MELO3C026462 (gene) Melon (DHL92) v4

Overview


Name	MELO3C026462
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	calmodulin-like
Location	chr10: 24375581 .. 24376280 (+)
RNA-Seq Expression	MELO3C026462
Synteny	MELO3C026462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTTTTGTAGAAAGAAATACAAGGTTACTATAGGCTATAGCCATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAGTGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAAACTTTTACCCAATTTTCCCATGTGTTTCAGATGTGATATATAGGTGAACTTCAAACCATTACTAAAATTAAATAAATATTTAAACACATATGTAAAATAATAGTATATTTGAAATTAAAATTACCGTTTCTTTTGAAC

mRNA sequence

AAAACTTTTTGTAGAAAGAAATACAAGGTTACTATAGGCTATAGCCATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAGTGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAAACTTTTACCCAATTTTCCCATGTGTTTCAGATGTGATATATAGGTGAACTTCAAACCATTACTAAAATTAAATAAATATTTAAACACATATGTAAAATAATAGTATATTTGAAATTAAAATTACCGTTTCTTTTGAAC

Coding sequence (CDS)

ATGTACATCTCCAAACTTCAAGCTTCCATGGCTATGTATGAAGCAAGGATGTTTATCAAGCACTATGAAAAAGATGGTGATGCTGTTCAAGTAAAAGGTTTCAATGATGTTCGAAGTTCAACGCAAATTGGTTATCAAGGAATTGTACCCAAAATCCTAAAGTCTAGTGACGATGTTGCACACAAGCTTAGTTTAGAAGCTCATATACAACCAACTCAGCAAACTGGAGGAAAGGGTAAAAAGTCCATCGCAAGGGCTCTTGACATAAAGTCATCTAATATGTCATTTAGTCGACAGCAAATAAAGGAAATTTTTCGATATCATGATAACAACAATGATGGGTTTCTTAACATAGTGGAACTCACTAAAGCTTTCGCATTTTTAGGCTCAATGTTTCCATTTTACAAAGCTTGCTACGGAATGGTATATGCGGATGCAAATGCAGATGGTCTTATCAGTGAAGCTGAGCTCGACAAACTCATTGATTATGCGACTAAAATTATCAAGAAGAAATAA

Protein sequence

MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK

Homology

[Close]

BLAST of MELO3C026462 vs. NCBI nr
Match: KAA0065465.1 (putative calcium-binding protein CML11 [Cucumis melo var. makuwa])

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
           MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA
Sbjct: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60

Query: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
           HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE
Sbjct: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120

Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171

[Close]

BLAST of MELO3C026462 vs. NCBI nr
Match: KAE8648233.1 (hypothetical protein Csa_018371 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 6.7e-63
Identity = 128/155 (82.58%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 10  MAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVAHKLSLEAHI 69
           MAMYEA M IK YEK+GDAV+VK F+DVRSSTQIG +  V KILK SD VAHKL  EAHI
Sbjct: 1   MAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVAHKLRSEAHI 60

Query: 70  QPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVELTKAFAFLG 129
           QPTQ+TGGKGKKSI R LD KSSNMS SR++IKEIF+YHDNNNDGFLN +ELTKAFAFLG
Sbjct: 61  QPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFLG 120

Query: 130 SMFPFYKACYGMVYADANADGLISEAELDKLIDYA 165
           SMFPFYKACYGMVYADAN DGLISEAELDKLIDYA
Sbjct: 121 SMFPFYKACYGMVYADANEDGLISEAELDKLIDYA 155

[Close]

BLAST of MELO3C026462 vs. NCBI nr
Match: XP_022930007.1 (uncharacterized protein LOC111436449 [Cucurbita moschata])

HSP 1 Score: 182.6 bits (462), Expect = 2.9e-42
Identity = 100/172 (58.14%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+ISKLQASMA YEA   IK Y ++GD VQ+K F+D+ R STQ+  QG +P+ILK + +V
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIV 120
             KLS  AH                     K+S + FSR+Q+KEIF+YHD++ DGFLN+ 
Sbjct: 61  GLKLSSNAH--------------------PKTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of MELO3C026462 vs. NCBI nr
Match: XP_023530717.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.8 bits (460), Expect = 5.0e-42
Identity = 100/172 (58.14%), Postives = 120/172 (69.77%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+ISKLQASMA YEA   IK Y ++GD VQ+K F+ + R STQ+  QG +P+ILK + +V
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSGIARDSTQLNNQGKIPEILKDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIV 120
             KLS  AH                     K+S + FSR+Q+KEIFRYHD++ DGFLN+ 
Sbjct: 61  GLKLSSNAH--------------------PKTSKLQFSREQMKEIFRYHDSDKDGFLNLR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of MELO3C026462 vs. NCBI nr
Match: XP_022930012.1 (calmodulin-2/4-like [Cucurbita moschata])

HSP 1 Score: 181.0 bits (458), Expect = 8.5e-42
Identity = 99/172 (57.56%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+I KLQASMA YEA   IK   ++GD VQ+K FN + R+STQ+  Q +VP+IL+ + +V
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVNNQSMVPEILRDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIV 120
             K S   H                    +K+SNM FSR+Q+KEIFRYHD++ DGFLNI 
Sbjct: 61  GPKFSSNTH--------------------LKASNMQFSREQMKEIFRYHDSDKDGFLNIR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKL+DYA K IKKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

[Close]

BLAST of MELO3C026462 vs. ExPASy TrEMBL
Match: A0A5A7VI66 (Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001550 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 5.9e-89
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
           MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA
Sbjct: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60

Query: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
           HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE
Sbjct: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120

Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 171

[Close]

BLAST of MELO3C026462 vs. ExPASy TrEMBL
Match: A0A0A0KMQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.5e-71
Identity = 143/171 (83.63%), Postives = 153/171 (89.47%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDVRSSTQIGYQGIVPKILKSSDDVA 60
           MYISKLQASMAMYEA M IK YEK+GDAV+VK F+DVRSSTQIG +  V KILK SD VA
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDDVRSSTQIGNRESVLKILKPSDGVA 60

Query: 61  HKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIVE 120
           HKL  EAHIQPTQ+TGGKGKKSI R LD KSSNMS SR++IKEIF+YHDNNNDGFLN +E
Sbjct: 61  HKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRME 120

Query: 121 LTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           LTKAFAFLGSMFPFYKACYGMVYADAN DGLISEAELDKLIDYA+KIIKKK
Sbjct: 121 LTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of MELO3C026462 vs. ExPASy TrEMBL
Match: A0A6J1EP67 (uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC111436449 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.4e-42
Identity = 100/172 (58.14%), Postives = 121/172 (70.35%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+ISKLQASMA YEA   IK Y ++GD VQ+K F+D+ R STQ+  QG +P+ILK + +V
Sbjct: 1   MFISKLQASMAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIV 120
             KLS  AH                     K+S + FSR+Q+KEIF+YHD++ DGFLN+ 
Sbjct: 61  GLKLSSNAH--------------------PKTSKLQFSREQMKEIFKYHDSDKDGFLNLR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKLIDYA K +KKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK 152

[Close]

BLAST of MELO3C026462 vs. ExPASy TrEMBL
Match: A0A0A0KLF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.1e-42
Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFND-VRSSTQIG-YQGIVPKILKSSDD 60
           M+I +LQ S A YEA   +K YE++G+ V +  FND  R STQI   + +  K LK +DD
Sbjct: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87

Query: 61  VAHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNI 120
           VAHKLS  A ++   Q  GK +  I R  D K+SNM FSR+QIKEIF+Y+D++ DGFLNI
Sbjct: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147

Query: 121 VELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
            E+TKAFA LGS+FPF KA +GMVYAD N DGLI E ELDKLI+YA K +KKK
Sbjct: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]

BLAST of MELO3C026462 vs. ExPASy TrEMBL
Match: A0A6J1EP72 (calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.1e-42
Identity = 99/172 (57.56%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 1   MYISKLQASMAMYEARMFIKHYEKDGDAVQVKGFNDV-RSSTQIGYQGIVPKILKSSDDV 60
           M+I KLQASMA YEA   IK   ++GD VQ+K FN + R+STQ+  Q +VP+IL+ + +V
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVNNQSMVPEILRDNKNV 60

Query: 61  AHKLSLEAHIQPTQQTGGKGKKSIARALDIKSSNMSFSRQQIKEIFRYHDNNNDGFLNIV 120
             K S   H                    +K+SNM FSR+Q+KEIFRYHD++ DGFLNI 
Sbjct: 61  GPKFSSNTH--------------------LKASNMQFSREQMKEIFRYHDSDKDGFLNIR 120

Query: 121 ELTKAFAFLGSMFPFYKACYGMVYADANADGLISEAELDKLIDYATKIIKKK 172
           ELTKAFAFLGS+ PF KA YGM YADAN DGLISEAELDKL+DYA K IKKK
Sbjct: 121 ELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

The following BLAST results are available for this feature:

BLAST of MELO3C026462 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065465.1	1.2e-88	100.00	putative calcium-binding protein CML11 [Cucumis melo var. makuwa]	[more]
KAE8648233.1	6.7e-63	82.58	hypothetical protein Csa_018371 [Cucumis sativus]	[more]
XP_022930007.1	2.9e-42	58.14	uncharacterized protein LOC111436449 [Cucurbita moschata]	[more]
XP_023530717.1	5.0e-42	58.14	calmodulin-2/4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930012.1	8.5e-42	57.56	calmodulin-2/4-like [Cucurbita moschata]	[more]

BLAST of MELO3C026462 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C026462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VI66	5.9e-89	100.00	Putative calcium-binding protein CML11 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KMQ1	5.5e-71	83.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1	[more]
A0A6J1EP67	1.4e-42	58.14	uncharacterized protein LOC111436449 OS=Cucurbita moschata OX=3662 GN=LOC1114364...	[more]
A0A0A0KLF3	4.1e-42	57.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1	[more]
A0A6J1EP72	4.1e-42	57.56	calmodulin-2/4-like OS=Cucurbita moschata OX=3662 GN=LOC111436455 PE=4 SV=1	[more]

BLAST of MELO3C026462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 101..127 e-value: 2.1E-5 score: 24.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 96..131 score: 12.002819
None	No IPR available	GENE3D	1.10.238.10		coord: 34..166 e-value: 3.2E-8 score: 35.7
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 109..121
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 145..157
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 93..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026462.1	MELO3C026462.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding