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MELO3C026456 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAACAAACACTTATTGGAGTCCTTACTGCATTCACATTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGAAGCTTGCTTACTTTTGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTTGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTATGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGAGCATCATAGAAGTTCACTATAATTGACCTTTACGTACATCGCACTTAATTCAACGTGTTTCTTTCAACCTGTAGAACTGCCTTGGCGCATTAGACGGGACTTACATAAAGGTCAACGTCCTCGCAGGAGATTGGCCTACTTTCAGAACGCGTAAGGGAGAAATTACCACAAACGTTCTGGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATCTTCTTTATAATAAAACACCGTCGCTTCCTACTTACCTATTTAAAGTTCATAAACAAACCATTTAATAACAGGATATTATTATCTGTGCGATGCGGGATATCCAAACGCGGAGGGGTTTCTCGCCCCCGTACAGAGGCCAGCGGTACCATTTGCAAGAGTGGCGTGGTGCTGCAAATGCGCCAACAAATGCAAAGGAGTACTTCAACATGAAGCACTCCTCCGCAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTAAAGGGTCGTTGGGCCATTCTTCGTGGAAAGTCATACTATCCCCTGCAAGTCCAGTGTCGCACCATTCTAGCATGTGCCTTGCTTCACAATTTGATCAACAGGGAAATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGAGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGGATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAGCTAAGACAAATTTAGATAACAAGTTTTCGATGAGTTCGTCCCAATTCTATCGTGTCTAACATGTACTGTAAAAACTAATATGGGTTGTTGCATATGAATTGTACGCGTGCCATAATTTGTATCATGCCTATTTTATTTTGGAGTTTAATGGTGAAATTACTTACGTACTCCATGTATTTTTTCTAATTTCTCATTCTCAGTATGTCAACCTCAAATCGTGCCCCGAGACATGTTTAGACGAAGGAGGAGGAGGGGACTCTTGTGGAATGTTTGATGGAGCTAGTGTCAATGGGGGGATGGAAATCAGATAATGGTACGTTCCGACCAGGATACCTTGCGCAATTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTGAAGCGAACGTTCCAGGCCATTGCCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCGTTGCGGAGAAGGAATTATTTGATAATTGGGTTAGGGTATGAAATATAATTTAAACGTGACACAATGTTCACAATGTACATAGTTAACAATTTTTCAATTAGTACTCATACGTGATTTTTTTTTGTGCCCGCAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTATTTGGTCGCGATAGGGCGACCGGTCGGTTCGCTGAGACATTCGCGGACGTGGGGTCTAACGAGCCTGGTGGCGGATATGACAGATTTGATATGGGGGATGGAAACGAGGACTTCCAGCCCGTGTACAGCCAGGGAGTTGACATCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGCGCTTCAGAGGGTAGGATCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTTAGCGAGACTTCAAGCTTGAAGCGATACATCTGGGGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCAGCATGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCCGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGGGAGGGATTCTGTAGAGTCCTCCTACGAGACATAGAGAGATAGTTTCTGTTTCTACTGACCTGGGTTGCTTATTATTTCCTTACGTTTTTTTCTGTATGATGTTGACTATTTATGCATTTTCTATTATCAAGAACTTCTTTTCCTCATTGATAATGTTTATTTTAAATGAAGGAAAATAGTCACAATTTTCCAAAAGCGTTATAACGGCTATTTATATAGGTTTAAAATTGGATGACTTCGCTATCACCGATAAATATTGAATAATTTTTTTATCTTTATAAAAAATTAATTGTAATAAATTTATCACAATATGTTCACAAATTTATTTTAATTTGGGCAACTGTATGTATTAATTTAATAACATTACACATACAACAAATAAAATAGGAGAATAAGACGGATTCGAGGGTTTCGTAAAAAAATATGCAATAATTTTTTATGATATTTACAATTTAATTTAAAAATATTATACCACATAAAAAATCAATTAACCCAACCCATTTAACAATTTTCCTAAATAAAATTTATCACAAAATCCACATAAACCTACCCACCTAACCCTTCCCCCAAACACATCTTATCATAAAATCCCCATTAATCCTCCCCACCTAACCCTTCCCCCAAACACATTTTATCATAAAATCCTCATTAACTCTTCCCACCTAACCCTTCCCCCAATCACATATTATCATAAAACTACCTTTTTAAACCCTTCCCCCAAACAAAGGTTATGATAAAACTAGGTTTAACTTAACACTAGTTTTATCTTAACACTAACCCTTCCCTAAATTAACCCTTCCCCCAAACGCACCCTAAAGGTTGAATGATGGGTTTCGTAAGGAGTGATAGGATCACACCACTGTTTCTAGATATGCATACTAAACTTACCCTATTGCCTGCTTCGCACTTTTCTTATGTAGTTCTTTCACAAACTCATTCTATTTATTAGTAATCTTTTCGCATAGTATTTTTTTTTGCAGGGCTCTTATAGTTTTGGTAGTATGTGTTCGGGTCCTCAGTACTCTACTAAGAGTGTTAATGCATACAAGTTGCCATTATGAAAAGTACTAAACATGCCAGAGCGGAACCTTGACACATGACTCTCCAATTATGTGAAAGCTGATTTTAGCCGTATGGATTATCATGCAAGAGCTGATTTTTGTCGCATTAAGTATCACTCGAGAGCTAATTTTGCTGCATGACCTTAGCATGCGAGAGCTAACTTCAGTTGCTTGATTCTACCTTGTGGAAGCTAACTTTAGTCGCATGATTTATCATGGGTGAGTTATGTTCAATCGTGTGTTTGAATACCTTGTTATGATAGTTCTTGTAATATGTATTTTTAATCCTTGGAATTAAGTCCTAGTTAAGTTGTTGTGTTCTTGACAATTGCATGGTTATGCCCTCATAGATGAGAAGGTTGAGCTAAAATCTAAAGTTATCTTGTACGAAGCAGAATACACTATATTAAGAATAGGGAGATGACGAGCTAGATGGCAGAATGTTACCGAGCCTACAATGGATATGGAAGCTTGCTCCATCAATCAAGATGCGAGAAGAGAAAGAAATGAGGCACTGCTTAAGAGAGCTGCTCAAGCAACGGGTAAAGCGGGTAAGCAGTTTAGTGTTGAAAGACTGAAGGTGTTGGGAGCTAAGGTCTTTGAAGAGACCATAAATCTGGTGGATGCAGAGAAGTGATTGAGTTTGGTTGAGAATTGTTTTGGAGTAATGAAGTGTCCTGACGAAAGGAAGGTAAAGCTAGCAACGTTCTTGTTGCAAGGAAATGTCGAGGATTGGTGGATCCTGTATGCACCAAGAGTAGGAGGAGTAGACTTCATTACTTAA ATGGATGAACAAACACTTATTGGAGTCCTTACTGCATTCACATTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGAAGCTTGCTTACTTTTGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTTGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTATGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGAACTGCCTTGGCGCATTAGACGGGACTTACATAAAGGTCAACGTCCTCGCAGGAGATTGGCCTACTTTCAGAACGCGTAAGGGAGAAATTACCACAAACGTTCTGGGGGGCTCTTATAGTTTTGGTAGTATGTGTTCGGGTCCTCAGTACTCTACTAAGAGTGGAGATGACGAGCTAGATGGCAGAATGTTACCGAGCCTACAATGGATATGGAAGCTTGCTCCATCAATCAAGATGCGAGAAGAGAAAGAAATGAGGCACTGCTTAAGAGAGCTGCTCAAGCAACGGGTAAAGCGGTGTCCTGACGAAAGGAAGGTAAAGCTAGCAACGTTCTTGTTGCAAGGAAATGTCGAGGATTGGTGGATCCTGTATGCACCAAGAGTAGGAGGAGTAGACTTCATTACTTAA ATGGATGAACAAACACTTATTGGAGTCCTTACTGCATTCACATTGGCCCAACGTCAGATTTTACTAACGTTGGAGCTATTAATGAACAACAATAAGCGTCTCCCACATACACCGCCCGATACACGCCATAGAATTAGGAAGCTTGCTTACTTTTGCATGATACACGAGTCAGATCTTGTGTGTCGGCAAAGCACGCGGATGGATAGGCGAACATTCGCAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCTTCAACTGAAATTGTTGATGTTGAGGAAATGGTAGCAATGTTCTTGCACGTCCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTATGGTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGAACTGCCTTGGCGCATTAGACGGGACTTACATAAAGGTCAACGTCCTCGCAGGAGATTGGCCTACTTTCAGAACGCGTAAGGGAGAAATTACCACAAACGTTCTGGGGGGCTCTTATAGTTTTGGTAGTATGTGTTCGGGTCCTCAGTACTCTACTAAGAGTGGAGATGACGAGCTAGATGGCAGAATGTTACCGAGCCTACAATGGATATGGAAGCTTGCTCCATCAATCAAGATGCGAGAAGAGAAAGAAATGAGGCACTGCTTAAGAGAGCTGCTCAAGCAACGGGTAAAGCGGTGTCCTGACGAAAGGAAGGTAAAGCTAGCAACGTTCTTGTTGCAAGGAAATGTCGAGGATTGGTGGATCCTGTATGCACCAAGAGTAGGAGGAGTAGACTTCATTACTTAA MDEQTLIGVLTAFTLAQRQILLTLELLMNNNKRLPHTPPDTRHRIRKLAYFCMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQREFVWSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVLAGDWPTFRTRKGEITTNVLGGSYSFGSMCSGPQYSTKSGDDELDGRMLPSLQWIWKLAPSIKMREEKEMRHCLRELLKQRVKRCPDERKVKLATFLLQGNVEDWWILYAPRVGGVDFIT Homology
BLAST of MELO3C026456 vs. NCBI nr
Match: KAA0058874.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 381.3 bits (978), Expect = 7.4e-102 Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0
BLAST of MELO3C026456 vs. NCBI nr
Match: KAA0065478.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 359.0 bits (920), Expect = 4.0e-95 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of MELO3C026456 vs. NCBI nr
Match: KAA0043030.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 339.7 bits (870), Expect = 2.5e-89 Identity = 168/198 (84.85%), Postives = 180/198 (90.91%), Query Frame = 0
BLAST of MELO3C026456 vs. NCBI nr
Match: TYK00155.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 338.6 bits (867), Expect = 5.5e-89 Identity = 164/171 (95.91%), Postives = 165/171 (96.49%), Query Frame = 0
BLAST of MELO3C026456 vs. NCBI nr
Match: KAA0035776.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 338.2 bits (866), Expect = 7.2e-89 Identity = 164/171 (95.91%), Postives = 166/171 (97.08%), Query Frame = 0
BLAST of MELO3C026456 vs. ExPASy TrEMBL
Match: A0A5A7UUT3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00380 PE=3 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 3.6e-102 Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0
BLAST of MELO3C026456 vs. ExPASy TrEMBL
Match: A0A5A7VCW6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001770 PE=3 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.9e-95 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of MELO3C026456 vs. ExPASy TrEMBL
Match: A0A5A7TI78 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G001100 PE=3 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 1.2e-89 Identity = 168/198 (84.85%), Postives = 180/198 (90.91%), Query Frame = 0
BLAST of MELO3C026456 vs. ExPASy TrEMBL
Match: A0A5D3BM56 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00450 PE=3 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 2.7e-89 Identity = 164/171 (95.91%), Postives = 165/171 (96.49%), Query Frame = 0
BLAST of MELO3C026456 vs. ExPASy TrEMBL
Match: A0A5A7T0N7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00590 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 3.5e-89 Identity = 164/171 (95.91%), Postives = 166/171 (97.08%), Query Frame = 0
BLAST of MELO3C026456 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 91.3 bits (225), Expect = 1.4e-18 Identity = 49/140 (35.00%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of MELO3C026456 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 7.4e-07 Identity = 31/91 (34.07%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of MELO3C026456 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 1.0e-03 Identity = 17/37 (45.95%), Postives = 26/37 (70.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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