MELO3C026289.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C026289.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	homeobox protein knotted-1-like 2
Location	chr02: 24094949 .. 24096078 (+)
RNA-Seq Expression	MELO3C026289.jh1
Synteny	MELO3C026289.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGCTAACTCTTATCACTCATCATCAACGACGACGTTGGAGACTCTTCCCATTCCGACGCATTCTGCGGATTATTCTCACCCTCTTCCGGATTTTGAAGCCGAACATTCCAGGCCGTTTTCGTCCGTGGCCTCCAAAACTGCTATTACGGCGGAGACGAAAACAGCTTGTGCTATTCCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTGGTTTAGTTTTCTATTATGAGATCTAAGAACGCGACATTTTTAAGGTTTAAAGAATGCAATAATGCTCGCGCTTTTTGGATGTTGAGGAACGAAGGAAAATTCTTAAAAATTGGTGTGAATTATAATTTATCTACACCGATAATGTGGTTGACTATGCCAAACTTATAATTCAGTAGTTTTACATTTGTTTTCATCTTCAATGTGAAGTTTTAGTTCATTTCCATTTTCCAAGAGTAAGATTCCAGTAAATCGCATCTCAGCTAGGGGAAAAACGAAACGAAACCTGATGATACCTAGCTAGTCGGAAAATCAACAGTAGTTTCGAATCCAAATTCTGCGAGCTACAGTTTAATTTGTTTCAGGTGTAGATTCGTTAGTTTTTTTTATTCAATCCTTTATGGCCTTTTCAGGTCGGCGCGCCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCATCGGCAAAGAAAATCCCTGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTCGACGAATTCATGGTATTTAACCTCGCTTTGCTTTGACCGGTGATTGAACATTAGATAGTTTATACTTTTATTAGTTTAATTTACAATTTCAAACAGAGAATAATCTGCGGGCTATTAGCCAAATACGAGCTGGATCTGTGTCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGAAATGCAGTTAAATTTGCTCTGCGAGGGCACCAACAGAGGCTACGTTTCCTCCGGTTCGTCATTCTCCCTCTCTTTCATAATAAGACAATCTGTTGATTTGATTTCTTATTTTATTGAGTAA

mRNA sequence

ATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGCTAACTCTTATCACTCATCATCAACGACGACGTTGGAGACTCTTCCCATTCCGACGCATTCTGCGGATTATTCTCACCCTCTTCCGGATTTTGAAGCCGAACATTCCAGGCCGTTTTCGTCCGTGGCCTCCAAAACTGCTATTACGGCGGAGACGAAAACAGCTTGTGCTATTCCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTCGGCGCGCCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCATCGGCAAAGAAAATCCCTGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTCGACGAATTCATGAGAATAATCTGCGGGCTATTAGCCAAATACGAGCTGGATCTGTGTCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGAAATGCAGTTAAATTTGCTCTGCGAGGGCACCAACAGAGGCTACGTTTCCTCCGGTTCGTCATTCTCCCTCTCTTTCATAATAAGACAATCTGTTGATTTGATTTCTTATTTTATTGAGTAA

Coding sequence (CDS)

ATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGCTAACTCTTATCACTCATCATCAACGACGACGTTGGAGACTCTTCCCATTCCGACGCATTCTGCGGATTATTCTCACCCTCTTCCGGATTTTGAAGCCGAACATTCCAGGCCGTTTTCGTCCGTGGCCTCCAAAACTGCTATTACGGCGGAGACGAAAACAGCTTGTGCTATTCCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTCGGCGCGCCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCATCGGCAAAGAAAATCCCTGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTCGACGAATTCATGAGAATAATCTGCGGGCTATTAGCCAAATACGAGCTGGATCTGTGTCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGAAATGCAGTTAAATTTGCTCTGCGAGGGCACCAACAGAGGCTACGTTTCCTCCGGTTCGTCATTCTCCCTCTCTTTCATAATAAGACAATCTGTTGATTTGATTTCTTATTTTATTGAGTAA

Protein sequence

MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAITAETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEGTNRGYVSSGSSFSLSFIIRQSVDLISYFIE

Homology

[Close]

BLAST of MELO3C026289.jh1 vs. NCBI nr
Match: KAA0057848.1 (homeobox protein knotted-1-like 2 [Cucumis melo var. makuwa] >TYJ98531.1 homeobox protein knotted-1-like 2 [Cucumis melo var. makuwa])

HSP 1 Score: 419 bits (1076), Expect = 1.33e-147
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT
Sbjct: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60

Query: 61  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 120
           AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI
Sbjct: 61  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 120

Query: 121 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 180
           IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG
Sbjct: 121 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 180

Query: 181 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 210
           TNRGYVSSGSSFSLSFIIRQSVDLISYFIE
Sbjct: 181 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 210

[Close]

BLAST of MELO3C026289.jh1 vs. NCBI nr
Match: XP_008464567.1 (PREDICTED: homeobox protein knotted-1-like 2 [Cucumis melo])

HSP 1 Score: 419 bits (1076), Expect = 4.22e-147
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT
Sbjct: 33  MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 92

Query: 61  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 120
           AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI
Sbjct: 93  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 152

Query: 121 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 180
           IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG
Sbjct: 153 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 212

Query: 181 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 210
           TNRGYVSSGSSFSLSFIIRQSVDLISYFIE
Sbjct: 213 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 242

[Close]

BLAST of MELO3C026289.jh1 vs. NCBI nr
Match: KGN63576.2 (hypothetical protein Csa_014294 [Cucumis sativus])

HSP 1 Score: 286 bits (732), Expect = 3.09e-94
Identity = 155/194 (79.90%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLY L+ LA+NS+HSSSTTTLETL I   S+DYSH L DFE+EH  PFSS AS TAI 
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 61  AET-KTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120
           AE  KTACAI EEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
           I G ENP VSTCLGTDPELDEFM I C LLAKYELDL QPLEEAS+FLKNME QLNLLCE
Sbjct: 121 I-GNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE 180

Query: 181 GTNRGYVSSGSSFS 193
            T RGYVS   + S
Sbjct: 181 DTTRGYVSDNEAAS 193

[Close]

BLAST of MELO3C026289.jh1 vs. NCBI nr
Match: XP_011656688.1 (homeobox protein knotted-1-like 2 isoform X3 [Cucumis sativus])

HSP 1 Score: 285 bits (730), Expect = 6.42e-94
Identity = 154/189 (81.48%), Postives = 161/189 (85.19%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLY L+ LA+NS+HSSSTTTLETL I   S+DYSH L DFE+EH  PFSS AS TAI 
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 61  AET-KTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120
           AE  KTACAI EEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
           I G ENP VSTCLGTDPELDEFM I C LLAKYELDL QPLEEAS+FLKNME QLNLLCE
Sbjct: 121 I-GNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE 180

Query: 181 GTNRGYVSS 188
            T RGYVS+
Sbjct: 181 DTTRGYVSA 188

[Close]

BLAST of MELO3C026289.jh1 vs. NCBI nr
Match: XP_004138104.1 (homeobox protein knotted-1-like 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 286 bits (732), Expect = 9.14e-94
Identity = 155/194 (79.90%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLY L+ LA+NS+HSSSTTTLETL I   S+DYSH L DFE+EH  PFSS AS TAI 
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 61  AET-KTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120
           AE  KTACAI EEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
           I G ENP VSTCLGTDPELDEFM I C LLAKYELDL QPLEEAS+FLKNME QLNLLCE
Sbjct: 121 I-GNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE 180

Query: 181 GTNRGYVSSGSSFS 193
            T RGYVS   + S
Sbjct: 181 DTTRGYVSDNEAAS 193

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 5.8e-27
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 25  TLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAITAETKTACAIPEEE-SAGVIRAKIA 84
           TL +P   +DY   +     ++ R F S    TA+++E        E+  S  VI++KIA
Sbjct: 18  TLMMP---SDYQSLICSTTGDNQRLFGSDELATALSSELLPRIRKAEDNFSLSVIKSKIA 77

Query: 85  SHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMR 144
           SHPLYP+L+  +++CQKVGAP E+A IL++  R N++  K +    +C G DPELDEFM 
Sbjct: 78  SHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVY-KRDVAPLSCFGADPELDEFME 137

Query: 145 IICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 181
             C +L KY+ DL +P +EA++F+  +EMQL  LC G
Sbjct: 138 TYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTG 170

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-26
Identity = 79/201 (39.30%), Postives = 109/201 (54.23%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEH--SRPF-SSVASKT 60
           M G+Y  H     S  S    + E+L  P   +DY   L     E+  S  F S      
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFP---SDYQALLCSSAGENRVSDVFGSDELLSV 60

Query: 61  AITAETKTACAIPEE-------ESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKI 120
           A++A +  A +I  E        S  VI+AKIA HP YP+L+ A+++CQKVGAPPE+A +
Sbjct: 61  AVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACL 120

Query: 121 LDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNM 180
           L++  R +++  K+    S+C G DPELDEFM   C +L KY+ DL +P +EA+ FL  +
Sbjct: 121 LEEIQRESDVY-KQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKI 180

Query: 181 EMQLNLLCEGTN--RGYVSSG 190
           EMQL  LC G    RG    G
Sbjct: 181 EMQLRNLCTGVESARGVSEDG 197

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy Swiss-Prot
Match: P46608 (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.0e-20
Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 74  SAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPE-VAKILDQCNRGNNIIGKENPCVSTCL 133
           S+  ++AKI +HP Y +L+ A++NCQKVGAPPE VA++ + C     + G +    S+C+
Sbjct: 120 SSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCI 179

Query: 134 GTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLC-----EGTNRGYVS 192
           G DP LD+FM   C +L KYE +L +PL+EA  FL+ +E Q   L        +N G   
Sbjct: 180 GEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFASNEGGDR 239

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy Swiss-Prot
Match: Q9FP29 (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19
Identity = 46/104 (44.23%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 77  VIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDP 136
           +++A+IA HP YP L+ A++ C+KVGAPPEVA +L +  R     G         +G DP
Sbjct: 42  LMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQ--IGVDP 101

Query: 137 ELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 181
           ELDEFM   C +L +Y+ +L +P +EA+SFL +++ QL+ LC G
Sbjct: 102 ELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSG 143

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy Swiss-Prot
Match: Q38874 (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.9e-18
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 74  SAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPE-VAKILDQCNRGNNIIGKENPCVSTCL 133
           S+  ++AKI +HP Y +L+ A++NCQKVGAPPE VA++ + C+          P  + CL
Sbjct: 117 SSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGP--TGCL 176

Query: 134 GTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEGTNRGYVSSGSSF 193
           G DP LD+FM   C +L KYE +L +P +EA  FL+ +E Q   L        +SS SSF
Sbjct: 177 GEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLS-------LSSPSSF 228

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy TrEMBL
Match: A0A5A7URR0 (Homeobox protein knotted-1-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001370 PE=4 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 6.46e-148
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT
Sbjct: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60

Query: 61  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 120
           AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI
Sbjct: 61  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 120

Query: 121 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 180
           IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG
Sbjct: 121 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 180

Query: 181 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 210
           TNRGYVSSGSSFSLSFIIRQSVDLISYFIE
Sbjct: 181 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 210

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CLY2 (homeobox protein knotted-1-like 2 OS=Cucumis melo OX=3656 GN=LOC103502408 PE=4 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 2.04e-147
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT
Sbjct: 33  MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 92

Query: 61  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 120
           AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI
Sbjct: 93  AETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI 152

Query: 121 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 180
           IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG
Sbjct: 153 IGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 212

Query: 181 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 210
           TNRGYVSSGSSFSLSFIIRQSVDLISYFIE
Sbjct: 213 TNRGYVSSGSSFSLSFIIRQSVDLISYFIE 242

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LU96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004870 PE=3 SV=1)

HSP 1 Score: 286 bits (732), Expect = 4.42e-94
Identity = 155/194 (79.90%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAIT 60
           MAGLY L+ LA+NS+HSSSTTTLETL I   S+DYSH L DFE+EH  PFSS AS TAI 
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 61  AET-KTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120
           AE  KTACAI EEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
           I G ENP VSTCLGTDPELDEFM I C LLAKYELDL QPLEEAS+FLKNME QLNLLCE
Sbjct: 121 I-GNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCE 180

Query: 181 GTNRGYVSSGSSFS 193
            T RGYVS   + S
Sbjct: 181 DTTRGYVSDNEAAS 193

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EK44 (homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111435282 PE=3 SV=1)

HSP 1 Score: 198 bits (503), Expect = 2.59e-59
Identity = 114/194 (58.76%), Postives = 130/194 (67.01%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIP-------THSADYSHPLPDFEAEHSRPFSSV 60
           MA LYGLHPLA  SY SSS   L+ L +P       T S+DYSHPL  F + H    SS 
Sbjct: 1   MADLYGLHPLADYSYESSSAAPLDNLLVPVNYQAYSTASSDYSHPLQVFGSGHVPSVSSG 60

Query: 61  ASKTAITAETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQ 120
               A+ A       + EEESAG IR KIASHPLYP+LVDAF++CQK+GAPPEVA IL +
Sbjct: 61  DYDAALVA------VVSEEESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 CNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQ 180
             RG++I G+    VST LG DPELDEFM   CG+LAKY+LDL  P  EASSFL NME Q
Sbjct: 121 SLRGSDI-GERTSSVSTRLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQ 180

Query: 181 LNLLCEGTNRGYVS 187
           LN LC GT RGYVS
Sbjct: 181 LNRLCNGTTRGYVS 187

[Close]

BLAST of MELO3C026289.jh1 vs. ExPASy TrEMBL
Match: A0A6J1KV29 (homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111497855 PE=3 SV=1)

HSP 1 Score: 195 bits (495), Expect = 4.02e-58
Identity = 113/194 (58.25%), Postives = 128/194 (65.98%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIP-------THSADYSHPLPDFEAEHSRPFSSV 60
           MA LYGLHPLA  SY SSS   L+ L +P       T SADYSH L  F + H    SS 
Sbjct: 1   MADLYGLHPLADYSYESSSAAPLDNLLVPVNFQAYSTASADYSHWLQVFGSGHVPSVSSG 60

Query: 61  ASKTAITAETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQ 120
               A+         + EEESAG IR KIASHPLYP+LVDAF++CQK+GAPPEVA IL +
Sbjct: 61  DYDAALAV-------VSEEESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILGR 120

Query: 121 CNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQ 180
             RG +I G+    VSTCLG DPELDEFM   CG+LAKY+LDL  P  EASSFL NME Q
Sbjct: 121 SVRGRDI-GERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQ 180

Query: 181 LNLLCEGTNRGYVS 187
           L+ LC GT RGYVS
Sbjct: 181 LSSLCNGTTRGYVS 186

[Close]

BLAST of MELO3C026289.jh1 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-28
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 25  TLPIPTHSADYSHPLPDFEAEHSRPFSSVASKTAITAETKTACAIPEEE-SAGVIRAKIA 84
           TL +P   +DY   +     ++ R F S    TA+++E        E+  S  VI++KIA
Sbjct: 18  TLMMP---SDYQSLICSTTGDNQRLFGSDELATALSSELLPRIRKAEDNFSLSVIKSKIA 77

Query: 85  SHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMR 144
           SHPLYP+L+  +++CQKVGAP E+A IL++  R N++  K +    +C G DPELDEFM 
Sbjct: 78  SHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVY-KRDVAPLSCFGADPELDEFME 137

Query: 145 IICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEG 181
             C +L KY+ DL +P +EA++F+  +EMQL  LC G
Sbjct: 138 TYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTG 170

[Close]

BLAST of MELO3C026289.jh1 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-27
Identity = 79/201 (39.30%), Postives = 109/201 (54.23%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEH--SRPF-SSVASKT 60
           M G+Y  H     S  S    + E+L  P   +DY   L     E+  S  F S      
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFP---SDYQALLCSSAGENRVSDVFGSDELLSV 60

Query: 61  AITAETKTACAIPEE-------ESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKI 120
           A++A +  A +I  E        S  VI+AKIA HP YP+L+ A+++CQKVGAPPE+A +
Sbjct: 61  AVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACL 120

Query: 121 LDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNM 180
           L++  R +++  K+    S+C G DPELDEFM   C +L KY+ DL +P +EA+ FL  +
Sbjct: 121 LEEIQRESDVY-KQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKI 180

Query: 181 EMQLNLLCEGTN--RGYVSSG 190
           EMQL  LC G    RG    G
Sbjct: 181 EMQLRNLCTGVESARGVSEDG 197

[Close]

BLAST of MELO3C026289.jh1 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 114.8 bits (286), Expect = 8.6e-26
Identity = 79/203 (38.92%), Postives = 109/203 (53.69%), Query Frame = 0


Query: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEH--SRPF-SSVASKT 60
           M G+Y  H     S  S    + E+L  P   +DY   L     E+  S  F S      
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFP---SDYQALLCSSAGENRVSDVFGSDELLSV 60

Query: 61  AITAETKTACAIPEE-------ESAGVIRAKIASHPLYPKLVDAFLNCQK--VGAPPEVA 120
           A++A +  A +I  E        S  VI+AKIA HP YP+L+ A+++CQK  VGAPPE+A
Sbjct: 61  AVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIA 120

Query: 121 KILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLK 180
            +L++  R +++  K+    S+C G DPELDEFM   C +L KY+ DL +P +EA+ FL 
Sbjct: 121 CLLEEIQRESDVY-KQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLN 180

Query: 181 NMEMQLNLLCEGTN--RGYVSSG 190
            +EMQL  LC G    RG    G
Sbjct: 181 KIEMQLRNLCTGVESARGVSEDG 199

[Close]

BLAST of MELO3C026289.jh1 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 93.6 bits (231), Expect = 2.0e-19
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 74  SAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPE-VAKILDQCNRGNNIIGKENPCVSTCL 133
           S+  ++AKI +HP Y +L+ A++NCQKVGAPPE VA++ + C+          P  + CL
Sbjct: 117 SSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGP--TGCL 176

Query: 134 GTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCEGTNRGYVSSGSSF 193
           G DP LD+FM   C +L KYE +L +P +EA  FL+ +E Q   L        +SS SSF
Sbjct: 177 GEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLS-------LSSPSSF 228

[Close]

BLAST of MELO3C026289.jh1 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-17
Identity = 38/102 (37.25%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 78  IRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPE 137
           ++AKI +HP Y  L+ A+L+CQK+GAPP+V   +    +      + +    +    DPE
Sbjct: 134 MKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPE 193

Query: 138 LDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180
           LD+FM   C +L KY  +L +P++EA  F++ +E QL++LC+
Sbjct: 194 LDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQ 235

The following BLAST results are available for this feature:

BLAST of MELO3C026289.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057848.1	1.33e-147	100.00	homeobox protein knotted-1-like 2 [Cucumis melo var. makuwa] >TYJ98531.1 homeobo...	[more]
XP_008464567.1	4.22e-147	100.00	PREDICTED: homeobox protein knotted-1-like 2 [Cucumis melo]	[more]
KGN63576.2	3.09e-94	79.90	hypothetical protein Csa_014294 [Cucumis sativus]	[more]
XP_011656688.1	6.42e-94	81.48	homeobox protein knotted-1-like 2 isoform X3 [Cucumis sativus]	[more]
XP_004138104.1	9.14e-94	79.90	homeobox protein knotted-1-like 2 isoform X2 [Cucumis sativus]	[more]

BLAST of MELO3C026289.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46640	5.8e-27	42.04	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
Q84JS6	3.7e-26	39.30	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
P46608	4.0e-20	41.94	Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1	[more]
Q9FP29	1.2e-19	44.23	Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS...	[more]
Q38874	2.9e-18	42.98	Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ...	[more]

BLAST of MELO3C026289.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7URR0	6.46e-148	100.00	Homeobox protein knotted-1-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CLY2	2.04e-147	100.00	homeobox protein knotted-1-like 2 OS=Cucumis melo OX=3656 GN=LOC103502408 PE=4 S...	[more]
A0A0A0LU96	4.42e-94	79.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004870 PE=3 SV=1	[more]
A0A6J1EK44	2.59e-59	58.76	homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111435282 ...	[more]
A0A6J1KV29	4.02e-58	58.25	homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111497855 PE...	[more]

BLAST of MELO3C026289.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70510.1	4.1e-28	42.04	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT1G23380.1	2.7e-27	39.30	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	8.6e-26	38.92	KNOTTED1-like homeobox gene 6	[more]
AT1G62360.1	2.0e-19	42.98	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	1.5e-17	37.25	KNOTTED-like from Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 76..120 e-value: 5.5E-16 score: 69.1
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 78..116 e-value: 1.1E-18 score: 66.7
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 128..179 e-value: 5.4E-14 score: 62.5
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 132..178 e-value: 8.4E-17 score: 60.4
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 1..188
None	No IPR available	PANTHER	PTHR11850:SF292	ELK DOMAIN, HOMEOBOX KN DOMAIN, HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026289.jh1.t1	MELO3C026289.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding