MELO3C026405 (gene) Melon (DHL92) v4

Overview


Name	MELO3C026405
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Enzymatic polyprotein
Location	chr07: 6001809 .. 6002695 (-)
RNA-Seq Expression	MELO3C026405
Synteny	MELO3C026405

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATGTGTTAATCTCTGCACAGAGAATAAACACACGACGAAGGTGATCAAAGATTCTGACTATTGGAAAGAACTCGGCACCTTCTGCAAACAATATGGTCTATCTCAAGGACCAAAGGAAGAGAAGAAGAAGAAAAAGAAAAGGTACTCTTCCAAAAAATTCTTTAGAAAAGGCAAGTTAAAGATCAAGAGTCTCCTCAAAGAAGAAGGCATCATTACTACAAGGGCAAAGGCAAGAAGAAATACTCTTCGAAGACCAATACGATATGCTTCAAATGCAATCAGAAAGGTCACTATGCAAACCGTTGTCCCCTAAAGGATAAAATCAATGCCCTAACAATAGATGAAGAGACAAAGCAATCCCTTCTTTACGCCATAAGAACGGATGATGATACCTCCTCTCAAACGGAGTCTTCATCGGAGGAAGACTATATCAATATTCTTCAAGAAGAAGGGTTCTCTTCTGAAGAGGAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAAGATCAAGAAACTCTTTTTGACCTCATCGAGCAGATCCCTGATGAAGAAGCAAAAAGAACTTGCCTCCTCAAATTAAAGCAAAGTTTAGAAGAACAAGTGCCTCAAAAGACGATTCAAAATCCGATTATGTATTCGTACCAAGACATACTGAATCGGGTAAAGGGCCAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAAATCCTCAAGAGAGAAGTTGCTGAAAACAAACAACGACTCATCTACCTTGAAAATGCATTTCAAGCCTTCCAAGAATCCCAAGTTTTGAAAGAAAATTAA

mRNA sequence

ATGATATGTGTTAATCTCTGCACAGAGAATAAACACACGACGAAGGTGATCAAAGATTCTGACTATTGGAAAGAACTCGGCACCTTCTGCAAACAATATGGTCTATCTCAAGGACCAAAGGAAGAGAAGAAGAAGAAAAAGAAAAGGCAAGTTAAAGATCAAGAGTCTCCTCAAAGAAGAAGGCATCATTACTACAAGGGCAAAGGCAAGAAGAAATACTCTTCGAAGACCAATACGATATGCTTCAAATGCAATCAGAAAGGTCACTATGCAAACCGTTGTCCCCTAAAGGATAAAATCAATGCCCTAACAATAGATGAAGAGACAAAGCAATCCCTTCTTTACGCCATAAGAACGGATGATGATACCTCCTCTCAAACGGAGTCTTCATCGGAGGAAGACTATATCAATATTCTTCAAGAAGAAGGGTTCTCTTCTGAAGAGGAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAAGATCAAGAAACTCTTTTTGACCTCATCGAGCAGATCCCTGATGAAGAAGCAAAAAGAACTTGCCTCCTCAAATTAAAGCAAAGTTTAGAAGAACAAGTGCCTCAAAAGACGATTCAAAATCCGATTATGTATTCGTACCAAGACATACTGAATCGGGTAAAGGGCCAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAAATCCTCAAGAGAGAAGTTGCTGAAAACAAACAACGACTCATCTACCTTGAAAATGCATTTCAAGCCTTCCAAGAATCCCAAGTTTTGAAAGAAAATTAA

Coding sequence (CDS)

ATGATATGTGTTAATCTCTGCACAGAGAATAAACACACGACGAAGGTGATCAAAGATTCTGACTATTGGAAAGAACTCGGCACCTTCTGCAAACAATATGGTCTATCTCAAGGACCAAAGGAAGAGAAGAAGAAGAAAAAGAAAAGGCAAGTTAAAGATCAAGAGTCTCCTCAAAGAAGAAGGCATCATTACTACAAGGGCAAAGGCAAGAAGAAATACTCTTCGAAGACCAATACGATATGCTTCAAATGCAATCAGAAAGGTCACTATGCAAACCGTTGTCCCCTAAAGGATAAAATCAATGCCCTAACAATAGATGAAGAGACAAAGCAATCCCTTCTTTACGCCATAAGAACGGATGATGATACCTCCTCTCAAACGGAGTCTTCATCGGAGGAAGACTATATCAATATTCTTCAAGAAGAAGGGTTCTCTTCTGAAGAGGAATTCTACTCTCAAAGTGACTCAAGCGATGACGAAGGAGCAATACCCTGCACAGGACGATGTGCTGGTAAGTGTTCTGGCCACATTAATGTCATCACCAAAGATCAAGAAACTCTTTTTGACCTCATCGAGCAGATCCCTGATGAAGAAGCAAAAAGAACTTGCCTCCTCAAATTAAAGCAAAGTTTAGAAGAACAAGTGCCTCAAAAGACGATTCAAAATCCGATTATGTATTCGTACCAAGACATACTGAATCGGGTAAAGGGCCAAGCAAAAATACCCATTCAAGTTGAAGATCTTCATCATGAGGTAAAAATCCTCAAGAGAGAAGTTGCTGAAAACAAACAACGACTCATCTACCTTGAAAATGCATTTCAAGCCTTCCAAGAATCCCAAGTTTTGAAAGAAAATTAA

Protein sequence

MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKRQVKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQSLLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCAGKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDILNRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN

Homology

[Close]

BLAST of MELO3C026405 vs. NCBI nr
Match: TYK28079.1 (hypothetical protein E5676_scaffold384G003430 [Cucumis melo var. makuwa])

HSP 1 Score: 525.4 bits (1352), Expect = 3.1e-145
Identity = 272/295 (92.20%), Postives = 279/295 (94.58%), Query Frame = 0


Query: 1   MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKR----------Q 60
           MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKR          +
Sbjct: 1   MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSK 60

Query: 61  VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 120
            KDQESPQRR+ HY KGK KK YSSKT+TICFKCNQKGHYANRCPLKDKINA+TIDEETK
Sbjct: 61  TKDQESPQRRKRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETK 120

Query: 121 QSLLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCA 180
           QSLLYAIR+DDDT+SQTESSSEEDYINILQEEG SSEEEFYSQSDSSDDEGAIPCTGRCA
Sbjct: 121 QSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCA 180

Query: 181 GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD 240
           GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD
Sbjct: 181 GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD 240

Query: 241 ILNRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN 286
           ILNRVKG+AKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN
Sbjct: 241 ILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN 295

[Close]

BLAST of MELO3C026405 vs. NCBI nr
Match: TYJ98087.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 522.7 bits (1345), Expect = 2.0e-144
Identity = 274/295 (92.88%), Postives = 277/295 (93.90%), Query Frame = 0


Query: 1    MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKR----------Q 60
            MI VNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKKR          +
Sbjct: 838  MINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKGK 897

Query: 61   VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 120
            VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK
Sbjct: 898  VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 957

Query: 121  QSLLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCA 180
            QSLLYAIR DDDTSSQTESSSEEDYINILQEEG SSEEEFYSQSDSSDDEGAIPCTGRCA
Sbjct: 958  QSLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCA 1017

Query: 181  GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD 240
            GKCSGHINVITKDQETLF LIEQIPDEEAKRTCLLKLKQSLEEQ PQK IQNPIMYSYQD
Sbjct: 1018 GKCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQD 1077

Query: 241  ILNRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN 286
            ILNRVKG+AK+PIQVEDLHHEVK LKREVAENKQRLIYLENAFQAFQESQVLKEN
Sbjct: 1078 ILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKEN 1132

[Close]

BLAST of MELO3C026405 vs. NCBI nr
Match: KAA0052109.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 522.7 bits (1345), Expect = 2.0e-144
Identity = 274/295 (92.88%), Postives = 277/295 (93.90%), Query Frame = 0


Query: 1    MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKR----------Q 60
            MI VNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKKR          +
Sbjct: 838  MINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKGK 897

Query: 61   VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 120
            VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK
Sbjct: 898  VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 957

Query: 121  QSLLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCA 180
            QSLLYAIR DDDTSSQTESSSEEDYINILQEEG SSEEEFYSQSDSSDDEGAIPCTGRCA
Sbjct: 958  QSLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCA 1017

Query: 181  GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD 240
            GKCSGHINVITKDQETLF LIEQIPDEEAKRTCLLKLKQSLEEQ PQK IQNPIMYSYQD
Sbjct: 1018 GKCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQD 1077

Query: 241  ILNRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN 286
            ILNRVKG+AK+PIQVEDLHHEVK LKREVAENKQRLIYLENAFQAFQESQVLKEN
Sbjct: 1078 ILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKEN 1132

[Close]

BLAST of MELO3C026405 vs. NCBI nr
Match: KAA0068171.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 506.1 bits (1302), Expect = 1.9e-139
Identity = 264/292 (90.41%), Postives = 272/292 (93.15%), Query Frame = 0


Query: 1   MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKK--------RQVK 60
           MICVNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKK        R+ K
Sbjct: 71  MICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSRKFFRKNK 130

Query: 61  DQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQS 120
           DQESP RRR HYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALT+DEETKQS
Sbjct: 131 DQESPPRRRRHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTVDEETKQS 190

Query: 121 LLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCAGK 180
           LLYAIRTDD+TSSQTESSSEED INILQEE  S EEEFYSQS+SSDDEGAIPCTGRCAGK
Sbjct: 191 LLYAIRTDDETSSQTESSSEEDCINILQEEESSFEEEFYSQSNSSDDEGAIPCTGRCAGK 250

Query: 181 CSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDIL 240
           CSGHINVITKDQETLFDLIEQIPDE AKRTCLLKLKQSLEEQ PQKTIQNPIMYSYQDIL
Sbjct: 251 CSGHINVITKDQETLFDLIEQIPDEGAKRTCLLKLKQSLEEQAPQKTIQNPIMYSYQDIL 310

Query: 241 NRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 285
           NRVKG+AK+PIQVEDLHHEVKILK+EVAENKQRLIYLE AFQAFQ+SQ LKE
Sbjct: 311 NRVKGEAKVPIQVEDLHHEVKILKKEVAENKQRLIYLETAFQAFQKSQALKE 362

[Close]

BLAST of MELO3C026405 vs. NCBI nr
Match: TYK21091.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 506.1 bits (1302), Expect = 1.9e-139
Identity = 264/292 (90.41%), Postives = 272/292 (93.15%), Query Frame = 0


Query: 1   MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKK--------RQVK 60
           MICVNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKK        R+ K
Sbjct: 71  MICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSRKFFRKNK 130

Query: 61  DQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQS 120
           DQESP RRR HYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALT+DEETKQS
Sbjct: 131 DQESPPRRRRHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTVDEETKQS 190

Query: 121 LLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCAGK 180
           LLYAIRTDD+TSSQTESSSEED INILQEE  S EEEFYSQS+SSDDEGAIPCTGRCAGK
Sbjct: 191 LLYAIRTDDETSSQTESSSEEDCINILQEEESSFEEEFYSQSNSSDDEGAIPCTGRCAGK 250

Query: 181 CSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDIL 240
           CSGHINVITKDQETLFDLIEQIPDE AKRTCLLKLKQSLEEQ PQKTIQNPIMYSYQDIL
Sbjct: 251 CSGHINVITKDQETLFDLIEQIPDEGAKRTCLLKLKQSLEEQAPQKTIQNPIMYSYQDIL 310

Query: 241 NRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 285
           NRVKG+AK+PIQVEDLHHEVKILK+EVAENKQRLIYLE AFQAFQ+SQ LKE
Sbjct: 311 NRVKGEAKVPIQVEDLHHEVKILKKEVAENKQRLIYLETAFQAFQKSQALKE 362

[Close]

BLAST of MELO3C026405 vs. ExPASy TrEMBL
Match: A0A5D3DXC4 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003430 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 272/295 (92.20%), Postives = 279/295 (94.58%), Query Frame = 0


Query: 1   MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKR----------Q 60
           MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKR          +
Sbjct: 1   MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKSK 60

Query: 61  VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 120
            KDQESPQRR+ HY KGK KK YSSKT+TICFKCNQKGHYANRCPLKDKINA+TIDEETK
Sbjct: 61  TKDQESPQRRKRHYNKGKSKKGYSSKTHTICFKCNQKGHYANRCPLKDKINAMTIDEETK 120

Query: 121 QSLLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCA 180
           QSLLYAIR+DDDT+SQTESSSEEDYINILQEEG SSEEEFYSQSDSSDDEGAIPCTGRCA
Sbjct: 121 QSLLYAIRSDDDTTSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCA 180

Query: 181 GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD 240
           GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD
Sbjct: 181 GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD 240

Query: 241 ILNRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN 286
           ILNRVKG+AKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN
Sbjct: 241 ILNRVKGEAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN 295

[Close]

BLAST of MELO3C026405 vs. ExPASy TrEMBL
Match: A0A5D3BG41 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold565G00200 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.6e-145
Identity = 274/295 (92.88%), Postives = 277/295 (93.90%), Query Frame = 0


Query: 1    MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKR----------Q 60
            MI VNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKKR          +
Sbjct: 838  MINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKGK 897

Query: 61   VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 120
            VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK
Sbjct: 898  VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 957

Query: 121  QSLLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCA 180
            QSLLYAIR DDDTSSQTESSSEEDYINILQEEG SSEEEFYSQSDSSDDEGAIPCTGRCA
Sbjct: 958  QSLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCA 1017

Query: 181  GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD 240
            GKCSGHINVITKDQETLF LIEQIPDEEAKRTCLLKLKQSLEEQ PQK IQNPIMYSYQD
Sbjct: 1018 GKCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQD 1077

Query: 241  ILNRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN 286
            ILNRVKG+AK+PIQVEDLHHEVK LKREVAENKQRLIYLENAFQAFQESQVLKEN
Sbjct: 1078 ILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKEN 1132

[Close]

BLAST of MELO3C026405 vs. ExPASy TrEMBL
Match: A0A5A7UF59 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00970 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.6e-145
Identity = 274/295 (92.88%), Postives = 277/295 (93.90%), Query Frame = 0


Query: 1    MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKKR----------Q 60
            MI VNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKKR          +
Sbjct: 838  MINVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSKKFFRKGK 897

Query: 61   VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 120
            VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK
Sbjct: 898  VKDQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETK 957

Query: 121  QSLLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCA 180
            QSLLYAIR DDDTSSQTESSSEEDYINILQEEG SSEEEFYSQSDSSDDEGAIPCTGRCA
Sbjct: 958  QSLLYAIRMDDDTSSQTESSSEEDYINILQEEGSSSEEEFYSQSDSSDDEGAIPCTGRCA 1017

Query: 181  GKCSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQD 240
            GKCSGHINVITKDQETLF LIEQIPDEEAKRTCLLKLKQSLEEQ PQK IQNPIMYSYQD
Sbjct: 1018 GKCSGHINVITKDQETLFYLIEQIPDEEAKRTCLLKLKQSLEEQAPQKAIQNPIMYSYQD 1077

Query: 241  ILNRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKEN 286
            ILNRVKG+AK+PIQVEDLHHEVK LKREVAENKQRLIYLENAFQAFQESQVLKEN
Sbjct: 1078 ILNRVKGEAKMPIQVEDLHHEVKTLKREVAENKQRLIYLENAFQAFQESQVLKEN 1132

[Close]

BLAST of MELO3C026405 vs. ExPASy TrEMBL
Match: A0A5D3DBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00570 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 9.3e-140
Identity = 264/292 (90.41%), Postives = 272/292 (93.15%), Query Frame = 0


Query: 1   MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKK--------RQVK 60
           MICVNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKK        R+ K
Sbjct: 71  MICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSRKFFRKNK 130

Query: 61  DQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQS 120
           DQESP RRR HYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALT+DEETKQS
Sbjct: 131 DQESPPRRRRHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTVDEETKQS 190

Query: 121 LLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCAGK 180
           LLYAIRTDD+TSSQTESSSEED INILQEE  S EEEFYSQS+SSDDEGAIPCTGRCAGK
Sbjct: 191 LLYAIRTDDETSSQTESSSEEDCINILQEEESSFEEEFYSQSNSSDDEGAIPCTGRCAGK 250

Query: 181 CSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDIL 240
           CSGHINVITKDQETLFDLIEQIPDE AKRTCLLKLKQSLEEQ PQKTIQNPIMYSYQDIL
Sbjct: 251 CSGHINVITKDQETLFDLIEQIPDEGAKRTCLLKLKQSLEEQAPQKTIQNPIMYSYQDIL 310

Query: 241 NRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 285
           NRVKG+AK+PIQVEDLHHEVKILK+EVAENKQRLIYLE AFQAFQ+SQ LKE
Sbjct: 311 NRVKGEAKVPIQVEDLHHEVKILKKEVAENKQRLIYLETAFQAFQKSQALKE 362

[Close]

BLAST of MELO3C026405 vs. ExPASy TrEMBL
Match: A0A5A7VRE0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001400 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 9.3e-140
Identity = 264/292 (90.41%), Postives = 272/292 (93.15%), Query Frame = 0


Query: 1   MICVNLCTENKHTTKVIKDSDYWKELGTFCKQYGLSQGPKEEKKKKKK--------RQVK 60
           MICVNLCTENKHTTKVIKDSDY KELGTFCKQYGLSQGPKEEKKKKKK        R+ K
Sbjct: 71  MICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQGPKEEKKKKKKRYSSRKFFRKNK 130

Query: 61  DQESPQRRRHHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTIDEETKQS 120
           DQESP RRR HYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALT+DEETKQS
Sbjct: 131 DQESPPRRRRHYYKGKGKKKYSSKTNTICFKCNQKGHYANRCPLKDKINALTVDEETKQS 190

Query: 121 LLYAIRTDDDTSSQTESSSEEDYINILQEEGFSSEEEFYSQSDSSDDEGAIPCTGRCAGK 180
           LLYAIRTDD+TSSQTESSSEED INILQEE  S EEEFYSQS+SSDDEGAIPCTGRCAGK
Sbjct: 191 LLYAIRTDDETSSQTESSSEEDCINILQEEESSFEEEFYSQSNSSDDEGAIPCTGRCAGK 250

Query: 181 CSGHINVITKDQETLFDLIEQIPDEEAKRTCLLKLKQSLEEQVPQKTIQNPIMYSYQDIL 240
           CSGHINVITKDQETLFDLIEQIPDE AKRTCLLKLKQSLEEQ PQKTIQNPIMYSYQDIL
Sbjct: 251 CSGHINVITKDQETLFDLIEQIPDEGAKRTCLLKLKQSLEEQAPQKTIQNPIMYSYQDIL 310

Query: 241 NRVKGQAKIPIQVEDLHHEVKILKREVAENKQRLIYLENAFQAFQESQVLKE 285
           NRVKG+AK+PIQVEDLHHEVKILK+EVAENKQRLIYLE AFQAFQ+SQ LKE
Sbjct: 311 NRVKGEAKVPIQVEDLHHEVKILKKEVAENKQRLIYLETAFQAFQKSQALKE 362

The following BLAST results are available for this feature:

BLAST of MELO3C026405 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28079.1	3.1e-145	92.20	hypothetical protein E5676_scaffold384G003430 [Cucumis melo var. makuwa]	[more]
TYJ98087.1	2.0e-144	92.88	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0052109.1	2.0e-144	92.88	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0068171.1	1.9e-139	90.41	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
TYK21091.1	1.9e-139	90.41	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C026405 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C026405 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DXC4	1.5e-145	92.20	CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5D3BG41	9.6e-145	92.88	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold56...	[more]
A0A5A7UF59	9.6e-145	92.88	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5D3DBS1	9.3e-140	90.41	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39...	[more]
A0A5A7VRE0	9.3e-140	90.41	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold23...	[more]

BLAST of MELO3C026405 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 245..265
None	No IPR available	GENE3D	4.10.60.10		coord: 73..129 e-value: 7.2E-7 score: 31.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..71
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 18..282
None	No IPR available	PANTHER	PTHR46249:SF33	VIRAL MOVEMENT PROTEIN-RELATED	coord: 18..282
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 80..96 e-value: 0.0051 score: 25.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 81..95 e-value: 5.8E-5 score: 23.0
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 81..95 score: 9.982374
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 67..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026405.1	MELO3C026405.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding