAGTTTTGTCTTCTAAACTTGGTTGTCCACGACAAAAGGATTATGGATTACGTCTTAGTGATACTTCTAGTACTTCAAATGGGCATGTGGAGATAGGTGTGCCATCAACCACATCTTCATGGGCTTCCTTATTTGGCTCGGTTCATAATTCTTCTATTCAATATACTTCTCCCACTACTGTTGGATCAAAGGTTGTGGTTACCCCGCTTGAGGAGGTTGATGCTCAAGGAGTCAAGGTTTAG

mRNA sequence

ATGGGAGAGTTTACCTTTGACTCAGTGGGTGCATTAAATGGGTCGTCAAGTGATGGTCGGCTTGTTAGTGGCTCGAAGGAGAGTAAAACTCTTCTCAATGTGGGTTGTCAACTTGGCCGCTCATGGTTTCTAACAGTTTTGTCTTCTAAACTTGGTTGTCCACGACAAAAGGATTATGGATTACGTCTTAGTGATACTTCTAGTACTTCAAATGGGCATGTGGAGATAGGTGTGCCATCAACCACATCTTCATGGGCTTCCTTATTTGGCTCGGTTCATAATTCTTCTATTCAATATACTTCTCCCACTACTGTTGGATCAAAGGTTGTGGTTACCCCGCTTGAGGAGGTTGATGCTCAAGGAGTCAAGGTTTAG

Coding sequence (CDS)

ATGGGAGAGTTTACCTTTGACTCAGTGGGTGCATTAAATGGGTCGTCAAGTGATGGTCGGCTTGTTAGTGGCTCGAAGGAGAGTAAAACTCTTCTCAATGTGGGTTGTCAACTTGGCCGCTCATGGTTTCTAACAGTTTTGTCTTCTAAACTTGGTTGTCCACGACAAAAGGATTATGGATTACGTCTTAGTGATACTTCTAGTACTTCAAATGGGCATGTGGAGATAGGTGTGCCATCAACCACATCTTCATGGGCTTCCTTATTTGGCTCGGTTCATAATTCTTCTATTCAATATACTTCTCCCACTACTGTTGGATCAAAGGTTGTGGTTACCCCGCTTGAGGAGGTTGATGCTCAAGGAGTCAAGGTTTAG

Protein sequence

MGEFTFDSVGALNGSSSDGRLVSGSKESKTLLNVGCQLGRSWFLTVLSSKLGCPRQKDYGLRLSDTSSTSNGHVEIGVPSTTSSWASLFGSVHNSSIQYTSPTTVGSKVVVTPLEEVDAQGVKV
Homology
[Close]
BLAST of MELO3C026481 vs. NCBI nr
Match: KAA0065430.1 (uncharacterized protein E6C27_scaffold17G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 241.9 bits (616), Expect = 2.9e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MGEFTFDSVGALNGSSSDGRLVSGSKESKTLLNVGCQLGRSWFLTVLSSKLGCPRQKDYG 60
           MGEFTFDSVGALNGSSSDGRLVSGSKESKTLLNVGCQLGRSWFLTVLSSKLGCPRQKDYG
Sbjct: 1   MGEFTFDSVGALNGSSSDGRLVSGSKESKTLLNVGCQLGRSWFLTVLSSKLGCPRQKDYG 60

Query: 61  LRLSDTSSTSNGHVEIGVPSTTSSWASLFGSVHNSSIQYTSPTTVGSKVVVTPLEEVDAQ 120
           LRLSDTSSTSNGHVEIGVPSTTSSWASLFGSVHNSSIQYTSPTTVGSKVVVTPLEEVDAQ
Sbjct: 61  LRLSDTSSTSNGHVEIGVPSTTSSWASLFGSVHNSSIQYTSPTTVGSKVVVTPLEEVDAQ 120

Query: 121 GVKV 125
           GVKV
Sbjct: 121 GVKV 124

[Close]
BLAST of MELO3C026481 vs. NCBI nr
Match: KAA0060724.1 (hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 8.7e-04
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0 

Query: 37  QLGRSWFLTVLSSKLGCPRQKDYGLRLSDTSSTSNGHVEIGVPSTT---SSWASLFGSVH 96
           ++G+S   + L+S  G P   D G+     S   + +V    P TT   S+WASLFG+  
Sbjct: 96  EIGKSGGSSELNS--GRPVSTDQGISFGSISKNLSVNVVENGPKTTGSNSTWASLFGTSP 155

Query: 97  NSSIQYTSPTTVGSKVVVTPLEEVDAQGVKV 125
           + S+ YT P T+G  ++V P EEV AQ ++V
Sbjct: 156 DGSLPYTQPKTIGDNIIVVPSEEVIAQNIRV 184

[Close]
BLAST of MELO3C026481 vs. ExPASy TrEMBL
Match: A0A5A7VE13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001080 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MGEFTFDSVGALNGSSSDGRLVSGSKESKTLLNVGCQLGRSWFLTVLSSKLGCPRQKDYG 60
           MGEFTFDSVGALNGSSSDGRLVSGSKESKTLLNVGCQLGRSWFLTVLSSKLGCPRQKDYG
Sbjct: 1   MGEFTFDSVGALNGSSSDGRLVSGSKESKTLLNVGCQLGRSWFLTVLSSKLGCPRQKDYG 60

Query: 61  LRLSDTSSTSNGHVEIGVPSTTSSWASLFGSVHNSSIQYTSPTTVGSKVVVTPLEEVDAQ 120
           LRLSDTSSTSNGHVEIGVPSTTSSWASLFGSVHNSSIQYTSPTTVGSKVVVTPLEEVDAQ
Sbjct: 61  LRLSDTSSTSNGHVEIGVPSTTSSWASLFGSVHNSSIQYTSPTTVGSKVVVTPLEEVDAQ 120

Query: 121 GVKV 125
           GVKV
Sbjct: 121 GVKV 124

[Close]
BLAST of MELO3C026481 vs. ExPASy TrEMBL
Match: A0A5A7V084 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00100 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.2e-04
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0 

Query: 37  QLGRSWFLTVLSSKLGCPRQKDYGLRLSDTSSTSNGHVEIGVPSTT---SSWASLFGSVH 96
           ++G+S   + L+S  G P   D G+     S   + +V    P TT   S+WASLFG+  
Sbjct: 96  EIGKSGGSSELNS--GRPVSTDQGISFGSISKNLSVNVVENGPKTTGSNSTWASLFGTSP 155

Query: 97  NSSIQYTSPTTVGSKVVVTPLEEVDAQGVKV 125
           + S+ YT P T+G  ++V P EEV AQ ++V
Sbjct: 156 DGSLPYTQPKTIGDNIIVVPSEEVIAQNIRV 184

The following BLAST results are available for this feature:
BLAST of MELO3C026481 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065430.12.9e-60100.00uncharacterized protein E6C27_scaffold17G001080 [Cucumis melo var. makuwa][more]
KAA0060724.18.7e-0437.36hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa] >TYK01466... [more]
BLAST of MELO3C026481 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C026481 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VE131.4e-60100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V0844.2e-0437.36Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cuc... [more]
BLAST of MELO3C026481 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C026481.1MELO3C026481.1mRNA